RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
CMTM3-208ENST00000564247 DAPK1P53355 1430 aa25.48■■□□□ 1.67
CMTM3-208ENST00000564247 HSPA2P54652 639 aa25.48■■□□□ 1.67
CMTM3-208ENST00000564247 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
CMTM3-208ENST00000564247 UHRF1BP1Q6BDS2 1440 aa25.47■■□□□ 1.67
CMTM3-208ENST00000564247 NPATQ14207 1427 aa25.46■■□□□ 1.67
CMTM3-208ENST00000564247 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.67
CMTM3-208ENST00000564247 DUOX2Q9NRD8 1548 aa25.44■■□□□ 1.66
CMTM3-208ENST00000564247 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
CMTM3-208ENST00000564247 KDM5DQ9BY66 1539 aa25.42■■□□□ 1.66
CMTM3-208ENST00000564247 CHIC2Q9UKJ5 165 aa25.42■■□□□ 1.66
CMTM3-208ENST00000564247 KIF15Q9NS87 1388 aa25.41■■□□□ 1.66
CMTM3-208ENST00000564247 PTPRKQ15262 1439 aa25.4■■□□□ 1.66
CMTM3-208ENST00000564247 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
CMTM3-208ENST00000564247 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
CMTM3-208ENST00000564247 RRP7BPQ9NSQ0 103 aa25.36■■□□□ 1.65
CMTM3-208ENST00000564247 ANKRD30AQ9BXX3 1397 aa25.35■■□□□ 1.65
CMTM3-208ENST00000564247 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
CMTM3-208ENST00000564247 ZC3H13Q5T200 1668 aaKnown RBP25.34■■□□□ 1.65
CMTM3-208ENST00000564247 NCOA1Q15788 1441 aa25.33■■□□□ 1.65
CMTM3-208ENST00000564247 ADGRL2O95490 1459 aa25.33■■□□□ 1.65
CMTM3-208ENST00000564247 PZPP20742 1482 aa25.33■■□□□ 1.65
CMTM3-208ENST00000564247 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
CMTM3-208ENST00000564247 MYO3AQ8NEV4 1616 aa25.32■■□□□ 1.64
CMTM3-208ENST00000564247 ABCC3O15438 1527 aa25.31■■□□□ 1.64
CMTM3-208ENST00000564247 STRCQ7RTU9 1775 aa25.31■■□□□ 1.64
CMTM3-208ENST00000564247 ZNF142P52746 1687 aaPredicted RBP25.3■■□□□ 1.64
CMTM3-208ENST00000564247 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-208ENST00000564247 DEPDC5O75140 1603 aa25.27■■□□□ 1.64
CMTM3-208ENST00000564247 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-208ENST00000564247 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
CMTM3-208ENST00000564247 CEP152O94986 1710 aa25.26■■□□□ 1.63
CMTM3-208ENST00000564247 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
CMTM3-208ENST00000564247 HFM1A2PYH4 1435 aa25.23■■□□□ 1.63
CMTM3-208ENST00000564247 TNRQ92752 1358 aa25.23■■□□□ 1.63
CMTM3-208ENST00000564247 DMRT2Q9Y5R5 561 aa25.23■■□□□ 1.63
CMTM3-208ENST00000564247 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
CMTM3-208ENST00000564247 A2ML1A8K2U0 1454 aa25.21■■□□□ 1.63
CMTM3-208ENST00000564247 NAIPQ13075 1403 aa25.2■■□□□ 1.63
CMTM3-208ENST00000564247 KANK1Q14678 1352 aa25.18■■□□□ 1.62
CMTM3-208ENST00000564247 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
CMTM3-208ENST00000564247 SPATA31D1Q6ZQQ2 1576 aa25.18■■□□□ 1.62
CMTM3-208ENST00000564247 PLA2R1Q13018 1463 aa25.17■■□□□ 1.62
CMTM3-208ENST00000564247 HRCP23327 699 aa25.17■■□□□ 1.62
CMTM3-208ENST00000564247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.62
CMTM3-208ENST00000564247 PTPRTO14522 1441 aa25.17■■□□□ 1.62
CMTM3-208ENST00000564247 ARHGAP31Q2M1Z3 1444 aa25.17■■□□□ 1.62
CMTM3-208ENST00000564247 ACIN1Q9UKV3 1341 aaKnown RBP25.16■■□□□ 1.62
CMTM3-208ENST00000564247 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
CMTM3-208ENST00000564247 VWDEQ8N2E2 1590 aa25.16■■□□□ 1.62
CMTM3-208ENST00000564247 ERVK-7P63135 1459 aa25.15■■□□□ 1.62
CMTM3-208ENST00000564247 GCC2Q8IWJ2 1684 aa25.15■■□□□ 1.62
CMTM3-208ENST00000564247 CFAP65Q6ZU64 1925 aaKnown RBP25.15■■□□□ 1.62
CMTM3-208ENST00000564247 LMTK2Q8IWU2 1503 aa25.14■■□□□ 1.62
CMTM3-208ENST00000564247 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.61
CMTM3-208ENST00000564247 PKD2Q13563 968 aa25.1■■□□□ 1.61
CMTM3-208ENST00000564247 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.6
CMTM3-208ENST00000564247 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
CMTM3-208ENST00000564247 ILDR1Q86SU0 546 aaPredicted RBP25.06■■□□□ 1.6
CMTM3-208ENST00000564247 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
CMTM3-208ENST00000564247 UNC13BO14795 1591 aa25.05■■□□□ 1.6
CMTM3-208ENST00000564247 THEMISQ8N1K5 641 aaPredicted RBP25.05■■□□□ 1.6
CMTM3-208ENST00000564247 EFCAB6Q5THR3 1501 aa25.05■■□□□ 1.6
CMTM3-208ENST00000564247 POLR1AO95602 1720 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-208ENST00000564247 TET3O43151 1660 aa25■■□□□ 1.59
CMTM3-208ENST00000564247 UBR1Q8IWV7 1749 aa25■■□□□ 1.59
CMTM3-208ENST00000564247 CERKQ8TCT0 537 aa24.99■■□□□ 1.59
CMTM3-208ENST00000564247 RPRD2Q5VT52 1461 aaKnown RBP24.98■■□□□ 1.59
CMTM3-208ENST00000564247 FBXO41Q8TF61 875 aa24.98■■□□□ 1.59
CMTM3-208ENST00000564247 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
CMTM3-208ENST00000564247 NOS1P29475 1434 aa24.97■■□□□ 1.59
CMTM3-208ENST00000564247 ANKLE2Q86XL3 938 aa24.97■■□□□ 1.59
CMTM3-208ENST00000564247 IQGAP3Q86VI3 1631 aa24.96■■□□□ 1.59
CMTM3-208ENST00000564247 SYNMO15061 1565 aa24.95■■□□□ 1.58
CMTM3-208ENST00000564247 PIK3C2BO00750 1634 aa24.94■■□□□ 1.58
CMTM3-208ENST00000564247 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
CMTM3-208ENST00000564247 NUP155O75694 1391 aa24.93■■□□□ 1.58
CMTM3-208ENST00000564247 KDM5AP29375 1690 aaKnown RBP24.93■■□□□ 1.58
CMTM3-208ENST00000564247 MED14O60244 1454 aa24.92■■□□□ 1.58
CMTM3-208ENST00000564247 E9PCH4 1651 aa24.89■■□□□ 1.58
CMTM3-208ENST00000564247 IDI1Q13907 227 aa24.89■■□□□ 1.58
CMTM3-208ENST00000564247 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.58
CMTM3-208ENST00000564247 SLC4A1APQ9BWU0 796 aaKnown RBP24.89■■□□□ 1.58
CMTM3-208ENST00000564247 SLC52A1Q9NWF4 448 aa24.89■■□□□ 1.58
CMTM3-208ENST00000564247 SLIT1O75093 1534 aa24.89■■□□□ 1.57
CMTM3-208ENST00000564247 ARHGAP23Q9P227 1491 aa24.89■■□□□ 1.57
CMTM3-208ENST00000564247 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
CMTM3-208ENST00000564247 NPHP4O75161 1426 aaPredicted RBP24.87■■□□□ 1.57
CMTM3-208ENST00000564247 ZNF335Q9H4Z2 1342 aaPredicted RBP24.86■■□□□ 1.57
CMTM3-208ENST00000564247 IQGAP1P46940 1657 aa24.86■■□□□ 1.57
CMTM3-208ENST00000564247 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
CMTM3-208ENST00000564247 SCAF11Q99590 1463 aaKnown RBP24.84■■□□□ 1.57
CMTM3-208ENST00000564247 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
CMTM3-208ENST00000564247 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.57
CMTM3-208ENST00000564247 ADGRB3O60242 1522 aa24.83■■□□□ 1.57
CMTM3-208ENST00000564247 TMEM2Q9UHN6 1383 aa24.82■■□□□ 1.56
CMTM3-208ENST00000564247 LTKP29376 864 aa24.81■■□□□ 1.56
CMTM3-208ENST00000564247 TXNDC2Q86VQ3 553 aa24.81■■□□□ 1.56
CMTM3-208ENST00000564247 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
CMTM3-208ENST00000564247 MYO5BQ9ULV0 1848 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms