RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 NEURL4Q96JN8 1562 aa14.27□□□□□ -0.12
BRIP1-204ENST00000579028 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
BRIP1-204ENST00000579028 CCNB3Q8WWL7 1395 aa14.26□□□□□ -0.13
BRIP1-204ENST00000579028 TOM1O60784 492 aa14.26□□□□□ -0.13
BRIP1-204ENST00000579028 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
BRIP1-204ENST00000579028 PIP4K2BP78356 416 aa14.24□□□□□ -0.13
BRIP1-204ENST00000579028 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
BRIP1-204ENST00000579028 TNRQ92752 1358 aa14.23□□□□□ -0.13
BRIP1-204ENST00000579028 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
BRIP1-204ENST00000579028 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
BRIP1-204ENST00000579028 MBD5Q9P267 1494 aa14.23□□□□□ -0.13
BRIP1-204ENST00000579028 PZPP20742 1482 aa14.22□□□□□ -0.13
BRIP1-204ENST00000579028 VWDEQ8N2E2 1590 aa14.22□□□□□ -0.13
BRIP1-204ENST00000579028 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
BRIP1-204ENST00000579028 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
BRIP1-204ENST00000579028 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
BRIP1-204ENST00000579028 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
BRIP1-204ENST00000579028 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
BRIP1-204ENST00000579028 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
BRIP1-204ENST00000579028 DEPDC5O75140 1603 aa14.19□□□□□ -0.14
BRIP1-204ENST00000579028 MED14O60244 1454 aa14.19□□□□□ -0.14
BRIP1-204ENST00000579028 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
BRIP1-204ENST00000579028 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
BRIP1-204ENST00000579028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.18□□□□□ -0.14
BRIP1-204ENST00000579028 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
BRIP1-204ENST00000579028 NPHP4O75161 1426 aaPredicted RBP14.16□□□□□ -0.14
BRIP1-204ENST00000579028 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
BRIP1-204ENST00000579028 EHBP1L1Q8N3D4 1523 aa14.16□□□□□ -0.14
BRIP1-204ENST00000579028 KIF3BO15066 747 aa14.16□□□□□ -0.14
BRIP1-204ENST00000579028 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
BRIP1-204ENST00000579028 UGGT1Q9NYU2 1555 aa14.16□□□□□ -0.14
BRIP1-204ENST00000579028 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
BRIP1-204ENST00000579028 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
BRIP1-204ENST00000579028 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
BRIP1-204ENST00000579028 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
BRIP1-204ENST00000579028 STRCP1A6NGW2 1772 aa14.13□□□□□ -0.15
BRIP1-204ENST00000579028 LRRC7Q96NW7 1537 aa14.12□□□□□ -0.15
BRIP1-204ENST00000579028 SYNMO15061 1565 aa14.12□□□□□ -0.15
BRIP1-204ENST00000579028 RNF17Q9BXT8 1623 aaKnown RBP14.12□□□□□ -0.15
BRIP1-204ENST00000579028 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
BRIP1-204ENST00000579028 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
BRIP1-204ENST00000579028 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
BRIP1-204ENST00000579028 ARHGEF5Q12774 1597 aa14.08□□□□□ -0.16
BRIP1-204ENST00000579028 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
BRIP1-204ENST00000579028 ABCC3O15438 1527 aa14.06□□□□□ -0.16
BRIP1-204ENST00000579028 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
BRIP1-204ENST00000579028 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
BRIP1-204ENST00000579028 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
BRIP1-204ENST00000579028 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
BRIP1-204ENST00000579028 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
BRIP1-204ENST00000579028 UBR1Q8IWV7 1749 aa14.03□□□□□ -0.16
BRIP1-204ENST00000579028 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
BRIP1-204ENST00000579028 TSPY4P0CV99 314 aa14.02□□□□□ -0.17
BRIP1-204ENST00000579028 TSPY10P0CW01 314 aa14.02□□□□□ -0.17
BRIP1-204ENST00000579028 XIRP1Q702N8 1843 aaKnown RBP14.01□□□□□ -0.17
BRIP1-204ENST00000579028 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
BRIP1-204ENST00000579028 SLIT1O75093 1534 aa14□□□□□ -0.17
BRIP1-204ENST00000579028 ARHGAP23Q9P227 1491 aa14□□□□□ -0.17
BRIP1-204ENST00000579028 CEP152O94986 1710 aa13.98□□□□□ -0.17
BRIP1-204ENST00000579028 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
BRIP1-204ENST00000579028 LTKP29376 864 aa13.97□□□□□ -0.17
BRIP1-204ENST00000579028 TXNDC2Q86VQ3 553 aa13.96□□□□□ -0.17
BRIP1-204ENST00000579028 CFAP65Q6ZU64 1925 aaKnown RBP13.96□□□□□ -0.18
BRIP1-204ENST00000579028 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
BRIP1-204ENST00000579028 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
BRIP1-204ENST00000579028 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
BRIP1-204ENST00000579028 DUOX2Q9NRD8 1548 aa13.93□□□□□ -0.18
BRIP1-204ENST00000579028 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
BRIP1-204ENST00000579028 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
BRIP1-204ENST00000579028 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
BRIP1-204ENST00000579028 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
BRIP1-204ENST00000579028 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
BRIP1-204ENST00000579028 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
BRIP1-204ENST00000579028 MAP3K1Q13233 1512 aa13.9□□□□□ -0.18
BRIP1-204ENST00000579028 KDM5AP29375 1690 aaKnown RBP13.9□□□□□ -0.18
BRIP1-204ENST00000579028 KCNA6P17658 529 aa13.88□□□□□ -0.19
BRIP1-204ENST00000579028 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
BRIP1-204ENST00000579028 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
BRIP1-204ENST00000579028 TET3O43151 1660 aa13.88□□□□□ -0.19
BRIP1-204ENST00000579028 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
BRIP1-204ENST00000579028 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
BRIP1-204ENST00000579028 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
BRIP1-204ENST00000579028 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
BRIP1-204ENST00000579028 SETD1AO15047 1707 aaKnown RBP13.85□□□□□ -0.19
BRIP1-204ENST00000579028 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
BRIP1-204ENST00000579028 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
BRIP1-204ENST00000579028 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
BRIP1-204ENST00000579028 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
BRIP1-204ENST00000579028 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
BRIP1-204ENST00000579028 IDI1Q13907 227 aa13.83□□□□□ -0.2
BRIP1-204ENST00000579028 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
BRIP1-204ENST00000579028 JCADQ9P266 1359 aa13.83□□□□□ -0.2
BRIP1-204ENST00000579028 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
BRIP1-204ENST00000579028 MSH6P52701 1360 aa13.82□□□□□ -0.2
BRIP1-204ENST00000579028 KANK1Q14678 1352 aa13.82□□□□□ -0.2
BRIP1-204ENST00000579028 ABCC5O15440 1437 aa13.81□□□□□ -0.2
BRIP1-204ENST00000579028 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
BRIP1-204ENST00000579028 KANK4Q5T7N3 995 aaPredicted RBP13.81□□□□□ -0.2
BRIP1-204ENST00000579028 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
BRIP1-204ENST00000579028 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms