RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 SYCP2Q9BX26 1530 aa13.28□□□□□ -0.28
PPP4R1-212ENST00000579415 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.29
PPP4R1-212ENST00000579415 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
PPP4R1-212ENST00000579415 PZPP20742 1482 aa13.26□□□□□ -0.29
PPP4R1-212ENST00000579415 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
PPP4R1-212ENST00000579415 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
PPP4R1-212ENST00000579415 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
PPP4R1-212ENST00000579415 SYNMO15061 1565 aa13.24□□□□□ -0.29
PPP4R1-212ENST00000579415 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-212ENST00000579415 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
PPP4R1-212ENST00000579415 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-212ENST00000579415 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
PPP4R1-212ENST00000579415 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-212ENST00000579415 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-212ENST00000579415 KIF3BO15066 747 aa13.22□□□□□ -0.29
PPP4R1-212ENST00000579415 STRCP1A6NGW2 1772 aa13.21□□□□□ -0.29
PPP4R1-212ENST00000579415 IQGAP1P46940 1657 aa13.21□□□□□ -0.3
PPP4R1-212ENST00000579415 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
PPP4R1-212ENST00000579415 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
PPP4R1-212ENST00000579415 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-212ENST00000579415 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
PPP4R1-212ENST00000579415 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
PPP4R1-212ENST00000579415 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
PPP4R1-212ENST00000579415 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
PPP4R1-212ENST00000579415 ZNF772Q68DY9 489 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-212ENST00000579415 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
PPP4R1-212ENST00000579415 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
PPP4R1-212ENST00000579415 LTKP29376 864 aa13.15□□□□□ -0.3
PPP4R1-212ENST00000579415 CCNB3Q8WWL7 1395 aa13.15□□□□□ -0.3
PPP4R1-212ENST00000579415 JCADQ9P266 1359 aa13.15□□□□□ -0.3
PPP4R1-212ENST00000579415 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
PPP4R1-212ENST00000579415 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-212ENST00000579415 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
PPP4R1-212ENST00000579415 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
PPP4R1-212ENST00000579415 SCAF11Q99590 1463 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-212ENST00000579415 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
PPP4R1-212ENST00000579415 RXRBP28702 533 aa13.11□□□□□ -0.31
PPP4R1-212ENST00000579415 ZC3H13Q5T200 1668 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-212ENST00000579415 KCNA6P17658 529 aa13.1□□□□□ -0.31
PPP4R1-212ENST00000579415 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
PPP4R1-212ENST00000579415 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
PPP4R1-212ENST00000579415 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
PPP4R1-212ENST00000579415 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-212ENST00000579415 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-212ENST00000579415 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
PPP4R1-212ENST00000579415 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.31
PPP4R1-212ENST00000579415 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-212ENST00000579415 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
PPP4R1-212ENST00000579415 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
PPP4R1-212ENST00000579415 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
PPP4R1-212ENST00000579415 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-212ENST00000579415 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
PPP4R1-212ENST00000579415 SLIT1O75093 1534 aa13.06□□□□□ -0.32
PPP4R1-212ENST00000579415 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-212ENST00000579415 LRP6O75581 1613 aa13.06□□□□□ -0.32
PPP4R1-212ENST00000579415 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
PPP4R1-212ENST00000579415 MAP3K1Q13233 1512 aa13.05□□□□□ -0.32
PPP4R1-212ENST00000579415 MSH6P52701 1360 aa13.04□□□□□ -0.32
PPP4R1-212ENST00000579415 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
PPP4R1-212ENST00000579415 ABCC3O15438 1527 aa13.03□□□□□ -0.32
PPP4R1-212ENST00000579415 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
PPP4R1-212ENST00000579415 TMEM2Q9UHN6 1383 aa13.02□□□□□ -0.33
PPP4R1-212ENST00000579415 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-212ENST00000579415 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
PPP4R1-212ENST00000579415 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
PPP4R1-212ENST00000579415 FOXD1Q16676 465 aa13□□□□□ -0.33
PPP4R1-212ENST00000579415 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
PPP4R1-212ENST00000579415 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
PPP4R1-212ENST00000579415 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
PPP4R1-212ENST00000579415 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
PPP4R1-212ENST00000579415 PHLPP1O60346 1717 aa12.99□□□□□ -0.33
PPP4R1-212ENST00000579415 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-212ENST00000579415 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-212ENST00000579415 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
PPP4R1-212ENST00000579415 AFF2P51816 1311 aa12.96□□□□□ -0.33
PPP4R1-212ENST00000579415 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
PPP4R1-212ENST00000579415 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 RGS12O14924 1447 aa12.95□□□□□ -0.34
PPP4R1-212ENST00000579415 TET3O43151 1660 aa12.94□□□□□ -0.34
PPP4R1-212ENST00000579415 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
PPP4R1-212ENST00000579415 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
PPP4R1-212ENST00000579415 IDI1Q13907 227 aa12.92□□□□□ -0.34
PPP4R1-212ENST00000579415 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
PPP4R1-212ENST00000579415 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
PPP4R1-212ENST00000579415 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
PPP4R1-212ENST00000579415 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
PPP4R1-212ENST00000579415 BCANQ96GW7 911 aa12.9□□□□□ -0.34
PPP4R1-212ENST00000579415 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
PPP4R1-212ENST00000579415 AHDC1Q5TGY3 1603 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms