RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 POM121Q96HA1 1249 aa7.28□□□□□ -1.24
TOPBP1-210ENST00000572787 SPATA32Q96LK8 384 aa7.28□□□□□ -1.24
TOPBP1-210ENST00000572787 UNCXA6NJT0 531 aa7.27□□□□□ -1.25
TOPBP1-210ENST00000572787 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
TOPBP1-210ENST00000572787 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
TOPBP1-210ENST00000572787 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
TOPBP1-210ENST00000572787 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-210ENST00000572787 RBM47A0AV96 593 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-210ENST00000572787 AMHR2Q16671 573 aa7.26□□□□□ -1.25
TOPBP1-210ENST00000572787 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-210ENST00000572787 SEC24BO95487 1268 aa7.25□□□□□ -1.25
TOPBP1-210ENST00000572787 PARP9Q8IXQ6 854 aa7.25□□□□□ -1.25
TOPBP1-210ENST00000572787 ZNF592Q92610 1267 aa7.25□□□□□ -1.25
TOPBP1-210ENST00000572787 DRC1Q96MC2 740 aa7.25□□□□□ -1.25
TOPBP1-210ENST00000572787 ZNF330Q9Y3S2 320 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-210ENST00000572787 POTEFA5A3E0 1075 aa7.23□□□□□ -1.25
TOPBP1-210ENST00000572787 SMARCA5O60264 1052 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-210ENST00000572787 BMP2KQ9NSY1 1161 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-210ENST00000572787 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
TOPBP1-210ENST00000572787 NEFLP07196 543 aa7.22□□□□□ -1.25
TOPBP1-210ENST00000572787 KIF12Q96FN5 646 aa7.22□□□□□ -1.25
TOPBP1-210ENST00000572787 CCDC61Q9Y6R9 512 aa7.22□□□□□ -1.25
TOPBP1-210ENST00000572787 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
TOPBP1-210ENST00000572787 MLLT3P42568 568 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-210ENST00000572787 CSB-PGBD3P0DP91 1061 aa7.2□□□□□ -1.26
TOPBP1-210ENST00000572787 TIE1P35590 1138 aa7.2□□□□□ -1.26
TOPBP1-210ENST00000572787 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-210ENST00000572787 COG6Q9Y2V7 657 aa7.2□□□□□ -1.26
TOPBP1-210ENST00000572787 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
TOPBP1-210ENST00000572787 MAP2K5Q13163 448 aa7.19□□□□□ -1.26
TOPBP1-210ENST00000572787 TSR1Q2NL82 804 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-210ENST00000572787 SH3D19Q5HYK7 790 aa7.19□□□□□ -1.26
TOPBP1-210ENST00000572787 CCDC102AQ96A19 550 aa7.19□□□□□ -1.26
TOPBP1-210ENST00000572787 IRF6O14896 467 aa7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 WWC1Q8IX03 1113 aa7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 PBXIP1Q96AQ6 731 aa7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 C8orf37Q96NL8 207 aa7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 BRPF3Q9ULD4 1205 aa7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 COLQQ9Y215 455 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-210ENST00000572787 ST18O60284 1047 aa7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 PDE4AP27815 886 aa7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 MFSD10Q14728 455 aa7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 SLAIN1Q8ND83 568 aa7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 LARP6Q9BRS8 491 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
TOPBP1-210ENST00000572787 GPR37O15354 613 aa7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 MAP3K13O43283 966 aa7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 KDM4AO75164 1064 aa7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 MMRN1Q13201 1228 aa7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 MFRPQ9BY79 579 aa7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-210ENST00000572787 ANKRD62A6NC57 917 aa7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 TBC1D12O60347 775 aa7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 ERCC3P19447 782 aa7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 CAMK2BQ13554 666 aa7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 TTLL12Q14166 644 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 NOL8Q76FK4 1167 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-210ENST00000572787 TTLL13PA6NNM8 815 aa7.14□□□□□ -1.27
TOPBP1-210ENST00000572787 ZC3H4Q9UPT8 1303 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-210ENST00000572787 NCKAP5LQ9HCH0 1330 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 PLEKHD1A6NEE1 506 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 TCF3P15923 654 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 IER5LQ5T953 404 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 SPNS2Q8IVW8 549 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 UBXN4Q92575 508 aa7.13□□□□□ -1.27
TOPBP1-210ENST00000572787 PPP1R37O75864 691 aa7.12□□□□□ -1.27
TOPBP1-210ENST00000572787 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
TOPBP1-210ENST00000572787 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-210ENST00000572787 DDX27Q96GQ7 796 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-210ENST00000572787 VRTNQ9H8Y1 702 aa7.11□□□□□ -1.27
TOPBP1-210ENST00000572787 TRIM35Q9UPQ4 493 aa7.11□□□□□ -1.27
TOPBP1-210ENST00000572787 PYGBP11216 843 aa7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 MS4A1P11836 297 aa7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 SF3A1Q15459 793 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 TXNDC2Q86VQ3 553 aa7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 ZNF526Q8TF50 670 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 SIRT1Q96EB6 747 aa7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-210ENST00000572787 ZNF326Q5BKZ1 582 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-210ENST00000572787 TMED8Q6PL24 325 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-210ENST00000572787 OXER1Q8TDS5 423 aa7.09□□□□□ -1.27
TOPBP1-210ENST00000572787 GLMNQ92990 594 aa7.09□□□□□ -1.27
TOPBP1-210ENST00000572787 PRDM16Q9HAZ2 1276 aa7.09□□□□□ -1.27
TOPBP1-210ENST00000572787 LOC102724159A0A0B4J2E5 919 aa7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 MARCH6O60337 910 aa7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 ZC3H6P61129 1189 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 PWP2Q15269 919 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 TMEM121BQ9BXQ6 578 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 ATP1B4Q9UN42 357 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 RIPOR2Q9Y4F9 1068 aa7.08□□□□□ -1.28
TOPBP1-210ENST00000572787 SPDYE16A6NNV3 312 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-210ENST00000572787 NLRP6P59044 892 aa7.07□□□□□ -1.28
TOPBP1-210ENST00000572787 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 SNPHO15079 494 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms