RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
ATPAF2-211ENST00000581698 HSPA2P54652 639 aa23.39■■□□□ 1.33
ATPAF2-211ENST00000581698 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
ATPAF2-211ENST00000581698 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
ATPAF2-211ENST00000581698 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
ATPAF2-211ENST00000581698 ABCC3O15438 1527 aa23.37■■□□□ 1.33
ATPAF2-211ENST00000581698 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
ATPAF2-211ENST00000581698 NPATQ14207 1427 aa23.36■■□□□ 1.33
ATPAF2-211ENST00000581698 PRDM15P57071 1507 aaPredicted RBP23.35■■□□□ 1.33
ATPAF2-211ENST00000581698 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
ATPAF2-211ENST00000581698 MYO3AQ8NEV4 1616 aa23.34■■□□□ 1.33
ATPAF2-211ENST00000581698 CEP152O94986 1710 aa23.34■■□□□ 1.33
ATPAF2-211ENST00000581698 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
ATPAF2-211ENST00000581698 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
ATPAF2-211ENST00000581698 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
ATPAF2-211ENST00000581698 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
ATPAF2-211ENST00000581698 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
ATPAF2-211ENST00000581698 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
ATPAF2-211ENST00000581698 PZPP20742 1482 aa23.31■■□□□ 1.32
ATPAF2-211ENST00000581698 UHRF1BP1Q6BDS2 1440 aa23.31■■□□□ 1.32
ATPAF2-211ENST00000581698 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
ATPAF2-211ENST00000581698 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
ATPAF2-211ENST00000581698 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
ATPAF2-211ENST00000581698 ANKRD30AQ9BXX3 1397 aa23.28■■□□□ 1.32
ATPAF2-211ENST00000581698 ESF1Q9H501 851 aaKnown RBP23.28■■□□□ 1.32
ATPAF2-211ENST00000581698 CAMSAP1Q5T5Y3 1602 aa23.28■■□□□ 1.32
ATPAF2-211ENST00000581698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.32
ATPAF2-211ENST00000581698 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
ATPAF2-211ENST00000581698 CEP170BQ9Y4F5 1589 aaPredicted RBP23.24■■□□□ 1.31
ATPAF2-211ENST00000581698 SPATA31D1Q6ZQQ2 1576 aa23.23■■□□□ 1.31
ATPAF2-211ENST00000581698 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
ATPAF2-211ENST00000581698 LMTK2Q8IWU2 1503 aa23.21■■□□□ 1.31
ATPAF2-211ENST00000581698 ROCK1Q13464 1354 aa23.2■■□□□ 1.3
ATPAF2-211ENST00000581698 ERVK-7P63135 1459 aa23.19■■□□□ 1.3
ATPAF2-211ENST00000581698 ANKRD50Q9ULJ7 1429 aa23.19■■□□□ 1.3
ATPAF2-211ENST00000581698 UNC13BO14795 1591 aa23.18■■□□□ 1.3
ATPAF2-211ENST00000581698 A2ML1A8K2U0 1454 aa23.17■■□□□ 1.3
ATPAF2-211ENST00000581698 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
ATPAF2-211ENST00000581698 TNRQ92752 1358 aa23.16■■□□□ 1.3
ATPAF2-211ENST00000581698 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
ATPAF2-211ENST00000581698 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
ATPAF2-211ENST00000581698 SYNMO15061 1565 aa23.1■■□□□ 1.29
ATPAF2-211ENST00000581698 ITGAEP38570 1179 aa23.1■■□□□ 1.29
ATPAF2-211ENST00000581698 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
ATPAF2-211ENST00000581698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
ATPAF2-211ENST00000581698 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
ATPAF2-211ENST00000581698 NLRP1Q9C000 1473 aa23.08■■□□□ 1.29
ATPAF2-211ENST00000581698 TET3O43151 1660 aa23.06■■□□□ 1.28
ATPAF2-211ENST00000581698 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
ATPAF2-211ENST00000581698 IQGAP3Q86VI3 1631 aa23.06■■□□□ 1.28
ATPAF2-211ENST00000581698 UBR1Q8IWV7 1749 aa23.05■■□□□ 1.28
ATPAF2-211ENST00000581698 PTPRTO14522 1441 aa23.05■■□□□ 1.28
ATPAF2-211ENST00000581698 NOS1P29475 1434 aa23.05■■□□□ 1.28
ATPAF2-211ENST00000581698 NAIPQ13075 1403 aa23.05■■□□□ 1.28
ATPAF2-211ENST00000581698 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
ATPAF2-211ENST00000581698 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
ATPAF2-211ENST00000581698 E9PCH4 1651 aa23.03■■□□□ 1.28
ATPAF2-211ENST00000581698 PIK3C2BO00750 1634 aa23.02■■□□□ 1.28
ATPAF2-211ENST00000581698 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
ATPAF2-211ENST00000581698 KANK1Q14678 1352 aa23.01■■□□□ 1.27
ATPAF2-211ENST00000581698 LTBP4Q8N2S1 1624 aa22.99■■□□□ 1.27
ATPAF2-211ENST00000581698 HFM1A2PYH4 1435 aa22.97■■□□□ 1.27
ATPAF2-211ENST00000581698 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
ATPAF2-211ENST00000581698 ARHGAP23Q9P227 1491 aa22.95■■□□□ 1.26
ATPAF2-211ENST00000581698 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
ATPAF2-211ENST00000581698 SLIT1O75093 1534 aa22.92■■□□□ 1.26
ATPAF2-211ENST00000581698 MED14O60244 1454 aa22.92■■□□□ 1.26
ATPAF2-211ENST00000581698 PKD2Q13563 968 aa22.91■■□□□ 1.26
ATPAF2-211ENST00000581698 NUP155O75694 1391 aa22.9■■□□□ 1.26
ATPAF2-211ENST00000581698 IDI1Q13907 227 aa22.9■■□□□ 1.26
ATPAF2-211ENST00000581698 MYO5BQ9ULV0 1848 aa22.89■■□□□ 1.26
ATPAF2-211ENST00000581698 ADGRB3O60242 1522 aa22.89■■□□□ 1.26
ATPAF2-211ENST00000581698 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
ATPAF2-211ENST00000581698 ILDR1Q86SU0 546 aaPredicted RBP22.87■■□□□ 1.25
ATPAF2-211ENST00000581698 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
ATPAF2-211ENST00000581698 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
ATPAF2-211ENST00000581698 ZNF335Q9H4Z2 1342 aaPredicted RBP22.85■■□□□ 1.25
ATPAF2-211ENST00000581698 LTKP29376 864 aa22.85■■□□□ 1.25
ATPAF2-211ENST00000581698 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
ATPAF2-211ENST00000581698 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
ATPAF2-211ENST00000581698 NPHP4O75161 1426 aaPredicted RBP22.83■■□□□ 1.25
ATPAF2-211ENST00000581698 SPHKAPQ2M3C7 1700 aa22.82■■□□□ 1.24
ATPAF2-211ENST00000581698 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
ATPAF2-211ENST00000581698 TMEM2Q9UHN6 1383 aa22.82■■□□□ 1.24
ATPAF2-211ENST00000581698 CERKQ8TCT0 537 aa22.82■■□□□ 1.24
ATPAF2-211ENST00000581698 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
ATPAF2-211ENST00000581698 ANKLE2Q86XL3 938 aa22.79■■□□□ 1.24
ATPAF2-211ENST00000581698 CLTCL1P53675 1640 aa22.77■■□□□ 1.24
ATPAF2-211ENST00000581698 SLC52A1Q9NWF4 448 aa22.76■■□□□ 1.23
ATPAF2-211ENST00000581698 TRPM2O94759 1503 aa22.75■■□□□ 1.23
ATPAF2-211ENST00000581698 FBXO41Q8TF61 875 aa22.73■■□□□ 1.23
ATPAF2-211ENST00000581698 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
ATPAF2-211ENST00000581698 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
ATPAF2-211ENST00000581698 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
ATPAF2-211ENST00000581698 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
ATPAF2-211ENST00000581698 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
ATPAF2-211ENST00000581698 CPS1P31327 1500 aa22.65■■□□□ 1.22
ATPAF2-211ENST00000581698 XIRP1Q702N8 1843 aaKnown RBP22.64■■□□□ 1.22
ATPAF2-211ENST00000581698 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.21
ATPAF2-211ENST00000581698 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms