RNA–Protein interactions for RNA: ENST00000573412.1

CCP110-211, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-211ENST00000573412 SHANK2Q9UPX8 1470 aa23.82■■□□□ 1.4
CCP110-211ENST00000573412 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
CCP110-211ENST00000573412 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
CCP110-211ENST00000573412 PPP4R3CPQ6ZMV5 832 aa23.8■■□□□ 1.4
CCP110-211ENST00000573412 ALKQ9UM73 1620 aa23.79■■□□□ 1.4
CCP110-211ENST00000573412 FYCO1Q9BQS8 1478 aa23.79■■□□□ 1.4
CCP110-211ENST00000573412 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
CCP110-211ENST00000573412 VWDEQ8N2E2 1590 aa23.76■■□□□ 1.39
CCP110-211ENST00000573412 TNRQ92752 1358 aa23.73■■□□□ 1.39
CCP110-211ENST00000573412 FBXO31Q5XUX0 539 aaPredicted RBP23.72■■□□□ 1.39
CCP110-211ENST00000573412 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
CCP110-211ENST00000573412 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
CCP110-211ENST00000573412 PZPP20742 1482 aa23.68■■□□□ 1.38
CCP110-211ENST00000573412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCP110-211ENST00000573412 MED14O60244 1454 aa23.68■■□□□ 1.38
CCP110-211ENST00000573412 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
CCP110-211ENST00000573412 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
CCP110-211ENST00000573412 DEPDC5O75140 1603 aa23.67■■□□□ 1.38
CCP110-211ENST00000573412 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
CCP110-211ENST00000573412 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
CCP110-211ENST00000573412 NPHP4O75161 1426 aaPredicted RBP23.65■■□□□ 1.38
CCP110-211ENST00000573412 STRCP1A6NGW2 1772 aa23.65■■□□□ 1.38
CCP110-211ENST00000573412 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.38
CCP110-211ENST00000573412 THEMISQ8N1K5 641 aaPredicted RBP23.64■■□□□ 1.37
CCP110-211ENST00000573412 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.37
CCP110-211ENST00000573412 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
CCP110-211ENST00000573412 NLRP1Q9C000 1473 aa23.62■■□□□ 1.37
CCP110-211ENST00000573412 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
CCP110-211ENST00000573412 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
CCP110-211ENST00000573412 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
CCP110-211ENST00000573412 KIF3BO15066 747 aa23.61■■□□□ 1.37
CCP110-211ENST00000573412 LRRC7Q96NW7 1537 aa23.6■■□□□ 1.37
CCP110-211ENST00000573412 MAPK8IP2Q13387 824 aaPredicted RBP23.6■■□□□ 1.37
CCP110-211ENST00000573412 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
CCP110-211ENST00000573412 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
CCP110-211ENST00000573412 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.37
CCP110-211ENST00000573412 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
CCP110-211ENST00000573412 SYNMO15061 1565 aa23.56■■□□□ 1.36
CCP110-211ENST00000573412 CCDC141Q6ZP82 1450 aa23.5■■□□□ 1.35
CCP110-211ENST00000573412 ZC3H13Q5T200 1668 aaKnown RBP23.5■■□□□ 1.35
CCP110-211ENST00000573412 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
CCP110-211ENST00000573412 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
CCP110-211ENST00000573412 XIRP1Q702N8 1843 aaKnown RBP23.46■■□□□ 1.35
CCP110-211ENST00000573412 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
CCP110-211ENST00000573412 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
CCP110-211ENST00000573412 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
CCP110-211ENST00000573412 ABCC3O15438 1527 aa23.42■■□□□ 1.34
CCP110-211ENST00000573412 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
CCP110-211ENST00000573412 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
CCP110-211ENST00000573412 CFAP65Q6ZU64 1925 aaKnown RBP23.4■■□□□ 1.34
CCP110-211ENST00000573412 POTEAQ6S8J7 498 aa23.39■■□□□ 1.33
CCP110-211ENST00000573412 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
CCP110-211ENST00000573412 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
CCP110-211ENST00000573412 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
CCP110-211ENST00000573412 FAM135BQ49AJ0 1406 aa23.35■■□□□ 1.33
CCP110-211ENST00000573412 LTKP29376 864 aa23.35■■□□□ 1.33
CCP110-211ENST00000573412 ARHGAP23Q9P227 1491 aa23.35■■□□□ 1.33
CCP110-211ENST00000573412 SLIT1O75093 1534 aa23.33■■□□□ 1.33
CCP110-211ENST00000573412 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
CCP110-211ENST00000573412 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
CCP110-211ENST00000573412 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
CCP110-211ENST00000573412 CEP152O94986 1710 aa23.32■■□□□ 1.32
CCP110-211ENST00000573412 EIF2AK4Q9P2K8 1649 aaKnown RBP23.31■■□□□ 1.32
CCP110-211ENST00000573412 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
CCP110-211ENST00000573412 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
CCP110-211ENST00000573412 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
CCP110-211ENST00000573412 ROBO1Q9Y6N7 1651 aa23.26■■□□□ 1.31
CCP110-211ENST00000573412 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
CCP110-211ENST00000573412 CNKSR2Q8WXI2 1034 aa23.22■■□□□ 1.31
CCP110-211ENST00000573412 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
CCP110-211ENST00000573412 MAP3K1Q13233 1512 aa23.21■■□□□ 1.31
CCP110-211ENST00000573412 PIK3C2BO00750 1634 aa23.2■■□□□ 1.3
CCP110-211ENST00000573412 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
CCP110-211ENST00000573412 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
CCP110-211ENST00000573412 KCNA6P17658 529 aa23.17■■□□□ 1.3
CCP110-211ENST00000573412 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
CCP110-211ENST00000573412 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
CCP110-211ENST00000573412 DUOX2Q9NRD8 1548 aa23.16■■□□□ 1.3
CCP110-211ENST00000573412 PRDM15P57071 1507 aaPredicted RBP23.15■■□□□ 1.3
CCP110-211ENST00000573412 TET3O43151 1660 aa23.15■■□□□ 1.3
CCP110-211ENST00000573412 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
CCP110-211ENST00000573412 PROSER2Q86WR7 435 aaPredicted RBP23.14■■□□□ 1.29
CCP110-211ENST00000573412 RBM33Q96EV2 1170 aaKnown RBP23.14■■□□□ 1.29
CCP110-211ENST00000573412 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
CCP110-211ENST00000573412 EFCAB6Q5THR3 1501 aa23.11■■□□□ 1.29
CCP110-211ENST00000573412 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
CCP110-211ENST00000573412 SLC26A8Q96RN1 970 aa23.1■■□□□ 1.29
CCP110-211ENST00000573412 JCADQ9P266 1359 aa23.1■■□□□ 1.29
CCP110-211ENST00000573412 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
CCP110-211ENST00000573412 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
CCP110-211ENST00000573412 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CCP110-211ENST00000573412 MSH6P52701 1360 aa23.06■■□□□ 1.28
CCP110-211ENST00000573412 IDI1Q13907 227 aa23.06■■□□□ 1.28
CCP110-211ENST00000573412 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCP110-211ENST00000573412 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
CCP110-211ENST00000573412 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
CCP110-211ENST00000573412 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
CCP110-211ENST00000573412 MYOM3Q5VTT5 1437 aa23.04■■□□□ 1.28
CCP110-211ENST00000573412 LRP6O75581 1613 aa23.03■■□□□ 1.28
CCP110-211ENST00000573412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms