RNA–Protein interactions for RNA: ENST00000562200.5

COG4-209, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 2

Gene COG4, Length 885 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-209ENST00000562200 CCDC18Q5T9S5 1454 aa23.8■■□□□ 1.4
COG4-209ENST00000562200 NPHP4O75161 1426 aaPredicted RBP23.79■■□□□ 1.4
COG4-209ENST00000562200 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
COG4-209ENST00000562200 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
COG4-209ENST00000562200 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
COG4-209ENST00000562200 POTEAQ6S8J7 498 aa23.75■■□□□ 1.39
COG4-209ENST00000562200 CASKIN1Q8WXD9 1431 aa23.73■■□□□ 1.39
COG4-209ENST00000562200 MED14O60244 1454 aa23.73■■□□□ 1.39
COG4-209ENST00000562200 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
COG4-209ENST00000562200 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
COG4-209ENST00000562200 KIF3BO15066 747 aa23.72■■□□□ 1.39
COG4-209ENST00000562200 WASHC2CQ9Y4E1 1318 aa23.72■■□□□ 1.39
COG4-209ENST00000562200 FAM135AQ9P2D6 1515 aa23.71■■□□□ 1.39
COG4-209ENST00000562200 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
COG4-209ENST00000562200 DHX29Q7Z478 1369 aaKnown RBP23.68■■□□□ 1.38
COG4-209ENST00000562200 CCNB3Q8WWL7 1395 aa23.68■■□□□ 1.38
COG4-209ENST00000562200 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
COG4-209ENST00000562200 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
COG4-209ENST00000562200 PZPP20742 1482 aa23.68■■□□□ 1.38
COG4-209ENST00000562200 NLRP1Q9C000 1473 aa23.67■■□□□ 1.38
COG4-209ENST00000562200 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
COG4-209ENST00000562200 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
COG4-209ENST00000562200 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
COG4-209ENST00000562200 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
COG4-209ENST00000562200 RTEL1-TNFRSF6BF6WH68 1400 aa23.6■■□□□ 1.37
COG4-209ENST00000562200 STRCP1A6NGW2 1772 aa23.6■■□□□ 1.37
COG4-209ENST00000562200 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
COG4-209ENST00000562200 SYNMO15061 1565 aa23.59■■□□□ 1.37
COG4-209ENST00000562200 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
COG4-209ENST00000562200 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
COG4-209ENST00000562200 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
COG4-209ENST00000562200 MBD5Q9P267 1494 aa23.52■■□□□ 1.36
COG4-209ENST00000562200 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
COG4-209ENST00000562200 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
COG4-209ENST00000562200 RSPH4AQ5TD94 716 aa23.48■■□□□ 1.35
COG4-209ENST00000562200 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.35
COG4-209ENST00000562200 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
COG4-209ENST00000562200 LTKP29376 864 aa23.45■■□□□ 1.34
COG4-209ENST00000562200 SCAF11Q99590 1463 aaKnown RBP23.44■■□□□ 1.34
COG4-209ENST00000562200 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
COG4-209ENST00000562200 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
COG4-209ENST00000562200 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
COG4-209ENST00000562200 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
COG4-209ENST00000562200 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
COG4-209ENST00000562200 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
COG4-209ENST00000562200 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
COG4-209ENST00000562200 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
COG4-209ENST00000562200 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
COG4-209ENST00000562200 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
COG4-209ENST00000562200 JCADQ9P266 1359 aa23.37■■□□□ 1.33
COG4-209ENST00000562200 KCNA6P17658 529 aa23.36■■□□□ 1.33
COG4-209ENST00000562200 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
COG4-209ENST00000562200 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
COG4-209ENST00000562200 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
COG4-209ENST00000562200 RBM33Q96EV2 1170 aaKnown RBP23.35■■□□□ 1.33
COG4-209ENST00000562200 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
COG4-209ENST00000562200 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
COG4-209ENST00000562200 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
COG4-209ENST00000562200 ABCC3O15438 1527 aa23.32■■□□□ 1.32
COG4-209ENST00000562200 NCOA2Q15596 1464 aa23.31■■□□□ 1.32
COG4-209ENST00000562200 LRRC9Q6ZRR7 1453 aa23.31■■□□□ 1.32
COG4-209ENST00000562200 ARHGAP23Q9P227 1491 aa23.31■■□□□ 1.32
COG4-209ENST00000562200 UBR1Q8IWV7 1749 aa23.31■■□□□ 1.32
COG4-209ENST00000562200 SLIT1O75093 1534 aa23.3■■□□□ 1.32
COG4-209ENST00000562200 RXRBP28702 533 aa23.29■■□□□ 1.32
COG4-209ENST00000562200 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
COG4-209ENST00000562200 MSH6P52701 1360 aa23.27■■□□□ 1.32
COG4-209ENST00000562200 SLC26A8Q96RN1 970 aa23.27■■□□□ 1.32
COG4-209ENST00000562200 SPATA31A6Q5VVP1 1343 aa23.27■■□□□ 1.32
COG4-209ENST00000562200 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
COG4-209ENST00000562200 TMEM2Q9UHN6 1383 aa23.26■■□□□ 1.31
COG4-209ENST00000562200 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
COG4-209ENST00000562200 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
COG4-209ENST00000562200 BCANQ96GW7 911 aa23.23■■□□□ 1.31
COG4-209ENST00000562200 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
COG4-209ENST00000562200 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
COG4-209ENST00000562200 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
COG4-209ENST00000562200 ARHGEF5Q12774 1597 aa23.16■■□□□ 1.3
COG4-209ENST00000562200 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
COG4-209ENST00000562200 LRP6O75581 1613 aa23.15■■□□□ 1.3
COG4-209ENST00000562200 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.29
COG4-209ENST00000562200 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
COG4-209ENST00000562200 IDI1Q13907 227 aa23.13■■□□□ 1.29
COG4-209ENST00000562200 CEP152O94986 1710 aa23.13■■□□□ 1.29
COG4-209ENST00000562200 EIF2AK4Q9P2K8 1649 aaKnown RBP23.12■■□□□ 1.29
COG4-209ENST00000562200 NUTM2BA6NNL0 878 aaPredicted RBP23.12■■□□□ 1.29
COG4-209ENST00000562200 NUTM2EB1AL46 878 aaPredicted RBP23.12■■□□□ 1.29
COG4-209ENST00000562200 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
COG4-209ENST00000562200 NUTM2AQ8IVF1 878 aaPredicted RBP23.12■■□□□ 1.29
COG4-209ENST00000562200 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
COG4-209ENST00000562200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.292e-6■■□□□ 12.6
COG4-209ENST00000562200 TET3O43151 1660 aa23.1■■□□□ 1.29
COG4-209ENST00000562200 FOXD1Q16676 465 aa23.1■■□□□ 1.29
COG4-209ENST00000562200 PIK3C2BO00750 1634 aa23.1■■□□□ 1.29
COG4-209ENST00000562200 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
COG4-209ENST00000562200 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
COG4-209ENST00000562200 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.29
COG4-209ENST00000562200 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.29
COG4-209ENST00000562200 NUTM2DQ5VT03 806 aaPredicted RBP23.07■■□□□ 1.28
COG4-209ENST00000562200 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms