RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 ERBINQ96RT1 1412 aa19.34■□□□□ 0.69
CSNK1D-207ENST00000578194 CLTCQ00610 1675 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-207ENST00000578194 RNF17Q9BXT8 1623 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-207ENST00000578194 C3P01024 1663 aa19.33■□□□□ 0.68
CSNK1D-207ENST00000578194 ITGAEP38570 1179 aa19.31■□□□□ 0.68
CSNK1D-207ENST00000578194 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
CSNK1D-207ENST00000578194 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
CSNK1D-207ENST00000578194 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
CSNK1D-207ENST00000578194 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
CSNK1D-207ENST00000578194 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-207ENST00000578194 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
CSNK1D-207ENST00000578194 SETD1BQ9UPS6 1966 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-207ENST00000578194 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
CSNK1D-207ENST00000578194 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
CSNK1D-207ENST00000578194 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-207ENST00000578194 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
CSNK1D-207ENST00000578194 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
CSNK1D-207ENST00000578194 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-207ENST00000578194 PREX1Q8TCU6 1659 aa19.24■□□□□ 0.67
CSNK1D-207ENST00000578194 CEP152O94986 1710 aa19.23■□□□□ 0.67
CSNK1D-207ENST00000578194 KANK1Q14678 1352 aa19.22■□□□□ 0.67
CSNK1D-207ENST00000578194 ABCC3O15438 1527 aa19.22■□□□□ 0.67
CSNK1D-207ENST00000578194 NPATQ14207 1427 aa19.21■□□□□ 0.67
CSNK1D-207ENST00000578194 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
CSNK1D-207ENST00000578194 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
CSNK1D-207ENST00000578194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.662e-7■□□□□ 9.2
CSNK1D-207ENST00000578194 PZPP20742 1482 aa19.17■□□□□ 0.66
CSNK1D-207ENST00000578194 UNC13BO14795 1591 aa19.17■□□□□ 0.66
CSNK1D-207ENST00000578194 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
CSNK1D-207ENST00000578194 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
CSNK1D-207ENST00000578194 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
CSNK1D-207ENST00000578194 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.65
CSNK1D-207ENST00000578194 MYO3AQ8NEV4 1616 aa19.12■□□□□ 0.65
CSNK1D-207ENST00000578194 CFAP65Q6ZU64 1925 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-207ENST00000578194 HFM1A2PYH4 1435 aa19.11■□□□□ 0.65
CSNK1D-207ENST00000578194 NAIPQ13075 1403 aa19.11■□□□□ 0.65
CSNK1D-207ENST00000578194 ARHGAP31Q2M1Z3 1444 aa19.1■□□□□ 0.65
CSNK1D-207ENST00000578194 TET3O43151 1660 aa19.1■□□□□ 0.65
CSNK1D-207ENST00000578194 ZNF142P52746 1687 aaPredicted RBP19.1■□□□□ 0.65
CSNK1D-207ENST00000578194 TNRQ92752 1358 aa19.09■□□□□ 0.65
CSNK1D-207ENST00000578194 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
CSNK1D-207ENST00000578194 EFCAB6Q5THR3 1501 aa19.09■□□□□ 0.65
CSNK1D-207ENST00000578194 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.65
CSNK1D-207ENST00000578194 FBXO31Q5XUX0 539 aaPredicted RBP19.07■□□□□ 0.64
CSNK1D-207ENST00000578194 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
CSNK1D-207ENST00000578194 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
CSNK1D-207ENST00000578194 NUP155O75694 1391 aa19.06■□□□□ 0.64
CSNK1D-207ENST00000578194 HSPA2P54652 639 aa19.04■□□□□ 0.64
CSNK1D-207ENST00000578194 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
CSNK1D-207ENST00000578194 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
CSNK1D-207ENST00000578194 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
CSNK1D-207ENST00000578194 E9PCH4 1651 aa19■□□□□ 0.63
CSNK1D-207ENST00000578194 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
CSNK1D-207ENST00000578194 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-207ENST00000578194 NOS1P29475 1434 aa18.96■□□□□ 0.63
CSNK1D-207ENST00000578194 SETD5Q9C0A6 1442 aa18.96■□□□□ 0.63
CSNK1D-207ENST00000578194 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
CSNK1D-207ENST00000578194 SYNMO15061 1565 aa18.95■□□□□ 0.62
CSNK1D-207ENST00000578194 STRCQ7RTU9 1775 aa18.95■□□□□ 0.62
CSNK1D-207ENST00000578194 PLA2R1Q13018 1463 aa18.95■□□□□ 0.62
CSNK1D-207ENST00000578194 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
CSNK1D-207ENST00000578194 PIK3C2BO00750 1634 aa18.93■□□□□ 0.62
CSNK1D-207ENST00000578194 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-207ENST00000578194 KDM5AP29375 1690 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-207ENST00000578194 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-207ENST00000578194 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
CSNK1D-207ENST00000578194 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
CSNK1D-207ENST00000578194 SLC52A1Q9NWF4 448 aa18.9■□□□□ 0.62
CSNK1D-207ENST00000578194 PKD2Q13563 968 aa18.88■□□□□ 0.61
CSNK1D-207ENST00000578194 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-207ENST00000578194 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
CSNK1D-207ENST00000578194 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
CSNK1D-207ENST00000578194 IDI1Q13907 227 aa18.87■□□□□ 0.61
CSNK1D-207ENST00000578194 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
CSNK1D-207ENST00000578194 PTPRTO14522 1441 aa18.86■□□□□ 0.61
CSNK1D-207ENST00000578194 NCKAP5LQ9HCH0 1330 aa18.84■□□□□ 0.61
CSNK1D-207ENST00000578194 ANKLE2Q86XL3 938 aa18.84■□□□□ 0.61
CSNK1D-207ENST00000578194 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
CSNK1D-207ENST00000578194 TRPM2O94759 1503 aa18.83■□□□□ 0.6
CSNK1D-207ENST00000578194 HRCP23327 699 aa18.82■□□□□ 0.6
CSNK1D-207ENST00000578194 SLIT1O75093 1534 aa18.82■□□□□ 0.6
CSNK1D-207ENST00000578194 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
CSNK1D-207ENST00000578194 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
CSNK1D-207ENST00000578194 ARHGAP23Q9P227 1491 aa18.81■□□□□ 0.6
CSNK1D-207ENST00000578194 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
CSNK1D-207ENST00000578194 KIF1BO60333 1816 aa18.79■□□□□ 0.6
CSNK1D-207ENST00000578194 TMEM2Q9UHN6 1383 aa18.79■□□□□ 0.6
CSNK1D-207ENST00000578194 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
CSNK1D-207ENST00000578194 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-207ENST00000578194 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-207ENST00000578194 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
CSNK1D-207ENST00000578194 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
CSNK1D-207ENST00000578194 MED14O60244 1454 aa18.77■□□□□ 0.6
CSNK1D-207ENST00000578194 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-207ENST00000578194 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-207ENST00000578194 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
CSNK1D-207ENST00000578194 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-207ENST00000578194 FOXD1Q16676 465 aa18.72■□□□□ 0.59
CSNK1D-207ENST00000578194 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
CSNK1D-207ENST00000578194 LTKP29376 864 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms