RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 KIF3BO15066 747 aa14.11□□□□□ -0.15
SMG1-216ENST00000569122 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
SMG1-216ENST00000569122 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
SMG1-216ENST00000569122 SUPT6HQ7KZ85 1726 aaKnown RBP14.11□□□□□ -0.15
SMG1-216ENST00000569122 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
SMG1-216ENST00000569122 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
SMG1-216ENST00000569122 MIA2Q96PC5 1412 aa14.1□□□□□ -0.15
SMG1-216ENST00000569122 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
SMG1-216ENST00000569122 MED14O60244 1454 aa14.09□□□□□ -0.15
SMG1-216ENST00000569122 FYCO1Q9BQS8 1478 aa14.09□□□□□ -0.15
SMG1-216ENST00000569122 PZPP20742 1482 aa14.08□□□□□ -0.16
SMG1-216ENST00000569122 INO80Q9ULG1 1556 aaPredicted RBP14.07□□□□□ -0.16
SMG1-216ENST00000569122 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
SMG1-216ENST00000569122 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
SMG1-216ENST00000569122 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
SMG1-216ENST00000569122 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
SMG1-216ENST00000569122 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
SMG1-216ENST00000569122 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
SMG1-216ENST00000569122 UGGT1Q9NYU2 1555 aa14.04□□□□□ -0.16
SMG1-216ENST00000569122 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
SMG1-216ENST00000569122 ADGBQ8N7X0 1667 aa14.02□□□□□ -0.16
SMG1-216ENST00000569122 DEPDC5O75140 1603 aa14.02□□□□□ -0.16
SMG1-216ENST00000569122 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.16
SMG1-216ENST00000569122 MBD5Q9P267 1494 aa14.02□□□□□ -0.16
SMG1-216ENST00000569122 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
SMG1-216ENST00000569122 TSPY4P0CV99 314 aa14.02□□□□□ -0.17
SMG1-216ENST00000569122 TSPY10P0CW01 314 aa14.02□□□□□ -0.17
SMG1-216ENST00000569122 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
SMG1-216ENST00000569122 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
SMG1-216ENST00000569122 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
SMG1-216ENST00000569122 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
SMG1-216ENST00000569122 ALKQ9UM73 1620 aa13.98□□□□□ -0.17
SMG1-216ENST00000569122 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
SMG1-216ENST00000569122 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
SMG1-216ENST00000569122 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
SMG1-216ENST00000569122 POTEAQ6S8J7 498 aa13.96□□□□□ -0.17
SMG1-216ENST00000569122 SYNMO15061 1565 aa13.96□□□□□ -0.18
SMG1-216ENST00000569122 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
SMG1-216ENST00000569122 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
SMG1-216ENST00000569122 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
SMG1-216ENST00000569122 LTKP29376 864 aa13.9□□□□□ -0.18
SMG1-216ENST00000569122 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
SMG1-216ENST00000569122 KCNA6P17658 529 aa13.89□□□□□ -0.19
SMG1-216ENST00000569122 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
SMG1-216ENST00000569122 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
SMG1-216ENST00000569122 PROSER2Q86WR7 435 aaPredicted RBP13.88□□□□□ -0.19
SMG1-216ENST00000569122 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
SMG1-216ENST00000569122 TMEM94Q12767 1356 aa13.87□□□□□ -0.19
SMG1-216ENST00000569122 ZNF772Q68DY9 489 aaPredicted RBP13.86□□□□□ -0.19
SMG1-216ENST00000569122 LRRC9Q6ZRR7 1453 aa13.86□□□□□ -0.19
SMG1-216ENST00000569122 ABCC3O15438 1527 aa13.85□□□□□ -0.19
SMG1-216ENST00000569122 JCADQ9P266 1359 aa13.85□□□□□ -0.19
SMG1-216ENST00000569122 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
SMG1-216ENST00000569122 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
SMG1-216ENST00000569122 SLIT1O75093 1534 aa13.85□□□□□ -0.19
SMG1-216ENST00000569122 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
SMG1-216ENST00000569122 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
SMG1-216ENST00000569122 MSH6P52701 1360 aa13.83□□□□□ -0.19
SMG1-216ENST00000569122 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
SMG1-216ENST00000569122 NCOA2Q15596 1464 aa13.82□□□□□ -0.2
SMG1-216ENST00000569122 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
SMG1-216ENST00000569122 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMG1-216ENST00000569122 SPATA31A6Q5VVP1 1343 aa13.82□□□□□ -0.2
SMG1-216ENST00000569122 STRCP1A6NGW2 1772 aa13.81□□□□□ -0.2
SMG1-216ENST00000569122 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
SMG1-216ENST00000569122 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
SMG1-216ENST00000569122 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
SMG1-216ENST00000569122 BCANQ96GW7 911 aa13.79□□□□□ -0.2
SMG1-216ENST00000569122 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
SMG1-216ENST00000569122 RXRBP28702 533 aa13.78□□□□□ -0.2
SMG1-216ENST00000569122 KANK1Q14678 1352 aa13.78□□□□□ -0.2
SMG1-216ENST00000569122 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
SMG1-216ENST00000569122 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 IDI1Q13907 227 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 FOXD1Q16676 465 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
SMG1-216ENST00000569122 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
SMG1-216ENST00000569122 NKTRP30414 1462 aaKnown RBP13.75□□□□□ -0.21
SMG1-216ENST00000569122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.212e-12■□□□□ 10.8
SMG1-216ENST00000569122 DUOX2Q9NRD8 1548 aa13.74□□□□□ -0.21
SMG1-216ENST00000569122 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
SMG1-216ENST00000569122 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
SMG1-216ENST00000569122 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
SMG1-216ENST00000569122 ROBO1Q9Y6N7 1651 aa13.74□□□□□ -0.21
SMG1-216ENST00000569122 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
SMG1-216ENST00000569122 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
SMG1-216ENST00000569122 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
SMG1-216ENST00000569122 EFCAB6Q5THR3 1501 aa13.72□□□□□ -0.21
SMG1-216ENST00000569122 ERBINQ96RT1 1412 aa13.72□□□□□ -0.21
SMG1-216ENST00000569122 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
SMG1-216ENST00000569122 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
SMG1-216ENST00000569122 ATF3P18847 181 aa13.71□□□□□ -0.21
SMG1-216ENST00000569122 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
SMG1-216ENST00000569122 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
SMG1-216ENST00000569122 C19orf44Q9H6X5 657 aa13.7□□□□□ -0.22
SMG1-216ENST00000569122 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
SMG1-216ENST00000569122 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
SMG1-216ENST00000569122 TET3O43151 1660 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms