RNA–Protein interactions for RNA: ENST00000585161.1

CDK12-210, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 2,036 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-210ENST00000585161 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
CDK12-210ENST00000585161 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
CDK12-210ENST00000585161 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
CDK12-210ENST00000585161 CDC42BPAQ5VT25 1732 aa17.4■□□□□ 0.38
CDK12-210ENST00000585161 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
CDK12-210ENST00000585161 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
CDK12-210ENST00000585161 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
CDK12-210ENST00000585161 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
CDK12-210ENST00000585161 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
CDK12-210ENST00000585161 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
CDK12-210ENST00000585161 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
CDK12-210ENST00000585161 RGS3P49796 1198 aa17.38■□□□□ 0.37
CDK12-210ENST00000585161 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
CDK12-210ENST00000585161 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
CDK12-210ENST00000585161 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
CDK12-210ENST00000585161 RRAGDQ9NQL2 400 aaPredicted RBP17.37■□□□□ 0.37
CDK12-210ENST00000585161 CLCN1P35523 988 aa17.36■□□□□ 0.37
CDK12-210ENST00000585161 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
CDK12-210ENST00000585161 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
CDK12-210ENST00000585161 TRIM52Q96A61 297 aa17.33■□□□□ 0.37
CDK12-210ENST00000585161 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
CDK12-210ENST00000585161 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
CDK12-210ENST00000585161 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
CDK12-210ENST00000585161 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
CDK12-210ENST00000585161 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
CDK12-210ENST00000585161 TPM2P07951 284 aa17.31■□□□□ 0.36
CDK12-210ENST00000585161 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
CDK12-210ENST00000585161 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
CDK12-210ENST00000585161 SAMD9LQ8IVG5 1584 aa17.3■□□□□ 0.36
CDK12-210ENST00000585161 ABCC1P33527 1531 aa17.3■□□□□ 0.36
CDK12-210ENST00000585161 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
CDK12-210ENST00000585161 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
CDK12-210ENST00000585161 SMAP1Q8IYB5 467 aaPredicted RBP17.29■□□□□ 0.36
CDK12-210ENST00000585161 RICTORQ6R327 1708 aa17.29■□□□□ 0.36
CDK12-210ENST00000585161 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
CDK12-210ENST00000585161 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
CDK12-210ENST00000585161 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
CDK12-210ENST00000585161 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.36
CDK12-210ENST00000585161 ARHGEF12Q9NZN5 1544 aa17.27■□□□□ 0.36
CDK12-210ENST00000585161 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
CDK12-210ENST00000585161 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
CDK12-210ENST00000585161 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.36
CDK12-210ENST00000585161 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDK12-210ENST00000585161 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
CDK12-210ENST00000585161 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
CDK12-210ENST00000585161 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
CDK12-210ENST00000585161 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
CDK12-210ENST00000585161 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
CDK12-210ENST00000585161 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
CDK12-210ENST00000585161 SYCP2Q9BX26 1530 aa17.23■□□□□ 0.35
CDK12-210ENST00000585161 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
CDK12-210ENST00000585161 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
CDK12-210ENST00000585161 KDM5CP41229 1560 aa17.23■□□□□ 0.35
CDK12-210ENST00000585161 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
CDK12-210ENST00000585161 PLEKHH2Q8IVE3 1493 aa17.23■□□□□ 0.35
CDK12-210ENST00000585161 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
CDK12-210ENST00000585161 DDRGK1Q96HY6 314 aa17.22■□□□□ 0.35
CDK12-210ENST00000585161 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
CDK12-210ENST00000585161 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
CDK12-210ENST00000585161 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
CDK12-210ENST00000585161 TRAPPC8Q9Y2L5 1435 aa17.22■□□□□ 0.35
CDK12-210ENST00000585161 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
CDK12-210ENST00000585161 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
CDK12-210ENST00000585161 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
CDK12-210ENST00000585161 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
CDK12-210ENST00000585161 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
CDK12-210ENST00000585161 MBD5Q9P267 1494 aa17.2■□□□□ 0.34
CDK12-210ENST00000585161 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
CDK12-210ENST00000585161 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
CDK12-210ENST00000585161 FGD6Q6ZV73 1430 aa17.18■□□□□ 0.34
CDK12-210ENST00000585161 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
CDK12-210ENST00000585161 ARHGEF40Q8TER5 1519 aa17.17■□□□□ 0.34
CDK12-210ENST00000585161 ANP32CO43423 234 aa17.17■□□□□ 0.34
CDK12-210ENST00000585161 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
CDK12-210ENST00000585161 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDK12-210ENST00000585161 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
CDK12-210ENST00000585161 HECW2Q9P2P5 1572 aa17.15■□□□□ 0.34
CDK12-210ENST00000585161 TULP1O00294 542 aaPredicted RBP17.15■□□□□ 0.34
CDK12-210ENST00000585161 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
CDK12-210ENST00000585161 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
CDK12-210ENST00000585161 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
CDK12-210ENST00000585161 ZFYVE16Q7Z3T8 1539 aa17.15■□□□□ 0.34
CDK12-210ENST00000585161 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.34
CDK12-210ENST00000585161 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
CDK12-210ENST00000585161 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
CDK12-210ENST00000585161 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
CDK12-210ENST00000585161 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
CDK12-210ENST00000585161 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
CDK12-210ENST00000585161 TMEM51Q9NW97 253 aa17.1■□□□□ 0.33
CDK12-210ENST00000585161 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
CDK12-210ENST00000585161 DIP2CQ9Y2E4 1556 aa17.1■□□□□ 0.33
CDK12-210ENST00000585161 ADRA2BP18089 450 aa17.09■□□□□ 0.33
CDK12-210ENST00000585161 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
CDK12-210ENST00000585161 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
CDK12-210ENST00000585161 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
CDK12-210ENST00000585161 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
CDK12-210ENST00000585161 TCERG1O14776 1098 aaKnown RBP17.07■□□□□ 0.32
CDK12-210ENST00000585161 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
CDK12-210ENST00000585161 ATP10AO60312 1499 aa17.06■□□□□ 0.32
CDK12-210ENST00000585161 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms