RNA–Protein interactions for RNA: ENST00000566617.1

COX4I1-212, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-212ENST00000566617 ERBINQ96RT1 1412 aa43.36■■■■■ 4.53
COX4I1-212ENST00000566617 RNF17Q9BXT8 1623 aaKnown RBP43.36■■■■■ 4.53
COX4I1-212ENST00000566617 C3P01024 1663 aa43.34■■■■■ 4.53
COX4I1-212ENST00000566617 PTPRKQ15262 1439 aa43.32■■■■■ 4.53
COX4I1-212ENST00000566617 CLTCQ00610 1675 aaKnown RBP43.32■■■■■ 4.53
COX4I1-212ENST00000566617 SETD1BQ9UPS6 1966 aaKnown RBP43.29■■■■■ 4.52
COX4I1-212ENST00000566617 ROCK1Q13464 1354 aa43.28■■■■■ 4.52
COX4I1-212ENST00000566617 ZMYM3Q14202 1370 aa43.28■■■■■ 4.52
COX4I1-212ENST00000566617 CEBPAP49715 358 aaPredicted RBP43.27■■■■■ 4.52
COX4I1-212ENST00000566617 KDM5DQ9BY66 1539 aa43.24■■■■■ 4.51
COX4I1-212ENST00000566617 PLPPR3Q6T4P5 718 aa43.21■■■■■ 4.51
COX4I1-212ENST00000566617 MROH1Q8NDA8 1641 aa43.21■■■■■ 4.51
COX4I1-212ENST00000566617 WASHC2CQ9Y4E1 1318 aa43.19■■■■■ 4.5
COX4I1-212ENST00000566617 NPATQ14207 1427 aa43.17■■■■■ 4.5
COX4I1-212ENST00000566617 DEPDC5O75140 1603 aa43.17■■■■■ 4.5
COX4I1-212ENST00000566617 ZC3H13Q5T200 1668 aaKnown RBP43.17■■■■■ 4.5
COX4I1-212ENST00000566617 PRDM15P57071 1507 aaPredicted RBP43.14■■■■■ 4.5
COX4I1-212ENST00000566617 PREX1Q8TCU6 1659 aa43.14■■■■■ 4.5
COX4I1-212ENST00000566617 ANKRD50Q9ULJ7 1429 aa43.14■■■■■ 4.5
COX4I1-212ENST00000566617 LMTK3Q96Q04 1460 aa43.13■■■■■ 4.49
COX4I1-212ENST00000566617 ITGAEP38570 1179 aa43.11■■■■■ 4.49
COX4I1-212ENST00000566617 ABCC3O15438 1527 aa43.1■■■■■ 4.49
COX4I1-212ENST00000566617 PZPP20742 1482 aa43.04■■■■■ 4.48
COX4I1-212ENST00000566617 KANK1Q14678 1352 aa43.01■■■■■ 4.48
COX4I1-212ENST00000566617 CEP152O94986 1710 aa43■■■■■ 4.47
COX4I1-212ENST00000566617 VWDEQ8N2E2 1590 aa43■■■■■ 4.47
COX4I1-212ENST00000566617 UHRF1BP1Q6BDS2 1440 aa43■■■■■ 4.47
COX4I1-212ENST00000566617 CAMSAP1Q5T5Y3 1602 aa42.96■■■■■ 4.47
COX4I1-212ENST00000566617 LMTK2Q8IWU2 1503 aa42.95■■■■■ 4.47
COX4I1-212ENST00000566617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.94■■■■■ 4.46
COX4I1-212ENST00000566617 ARHGAP31Q2M1Z3 1444 aa42.93■■■■■ 4.46
COX4I1-212ENST00000566617 UNC13BO14795 1591 aa42.9■■■■■ 4.46
COX4I1-212ENST00000566617 FBXO31Q5XUX0 539 aaPredicted RBP42.87■■■■■ 4.45
COX4I1-212ENST00000566617 MYO3AQ8NEV4 1616 aa42.86■■■■■ 4.45
COX4I1-212ENST00000566617 NAIPQ13075 1403 aa42.84■■■■■ 4.45
COX4I1-212ENST00000566617 GCC2Q8IWJ2 1684 aa42.84■■■■■ 4.45
COX4I1-212ENST00000566617 SPATA31D1Q6ZQQ2 1576 aa42.83■■■■■ 4.45
COX4I1-212ENST00000566617 ZNF142P52746 1687 aaPredicted RBP42.82■■■■■ 4.45
COX4I1-212ENST00000566617 TNRQ92752 1358 aa42.82■■■■■ 4.45
COX4I1-212ENST00000566617 HFM1A2PYH4 1435 aa42.81■■■■■ 4.44
COX4I1-212ENST00000566617 HSPA2P54652 639 aa42.81■■■■■ 4.44
COX4I1-212ENST00000566617 ERVK-7P63135 1459 aa42.78■■■■■ 4.44
COX4I1-212ENST00000566617 CEP170BQ9Y4F5 1589 aaPredicted RBP42.76■■■■■ 4.44
COX4I1-212ENST00000566617 EFCAB6Q5THR3 1501 aa42.76■■■■■ 4.44
COX4I1-212ENST00000566617 CFAP65Q6ZU64 1925 aaKnown RBP42.75■■■■■ 4.43
COX4I1-212ENST00000566617 IQGAP3Q86VI3 1631 aa42.74■■■■■ 4.43
COX4I1-212ENST00000566617 NLRP1Q9C000 1473 aa42.74■■■■■ 4.43
COX4I1-212ENST00000566617 TET3O43151 1660 aa42.73■■■■■ 4.43
COX4I1-212ENST00000566617 A2ML1A8K2U0 1454 aa42.73■■■■■ 4.43
COX4I1-212ENST00000566617 RPRD2Q5VT52 1461 aaKnown RBP42.7■■■■■ 4.43
COX4I1-212ENST00000566617 NUP155O75694 1391 aa42.67■■■■■ 4.42
COX4I1-212ENST00000566617 STRCQ7RTU9 1775 aa42.62■■■■■ 4.41
COX4I1-212ENST00000566617 NOS1P29475 1434 aa42.6■■■■■ 4.41
COX4I1-212ENST00000566617 PLA2R1Q13018 1463 aa42.59■■■■■ 4.41
COX4I1-212ENST00000566617 E9PCH4 1651 aa42.54■■■■■ 4.4
COX4I1-212ENST00000566617 UGGT1Q9NYU2 1555 aa42.54■■■■■ 4.4
COX4I1-212ENST00000566617 THEMISQ8N1K5 641 aaPredicted RBP42.52■■■■■ 4.4
COX4I1-212ENST00000566617 DMRT2Q9Y5R5 561 aa42.52■■■■■ 4.4
COX4I1-212ENST00000566617 SYNMO15061 1565 aa42.5■■■■■ 4.39
COX4I1-212ENST00000566617 ACIN1Q9UKV3 1341 aaKnown RBP42.48■■■■■ 4.39
COX4I1-212ENST00000566617 PKD2Q13563 968 aa42.47■■■■■ 4.39
COX4I1-212ENST00000566617 SLC52A1Q9NWF4 448 aa42.46■■■■■ 4.39
COX4I1-212ENST00000566617 KDM5AP29375 1690 aaKnown RBP42.46■■■■■ 4.39
COX4I1-212ENST00000566617 UBR1Q8IWV7 1749 aa42.46■■■■■ 4.39
COX4I1-212ENST00000566617 PTPRTO14522 1441 aa42.43■■■■■ 4.38
COX4I1-212ENST00000566617 SETD5Q9C0A6 1442 aa42.42■■■■■ 4.38
COX4I1-212ENST00000566617 IDI1Q13907 227 aa42.41■■■■■ 4.38
COX4I1-212ENST00000566617 PIK3C2BO00750 1634 aa42.41■■■■■ 4.38
COX4I1-212ENST00000566617 TRIM52Q96A61 297 aa42.39■■■■■ 4.38
COX4I1-212ENST00000566617 NCKAP5LQ9HCH0 1330 aa42.34■■■■■ 4.37
COX4I1-212ENST00000566617 POLR1AO95602 1720 aaPredicted RBP42.34■■■■■ 4.37
COX4I1-212ENST00000566617 ANKLE2Q86XL3 938 aa42.32■■■■■ 4.37
COX4I1-212ENST00000566617 SLIT1O75093 1534 aa42.3■■■■■ 4.36
COX4I1-212ENST00000566617 SPHKAPQ2M3C7 1700 aa42.29■■■■■ 4.36
COX4I1-212ENST00000566617 ARHGAP23Q9P227 1491 aa42.29■■■■■ 4.36
COX4I1-212ENST00000566617 ADGRB3O60242 1522 aa42.27■■■■■ 4.36
COX4I1-212ENST00000566617 SLC4A1APQ9BWU0 796 aaKnown RBP42.26■■■■■ 4.36
COX4I1-212ENST00000566617 STAG3Q9UJ98 1225 aa42.26■■■■■ 4.36
COX4I1-212ENST00000566617 NEURL4Q96JN8 1562 aa42.25■■■■■ 4.35
COX4I1-212ENST00000566617 MED14O60244 1454 aa42.24■■■■■ 4.35
COX4I1-212ENST00000566617 HRCP23327 699 aa42.23■■■■■ 4.35
COX4I1-212ENST00000566617 RAB3GAP2Q9H2M9 1393 aa42.23■■■■■ 4.35
COX4I1-212ENST00000566617 TMEM2Q9UHN6 1383 aa42.21■■■■■ 4.35
COX4I1-212ENST00000566617 TMEM131LA2VDJ0 1609 aa42.2■■■■■ 4.35
COX4I1-212ENST00000566617 TRPM2O94759 1503 aa42.16■■■■■ 4.34
COX4I1-212ENST00000566617 MPHOSPH9Q99550 1183 aa42.16■■■■■ 4.34
COX4I1-212ENST00000566617 SCAF11Q99590 1463 aaKnown RBP42.15■■■■■ 4.34
COX4I1-212ENST00000566617 MYO5BQ9ULV0 1848 aa42.13■■■■■ 4.34
COX4I1-212ENST00000566617 NPHP4O75161 1426 aaPredicted RBP42.12■■■■■ 4.33
COX4I1-212ENST00000566617 TXNDC2Q86VQ3 553 aa42.12■■■■■ 4.33
COX4I1-212ENST00000566617 EID1Q9Y6B2 187 aa42.12■■■■■ 4.33
COX4I1-212ENST00000566617 LTKP29376 864 aa42.1■■■■■ 4.33
COX4I1-212ENST00000566617 IQGAP1P46940 1657 aa42.09■■■■■ 4.33
COX4I1-212ENST00000566617 CLTCL1P53675 1640 aa42.05■■■■■ 4.32
COX4I1-212ENST00000566617 HDGFP51858 240 aaKnown RBP42.03■■■■■ 4.32
COX4I1-212ENST00000566617 ZFYVE9O95405 1425 aa42.03■■■■■ 4.32
COX4I1-212ENST00000566617 CHGAP10645 457 aaKnown RBP42■■■■■ 4.31
COX4I1-212ENST00000566617 KIF1BO60333 1816 aa41.99■■■■■ 4.31
COX4I1-212ENST00000566617 LTBP4Q8N2S1 1624 aa41.98■■■■■ 4.31
COX4I1-212ENST00000566617 RIMS2Q9UQ26 1411 aa41.97■■■■■ 4.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms