RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
CDK5RAP3-224ENST00000582275 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 POLR1AO95602 1720 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 TNRQ92752 1358 aa14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 THEMISQ8N1K5 641 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 CFDP1Q9UEE9 299 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
CDK5RAP3-224ENST00000582275 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-224ENST00000582275 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 MED14O60244 1454 aa14.35□□□□□ -0.11
CDK5RAP3-224ENST00000582275 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 PZPP20742 1482 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 DEPDC5O75140 1603 aa14.33□□□□□ -0.11
CDK5RAP3-224ENST00000582275 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
CDK5RAP3-224ENST00000582275 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-224ENST00000582275 ALKQ9UM73 1620 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 UGGT1Q9NYU2 1555 aa14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 SYNMO15061 1565 aa14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 KIF3BO15066 747 aa14.29□□□□□ -0.12
CDK5RAP3-224ENST00000582275 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
CDK5RAP3-224ENST00000582275 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 LRRC7Q96NW7 1537 aa14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RGS17Q9UGC6 210 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
CDK5RAP3-224ENST00000582275 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
CDK5RAP3-224ENST00000582275 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
CDK5RAP3-224ENST00000582275 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
CDK5RAP3-224ENST00000582275 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-224ENST00000582275 STRCP1A6NGW2 1772 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
CDK5RAP3-224ENST00000582275 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
CDK5RAP3-224ENST00000582275 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ABCC3O15438 1527 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 SLIT1O75093 1534 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ARHGAP23Q9P227 1491 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
CDK5RAP3-224ENST00000582275 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
CDK5RAP3-224ENST00000582275 LTKP29376 864 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-224ENST00000582275 JCADQ9P266 1359 aa14.08□□□□□ -0.16
CDK5RAP3-224ENST00000582275 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 KCNA6P17658 529 aa14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 MSH6P52701 1360 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 TMEM2Q9UHN6 1383 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.17
CDK5RAP3-224ENST00000582275 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 SLAIN2Q9P270 581 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
CDK5RAP3-224ENST00000582275 PHLPP1O60346 1717 aa14□□□□□ -0.17
CDK5RAP3-224ENST00000582275 CEP152O94986 1710 aa13.99□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
CDK5RAP3-224ENST00000582275 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
CDK5RAP3-224ENST00000582275 CDK12Q9NYV4 1490 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-224ENST00000582275 RXRBP28702 533 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms