RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 L3MBTL2Q969R5 705 aa3.72□□□□□ -1.81
CHD9-218ENST00000566029 MCM4P33991 863 aa3.72□□□□□ -1.81
CHD9-218ENST00000566029 DENND4BO75064 1496 aaPredicted RBP3.72□□□□□ -1.81
CHD9-218ENST00000566029 KTN1Q86UP2 1357 aaKnown RBP3.72□□□□□ -1.81
CHD9-218ENST00000566029 GTF2E1P29083 439 aaPredicted RBP3.72□□□□□ -1.81
CHD9-218ENST00000566029 ISY1Q9ULR0 285 aaKnown RBP3.72□□□□□ -1.81
CHD9-218ENST00000566029 WIZO95785 1651 aa3.72□□□□□ -1.81
CHD9-218ENST00000566029 DMTNQ08495 405 aa3.72□□□□□ -1.81
CHD9-218ENST00000566029 FAM50AQ14320 339 aaKnown RBP3.72□□□□□ -1.81
CHD9-218ENST00000566029 TIAM1Q13009 1591 aa3.72□□□□□ -1.81
CHD9-218ENST00000566029 CENPQQ7L2Z9 268 aaPredicted RBP3.71□□□□□ -1.81
CHD9-218ENST00000566029 PANK2Q9BZ23 570 aa3.71□□□□□ -1.81
CHD9-218ENST00000566029 NAIPQ13075 1403 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 FGD6Q6ZV73 1430 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 TMEM51Q9NW97 253 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 KIAA1211Q6ZU35 1233 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 SCAPERQ9BY12 1400 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 TTLL5Q6EMB2 1281 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 PPP1R9BQ96SB3 815 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 ZSCAN30Q86W11 494 aa3.71□□□□□ -1.82
CHD9-218ENST00000566029 HOXC8P31273 242 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 TMCO4Q5TGY1 634 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 TNNT3P45378 269 aaPredicted RBP3.7□□□□□ -1.82
CHD9-218ENST00000566029 RSPH4AQ5TD94 716 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 RTEL1-TNFRSF6BF6WH68 1400 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 KAT6BQ8WYB5 2073 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 ARID3CA6NKF2 412 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 BLMP54132 1417 aaPredicted RBP3.7□□□□□ -1.82
CHD9-218ENST00000566029 BBXQ8WY36 941 aaPredicted RBP3.7□□□□□ -1.82
CHD9-218ENST00000566029 E9PSI1 815 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 C20orf194Q5TEA3 1177 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 TMX1Q9H3N1 280 aa3.7□□□□□ -1.82
CHD9-218ENST00000566029 ZHX1Q9UKY1 873 aaPredicted RBP3.7□□□□□ -1.82
CHD9-218ENST00000566029 DDIT3P35638 169 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 ZNF692Q9BU19 519 aaPredicted RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 TAF7LQ5H9L4 462 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 CCDC144AA2RUR9 1427 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 HS1BP3Q53T59 392 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 ZNF830Q96NB3 372 aaPredicted RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 EIF3AQ14152 1382 aaKnown RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 MYBBP1AQ9BQG0 1328 aaKnown RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 CCDC94Q9BW85 323 aaPredicted RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 IGF1RP08069 1367 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 ARHGAP31Q2M1Z3 1444 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 MIA2Q96PC5 1412 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 ATXN8OSP0DMR3 200 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 PPP4R3BQ5MIZ7 849 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 SMYD5Q6GMV2 418 aa3.69□□□□□ -1.82
CHD9-218ENST00000566029 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 CHMP4BQ9H444 224 aaKnown RBP3.69□□□□□ -1.82
CHD9-218ENST00000566029 NLRP1Q9C000 1473 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 HSP90AB1P08238 724 aaKnown RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 ZSCAN20P17040 1043 aaPredicted RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 ANKRD30BQ9BXX2 1392 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 IBTKQ9P2D0 1353 aaPredicted RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 HSP90B1P14625 803 aaKnown RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 GAS2L3Q86XJ1 694 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 NCOA3Q9Y6Q9 1424 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 VGFO15240 615 aaPredicted RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 TRAK2O60296 914 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 ZNF500O60304 480 aaPredicted RBP3.68□□□□□ -1.82
CHD9-218ENST00000566029 SASS6Q6UVJ0 657 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 GRPEL1Q9HAV7 217 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 CCDC173Q0VFZ6 552 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 CHMP5Q9NZZ3 219 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 TEX14Q8IWB6 1497 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 ZMYM3Q14202 1370 aa3.68□□□□□ -1.82
CHD9-218ENST00000566029 TMEM132AQ24JP5 1023 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 GTPBP4Q9BZE4 634 aaKnown RBP3.67□□□□□ -1.82
CHD9-218ENST00000566029 ZMYM4Q5VZL5 1548 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 ZNF710Q8N1W2 664 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 BECN1Q14457 450 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 TBC1D2Q9BYX2 928 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 CASKIN1Q8WXD9 1431 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 KIF15Q9NS87 1388 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 KIF27Q86VH2 1401 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 PARD3Q8TEW0 1356 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 PLIN1O60240 522 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 KIF20AO95235 890 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 IBSPP21815 317 aaPredicted RBP3.67□□□□□ -1.82
CHD9-218ENST00000566029 CDCA7LQ96GN5 454 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 MYH16Q9H6N6 1097 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 RALBP1Q15311 655 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 MTERF4Q7Z6M4 381 aaKnown RBP3.67□□□□□ -1.82
CHD9-218ENST00000566029 PDLIM2Q96JY6 352 aa3.67□□□□□ -1.82
CHD9-218ENST00000566029 TCOF1Q13428 1488 aaKnown RBP3.66□□□□□ -1.82
CHD9-218ENST00000566029 R3HCC1Q9Y3T6 440 aaKnown RBP3.66□□□□□ -1.82
CHD9-218ENST00000566029 DYNC1I1O14576 645 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 AEBP1Q8IUX7 1158 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 MBD5Q9P267 1494 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 KCTD17Q8N5Z5 321 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 SRRTQ9BXP5 876 aaKnown RBP3.66□□□□□ -1.82
CHD9-218ENST00000566029 PRDM10Q9NQV6 1147 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 MCM5P33992 734 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 CIZ1Q9ULV3 898 aaPredicted RBP3.66□□□□□ -1.82
CHD9-218ENST00000566029 CUX1P39880 1505 aa3.66□□□□□ -1.82
CHD9-218ENST00000566029 TRMT2AQ8IZ69 625 aaKnown RBP3.66□□□□□ -1.82
CHD9-218ENST00000566029 ZNF521Q96K83 1311 aa3.65□□□□□ -1.82
CHD9-218ENST00000566029 SEC24BO95487 1268 aa3.65□□□□□ -1.82
CHD9-218ENST00000566029 RPRD2Q5VT52 1461 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms