RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
CDK5RAP3-213ENST00000579605 VWDEQ8N2E2 1590 aa21.66■■□□□ 1.06
CDK5RAP3-213ENST00000579605 NPHP4O75161 1426 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-213ENST00000579605 KIAA1107Q9UPP5 1409 aa21.65■■□□□ 1.06
CDK5RAP3-213ENST00000579605 KIF3BO15066 747 aa21.65■■□□□ 1.06
CDK5RAP3-213ENST00000579605 POLR1AO95602 1720 aaPredicted RBP21.63■■□□□ 1.05
CDK5RAP3-213ENST00000579605 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
CDK5RAP3-213ENST00000579605 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
CDK5RAP3-213ENST00000579605 PLEKHH2Q8IVE3 1493 aa21.63■■□□□ 1.05
CDK5RAP3-213ENST00000579605 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
CDK5RAP3-213ENST00000579605 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
CDK5RAP3-213ENST00000579605 POTEAQ6S8J7 498 aa21.62■■□□□ 1.05
CDK5RAP3-213ENST00000579605 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
CDK5RAP3-213ENST00000579605 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
CDK5RAP3-213ENST00000579605 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
CDK5RAP3-213ENST00000579605 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
CDK5RAP3-213ENST00000579605 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
CDK5RAP3-213ENST00000579605 MED14O60244 1454 aa21.56■■□□□ 1.04
CDK5RAP3-213ENST00000579605 PZPP20742 1482 aa21.56■■□□□ 1.04
CDK5RAP3-213ENST00000579605 UGGT1Q9NYU2 1555 aa21.55■■□□□ 1.04
CDK5RAP3-213ENST00000579605 ADGBQ8N7X0 1667 aa21.53■■□□□ 1.04
CDK5RAP3-213ENST00000579605 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
CDK5RAP3-213ENST00000579605 FYCO1Q9BQS8 1478 aa21.5■■□□□ 1.03
CDK5RAP3-213ENST00000579605 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
CDK5RAP3-213ENST00000579605 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
CDK5RAP3-213ENST00000579605 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 RNF17Q9BXT8 1623 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 RTEL1-TNFRSF6BF6WH68 1400 aa21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 IQGAP1P46940 1657 aa21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 MBD5Q9P267 1494 aa21.48■■□□□ 1.03
CDK5RAP3-213ENST00000579605 TXNDC2Q86VQ3 553 aa21.42■■□□□ 1.02
CDK5RAP3-213ENST00000579605 SYNMO15061 1565 aa21.41■■□□□ 1.02
CDK5RAP3-213ENST00000579605 LTKP29376 864 aa21.4■■□□□ 1.02
CDK5RAP3-213ENST00000579605 FAM135BQ49AJ0 1406 aa21.39■■□□□ 1.02
CDK5RAP3-213ENST00000579605 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-213ENST00000579605 TIAM1Q13009 1591 aa21.36■■□□□ 1.01
CDK5RAP3-213ENST00000579605 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
CDK5RAP3-213ENST00000579605 SCAF11Q99590 1463 aaKnown RBP21.34■■□□□ 1.01
CDK5RAP3-213ENST00000579605 TSPY4P0CV99 314 aa21.34■■□□□ 1.01
CDK5RAP3-213ENST00000579605 TSPY10P0CW01 314 aa21.34■■□□□ 1.01
CDK5RAP3-213ENST00000579605 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
CDK5RAP3-213ENST00000579605 RSPH4AQ5TD94 716 aa21.33■■□□□ 1.01
CDK5RAP3-213ENST00000579605 TMEM94Q12767 1356 aa21.33■■□□□ 1
CDK5RAP3-213ENST00000579605 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
CDK5RAP3-213ENST00000579605 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
CDK5RAP3-213ENST00000579605 UPF1Q92900 1129 aaKnown RBP eCLIP21.32■■□□□ 1
CDK5RAP3-213ENST00000579605 ERVK-7P63135 1459 aa21.31■■□□□ 1
CDK5RAP3-213ENST00000579605 ZC3H13Q5T200 1668 aaKnown RBP21.31■■□□□ 1
CDK5RAP3-213ENST00000579605 TRIM52Q96A61 297 aa21.3■■□□□ 1
CDK5RAP3-213ENST00000579605 ABCC3O15438 1527 aa21.28■■□□□ 1
CDK5RAP3-213ENST00000579605 NCOA2Q15596 1464 aa21.27■■□□□ 1
CDK5RAP3-213ENST00000579605 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
CDK5RAP3-213ENST00000579605 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
CDK5RAP3-213ENST00000579605 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
CDK5RAP3-213ENST00000579605 KCNA6P17658 529 aa21.25■□□□□ 0.99
CDK5RAP3-213ENST00000579605 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
CDK5RAP3-213ENST00000579605 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
CDK5RAP3-213ENST00000579605 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-213ENST00000579605 ROBO1Q9Y6N7 1651 aa21.24■□□□□ 0.99
CDK5RAP3-213ENST00000579605 UBR1Q8IWV7 1749 aa21.23■□□□□ 0.99
CDK5RAP3-213ENST00000579605 EHBP1L1Q8N3D4 1523 aa21.23■□□□□ 0.99
CDK5RAP3-213ENST00000579605 JCADQ9P266 1359 aa21.23■□□□□ 0.99
CDK5RAP3-213ENST00000579605 ARHGAP23Q9P227 1491 aa21.22■□□□□ 0.99
CDK5RAP3-213ENST00000579605 SLAIN2Q9P270 581 aa21.22■□□□□ 0.99
CDK5RAP3-213ENST00000579605 SLIT1O75093 1534 aa21.2■□□□□ 0.98
CDK5RAP3-213ENST00000579605 BCANQ96GW7 911 aa21.2■□□□□ 0.98
CDK5RAP3-213ENST00000579605 ZNF772Q68DY9 489 aaPredicted RBP21.18■□□□□ 0.98
CDK5RAP3-213ENST00000579605 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
CDK5RAP3-213ENST00000579605 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
CDK5RAP3-213ENST00000579605 MSH6P52701 1360 aa21.16■□□□□ 0.98
CDK5RAP3-213ENST00000579605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.986e-9■■□□□ 13.2
CDK5RAP3-213ENST00000579605 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CDK5RAP3-213ENST00000579605 MAP3K1Q13233 1512 aa21.14■□□□□ 0.98
CDK5RAP3-213ENST00000579605 RXRBP28702 533 aa21.14■□□□□ 0.97
CDK5RAP3-213ENST00000579605 PHLPP1O60346 1717 aa21.12■□□□□ 0.97
CDK5RAP3-213ENST00000579605 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
CDK5RAP3-213ENST00000579605 IDI1Q13907 227 aa21.11■□□□□ 0.97
CDK5RAP3-213ENST00000579605 CEP152O94986 1710 aa21.11■□□□□ 0.97
CDK5RAP3-213ENST00000579605 LRP6O75581 1613 aa21.11■□□□□ 0.97
CDK5RAP3-213ENST00000579605 SPATA31A6Q5VVP1 1343 aa21.1■□□□□ 0.97
CDK5RAP3-213ENST00000579605 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
CDK5RAP3-213ENST00000579605 PRDM15P57071 1507 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-213ENST00000579605 NUTM2BA6NNL0 878 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-213ENST00000579605 NUTM2EB1AL46 878 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-213ENST00000579605 NUTM2AQ8IVF1 878 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-213ENST00000579605 C14orf37Q86TY3 774 aa21.07■□□□□ 0.96
CDK5RAP3-213ENST00000579605 PIK3C2BO00750 1634 aa21.07■□□□□ 0.96
CDK5RAP3-213ENST00000579605 ARHGAP31Q2M1Z3 1444 aa21.06■□□□□ 0.96
CDK5RAP3-213ENST00000579605 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
CDK5RAP3-213ENST00000579605 EIF2AK4Q9P2K8 1649 aaKnown RBP21.04■□□□□ 0.96
CDK5RAP3-213ENST00000579605 EFCAB6Q5THR3 1501 aa21.04■□□□□ 0.96
CDK5RAP3-213ENST00000579605 TET3O43151 1660 aa21.03■□□□□ 0.96
CDK5RAP3-213ENST00000579605 NKTRP30414 1462 aaKnown RBP21.02■□□□□ 0.96
CDK5RAP3-213ENST00000579605 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.95
CDK5RAP3-213ENST00000579605 COL16A1Q07092 1604 aaPredicted RBP21■□□□□ 0.95
CDK5RAP3-213ENST00000579605 FGD6Q6ZV73 1430 aa21■□□□□ 0.95
CDK5RAP3-213ENST00000579605 DUOX2Q9NRD8 1548 aa20.99■□□□□ 0.95
CDK5RAP3-213ENST00000579605 AFF2P51816 1311 aa20.99■□□□□ 0.95
CDK5RAP3-213ENST00000579605 KANK1Q14678 1352 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms