RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, human

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSEN54-208	ENST00000583173	RNF17	Q9BXT8	1623 aa	Known RBP	32.76	■■■□□ 2.83
TSEN54-208	ENST00000583173	FER1L4	A9Z1Z3	1794 aa		32.75	■■■□□ 2.83
TSEN54-208	ENST00000583173	RIMS1	Q86UR5	1692 aa	Known RBP	32.75	■■■□□ 2.83
TSEN54-208	ENST00000583173	ESF1	Q9H501	851 aa	Known RBP	32.74	■■■□□ 2.83
TSEN54-208	ENST00000583173	ZMYM3	Q14202	1370 aa		32.73	■■■□□ 2.83
TSEN54-208	ENST00000583173	CEBPA	P49715	358 aa	Predicted RBP	32.73	■■■□□ 2.83
TSEN54-208	ENST00000583173	MROH1	Q8NDA8	1641 aa		32.73	■■■□□ 2.83
TSEN54-208	ENST00000583173	NAIP	Q13075	1403 aa		32.72	■■■□□ 2.83
TSEN54-208	ENST00000583173	WASHC2C	Q9Y4E1	1318 aa		32.71	■■■□□ 2.83
TSEN54-208	ENST00000583173	FAM135A	Q9P2D6	1515 aa		32.68	■■■□□ 2.82
TSEN54-208	ENST00000583173	KDM5D	Q9BY66	1539 aa		32.67	■■■□□ 2.82
TSEN54-208	ENST00000583173	HFM1	A2PYH4	1435 aa		32.67	■■■□□ 2.82
TSEN54-208	ENST00000583173	DEPDC5	O75140	1603 aa		32.66	■■■□□ 2.82
TSEN54-208	ENST00000583173	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
TSEN54-208	ENST00000583173	PRDM15	P57071	1507 aa	Predicted RBP	32.63	■■■□□ 2.81
TSEN54-208	ENST00000583173	CLTC	Q00610	1675 aa	Known RBP	32.62	■■■□□ 2.81
TSEN54-208	ENST00000583173	VWDE	Q8N2E2	1590 aa		32.62	■■■□□ 2.81
TSEN54-208	ENST00000583173	ABCC3	O15438	1527 aa		32.61	■■■□□ 2.81
TSEN54-208	ENST00000583173	MROH2A	A6NES4	1674 aa		32.61	■■■□□ 2.81
TSEN54-208	ENST00000583173	PLPPR3	Q6T4P5	718 aa		32.59	■■■□□ 2.81
TSEN54-208	ENST00000583173	C3	P01024	1663 aa		32.58	■■■□□ 2.81
TSEN54-208	ENST00000583173	KANK1	Q14678	1352 aa		32.57	■■■□□ 2.8
TSEN54-208	ENST00000583173	LMTK2	Q8IWU2	1503 aa		32.55	■■■□□ 2.8
TSEN54-208	ENST00000583173	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.54	■■■□□ 2.8
TSEN54-208	ENST00000583173	NPAT	Q14207	1427 aa		32.52	■■■□□ 2.8
TSEN54-208	ENST00000583173	UNC13B	O14795	1591 aa		32.52	■■■□□ 2.8
TSEN54-208	ENST00000583173	ARHGAP31	Q2M1Z3	1444 aa		32.51	■■■□□ 2.8
TSEN54-208	ENST00000583173	GCC2	Q8IWJ2	1684 aa		32.51	■■■□□ 2.79
TSEN54-208	ENST00000583173	PZP	P20742	1482 aa		32.51	■■■□□ 2.79
TSEN54-208	ENST00000583173	ZC3H13	Q5T200	1668 aa	Known RBP	32.5	■■■□□ 2.79
TSEN54-208	ENST00000583173	NUP155	O75694	1391 aa		32.49	■■■□□ 2.79
TSEN54-208	ENST00000583173	SETD1B	Q9UPS6	1966 aa	Known RBP	32.48	■■■□□ 2.79
TSEN54-208	ENST00000583173	SETD5	Q9C0A6	1442 aa		32.47	■■■□□ 2.79
TSEN54-208	ENST00000583173	CEP152	O94986	1710 aa		32.46	■■■□□ 2.79
TSEN54-208	ENST00000583173	CAMSAP1	Q5T5Y3	1602 aa		32.41	■■■□□ 2.78
TSEN54-208	ENST00000583173	IQGAP3	Q86VI3	1631 aa		32.39	■■■□□ 2.78
TSEN54-208	ENST00000583173	HRC	P23327	699 aa		32.38	■■■□□ 2.77
TSEN54-208	ENST00000583173	TNR	Q92752	1358 aa		32.37	■■■□□ 2.77
TSEN54-208	ENST00000583173	TRIM26	Q12899	539 aa	Predicted RBP	32.37	■■■□□ 2.77
TSEN54-208	ENST00000583173	LMTK3	Q96Q04	1460 aa		32.36	■■■□□ 2.77
TSEN54-208	ENST00000583173	SPATA31D1	Q6ZQQ2	1576 aa		32.36	■■■□□ 2.77
TSEN54-208	ENST00000583173	EFCAB6	Q5THR3	1501 aa		32.36	■■■□□ 2.77
TSEN54-208	ENST00000583173	ERVK-7	P63135	1459 aa		32.35	■■■□□ 2.77
TSEN54-208	ENST00000583173	TRIM52	Q96A61	297 aa		32.35	■■■□□ 2.77
TSEN54-208	ENST00000583173	RAB3GAP2	Q9H2M9	1393 aa		32.34	■■■□□ 2.77
TSEN54-208	ENST00000583173	ACIN1	Q9UKV3	1341 aa	Known RBP	32.33	■■■□□ 2.77
TSEN54-208	ENST00000583173	TET3	O43151	1660 aa		32.33	■■■□□ 2.77
TSEN54-208	ENST00000583173	RPRD2	Q5VT52	1461 aa	Known RBP	32.32	■■■□□ 2.76
TSEN54-208	ENST00000583173	NOS1	P29475	1434 aa		32.32	■■■□□ 2.76
TSEN54-208	ENST00000583173	UHRF1BP1	Q6BDS2	1440 aa		32.32	■■■□□ 2.76
TSEN54-208	ENST00000583173	PREX1	Q8TCU6	1659 aa		32.28	■■■□□ 2.76
TSEN54-208	ENST00000583173	CFAP65	Q6ZU64	1925 aa	Known RBP	32.26	■■■□□ 2.76
TSEN54-208	ENST00000583173	HSPA2	P54652	639 aa		32.25	■■■□□ 2.75
TSEN54-208	ENST00000583173	MPHOSPH9	Q99550	1183 aa		32.23	■■■□□ 2.75
TSEN54-208	ENST00000583173	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.23	■■■□□ 2.75
TSEN54-208	ENST00000583173		E9PCH4	1651 aa		32.23	■■■□□ 2.75
TSEN54-208	ENST00000583173	NLRP1	Q9C000	1473 aa		32.23	■■■□□ 2.75
TSEN54-208	ENST00000583173	PKD2	Q13563	968 aa		32.22	■■■□□ 2.75
TSEN54-208	ENST00000583173	IDI1	Q13907	227 aa		32.22	■■■□□ 2.75
TSEN54-208	ENST00000583173	A2ML1	A8K2U0	1454 aa		32.22	■■■□□ 2.75
TSEN54-208	ENST00000583173	MYO3A	Q8NEV4	1616 aa		32.2	■■■□□ 2.75
TSEN54-208	ENST00000583173	PTPRT	O14522	1441 aa		32.19	■■■□□ 2.74
TSEN54-208	ENST00000583173	SLC52A1	Q9NWF4	448 aa		32.19	■■■□□ 2.74
TSEN54-208	ENST00000583173	SYNM	O15061	1565 aa		32.18	■■■□□ 2.74
TSEN54-208	ENST00000583173	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.16	■■■□□ 2.74
TSEN54-208	ENST00000583173	PLA2R1	Q13018	1463 aa		32.14	■■■□□ 2.74
TSEN54-208	ENST00000583173	ZNF142	P52746	1687 aa	Predicted RBP	32.14	■■■□□ 2.74
TSEN54-208	ENST00000583173	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.11	■■■□□ 2.73
TSEN54-208	ENST00000583173	FOXD1	Q16676	465 aa		32.09	■■■□□ 2.73
TSEN54-208	ENST00000583173	UGGT1	Q9NYU2	1555 aa		32.07	■■■□□ 2.72
TSEN54-208	ENST00000583173	PIK3C2B	O00750	1634 aa		32.04	■■■□□ 2.72
TSEN54-208	ENST00000583173	UBR1	Q8IWV7	1749 aa		31.99	■■■□□ 2.71
TSEN54-208	ENST00000583173	NCKAP5L	Q9HCH0	1330 aa		31.99	■■■□□ 2.71
TSEN54-208	ENST00000583173	SPHKAP	Q2M3C7	1700 aa		31.98	■■■□□ 2.71
TSEN54-208	ENST00000583173	TRPM2	O94759	1503 aa		31.98	■■■□□ 2.71
TSEN54-208	ENST00000583173	STRC	Q7RTU9	1775 aa		31.98	■■■□□ 2.71
TSEN54-208	ENST00000583173	KDM5A	P29375	1690 aa	Known RBP	31.96	■■■□□ 2.71
TSEN54-208	ENST00000583173	STAG3	Q9UJ98	1225 aa		31.96	■■■□□ 2.71
TSEN54-208	ENST00000583173	ARHGAP23	Q9P227	1491 aa		31.96	■■■□□ 2.71
TSEN54-208	ENST00000583173	ANKLE2	Q86XL3	938 aa		31.95	■■■□□ 2.71
TSEN54-208	ENST00000583173	TMEM2	Q9UHN6	1383 aa		31.94	■■■□□ 2.7
TSEN54-208	ENST00000583173	LTK	P29376	864 aa		31.93	■■■□□ 2.7
TSEN54-208	ENST00000583173	ADGRB3	O60242	1522 aa		31.93	■■■□□ 2.7
TSEN54-208	ENST00000583173	SLIT1	O75093	1534 aa		31.93	■■■□□ 2.7
TSEN54-208	ENST00000583173	TMEM131L	A2VDJ0	1609 aa		31.93	■■■□□ 2.7
TSEN54-208	ENST00000583173	ANKRD30B	Q9BXX2	1392 aa		31.92	■■■□□ 2.7
TSEN54-208	ENST00000583173	PCGF6	Q9BYE7	350 aa		31.9	■■■□□ 2.7
TSEN54-208	ENST00000583173	DMRT2	Q9Y5R5	561 aa		31.9	■■■□□ 2.7
TSEN54-208	ENST00000583173	CLTCL1	P53675	1640 aa		31.89	■■■□□ 2.7
TSEN54-208	ENST00000583173	CHGA	P10645	457 aa	Known RBP	31.88	■■■□□ 2.69
TSEN54-208	ENST00000583173	TXNDC2	Q86VQ3	553 aa		31.88	■■■□□ 2.69
TSEN54-208	ENST00000583173	MED14	O60244	1454 aa		31.85	■■■□□ 2.69
TSEN54-208	ENST00000583173	ZFYVE9	O95405	1425 aa		31.84	■■■□□ 2.69
TSEN54-208	ENST00000583173	EID1	Q9Y6B2	187 aa		31.82	■■■□□ 2.68
TSEN54-208	ENST00000583173	CCDC144A	A2RUR9	1427 aa		31.82	■■■□□ 2.68
TSEN54-208	ENST00000583173	NEURL4	Q96JN8	1562 aa		31.81	■■■□□ 2.68
TSEN54-208	ENST00000583173	SCAF11	Q99590	1463 aa	Known RBP	31.8	■■■□□ 2.68
TSEN54-208	ENST00000583173	RIMS2	Q9UQ26	1411 aa		31.8	■■■□□ 2.68
TSEN54-208	ENST00000583173	MYO5B	Q9ULV0	1848 aa		31.79	■■■□□ 2.68
TSEN54-208	ENST00000583173	HDGF	P51858	240 aa	Known RBP	31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms