RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
RABGGTA-219ENST00000560871 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
RABGGTA-219ENST00000560871 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
RABGGTA-219ENST00000560871 PTPRKQ15262 1439 aa23.83■■□□□ 1.4
RABGGTA-219ENST00000560871 KIF15Q9NS87 1388 aa23.82■■□□□ 1.4
RABGGTA-219ENST00000560871 NPATQ14207 1427 aa23.81■■□□□ 1.4
RABGGTA-219ENST00000560871 NCOA1Q15788 1441 aa23.8■■□□□ 1.4
RABGGTA-219ENST00000560871 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
RABGGTA-219ENST00000560871 STRCQ7RTU9 1775 aa23.79■■□□□ 1.4
RABGGTA-219ENST00000560871 KIF3BO15066 747 aa23.78■■□□□ 1.4
RABGGTA-219ENST00000560871 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
RABGGTA-219ENST00000560871 ERBINQ96RT1 1412 aa23.77■■□□□ 1.4
RABGGTA-219ENST00000560871 ILDR1Q86SU0 546 aaPredicted RBP23.77■■□□□ 1.4
RABGGTA-219ENST00000560871 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
RABGGTA-219ENST00000560871 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
RABGGTA-219ENST00000560871 CHIC2Q9UKJ5 165 aa23.75■■□□□ 1.39
RABGGTA-219ENST00000560871 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
RABGGTA-219ENST00000560871 ROCK1Q13464 1354 aa23.72■■□□□ 1.39
RABGGTA-219ENST00000560871 DEPDC5O75140 1603 aa23.71■■□□□ 1.39
RABGGTA-219ENST00000560871 KDM5DQ9BY66 1539 aa23.71■■□□□ 1.39
RABGGTA-219ENST00000560871 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.39
RABGGTA-219ENST00000560871 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
RABGGTA-219ENST00000560871 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.38
RABGGTA-219ENST00000560871 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
RABGGTA-219ENST00000560871 DMRT2Q9Y5R5 561 aa23.66■■□□□ 1.38
RABGGTA-219ENST00000560871 WASHC2CQ9Y4E1 1318 aa23.65■■□□□ 1.38
RABGGTA-219ENST00000560871 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
RABGGTA-219ENST00000560871 ABCC3O15438 1527 aa23.64■■□□□ 1.38
RABGGTA-219ENST00000560871 PZPP20742 1482 aa23.63■■□□□ 1.37
RABGGTA-219ENST00000560871 CAMSAP1Q5T5Y3 1602 aa23.63■■□□□ 1.37
RABGGTA-219ENST00000560871 ITGAEP38570 1179 aa23.63■■□□□ 1.37
RABGGTA-219ENST00000560871 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
RABGGTA-219ENST00000560871 PTPRTO14522 1441 aa23.62■■□□□ 1.37
RABGGTA-219ENST00000560871 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
RABGGTA-219ENST00000560871 CEP152O94986 1710 aa23.6■■□□□ 1.37
RABGGTA-219ENST00000560871 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
RABGGTA-219ENST00000560871 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
RABGGTA-219ENST00000560871 UNC13BO14795 1591 aa23.58■■□□□ 1.37
RABGGTA-219ENST00000560871 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
RABGGTA-219ENST00000560871 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
RABGGTA-219ENST00000560871 TNRQ92752 1358 aa23.56■■□□□ 1.36
RABGGTA-219ENST00000560871 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
RABGGTA-219ENST00000560871 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
RABGGTA-219ENST00000560871 NAIPQ13075 1403 aa23.54■■□□□ 1.36
RABGGTA-219ENST00000560871 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
RABGGTA-219ENST00000560871 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
RABGGTA-219ENST00000560871 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
RABGGTA-219ENST00000560871 SPATA31D1Q6ZQQ2 1576 aa23.5■■□□□ 1.35
RABGGTA-219ENST00000560871 PKD2Q13563 968 aa23.5■■□□□ 1.35
RABGGTA-219ENST00000560871 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
RABGGTA-219ENST00000560871 KANK1Q14678 1352 aa23.5■■□□□ 1.35
RABGGTA-219ENST00000560871 ARHGAP31Q2M1Z3 1444 aa23.5■■□□□ 1.35
RABGGTA-219ENST00000560871 NLRP1Q9C000 1473 aa23.49■■□□□ 1.35
RABGGTA-219ENST00000560871 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
RABGGTA-219ENST00000560871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.358e-7■■□□□ 14.1
RABGGTA-219ENST00000560871 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
RABGGTA-219ENST00000560871 POLR1AO95602 1720 aaPredicted RBP23.46■■□□□ 1.35
RABGGTA-219ENST00000560871 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
RABGGTA-219ENST00000560871 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
RABGGTA-219ENST00000560871 TET3O43151 1660 aa23.44■■□□□ 1.34
RABGGTA-219ENST00000560871 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
RABGGTA-219ENST00000560871 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
RABGGTA-219ENST00000560871 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
RABGGTA-219ENST00000560871 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
RABGGTA-219ENST00000560871 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
RABGGTA-219ENST00000560871 NUP155O75694 1391 aa23.36■■□□□ 1.33
RABGGTA-219ENST00000560871 E9PCH4 1651 aa23.35■■□□□ 1.33
RABGGTA-219ENST00000560871 NOS1P29475 1434 aa23.35■■□□□ 1.33
RABGGTA-219ENST00000560871 ANKLE2Q86XL3 938 aa23.35■■□□□ 1.33
RABGGTA-219ENST00000560871 SYNMO15061 1565 aa23.35■■□□□ 1.33
RABGGTA-219ENST00000560871 ZNF335Q9H4Z2 1342 aaPredicted RBP23.33■■□□□ 1.33
RABGGTA-219ENST00000560871 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.33
RABGGTA-219ENST00000560871 MED14O60244 1454 aa23.31■■□□□ 1.32
RABGGTA-219ENST00000560871 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
RABGGTA-219ENST00000560871 NPHP4O75161 1426 aaPredicted RBP23.27■■□□□ 1.32
RABGGTA-219ENST00000560871 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
RABGGTA-219ENST00000560871 IQGAP1P46940 1657 aa23.27■■□□□ 1.32
RABGGTA-219ENST00000560871 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
RABGGTA-219ENST00000560871 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
RABGGTA-219ENST00000560871 SLIT1O75093 1534 aa23.24■■□□□ 1.31
RABGGTA-219ENST00000560871 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
RABGGTA-219ENST00000560871 IDI1Q13907 227 aa23.21■■□□□ 1.31
RABGGTA-219ENST00000560871 ADGRB3O60242 1522 aa23.21■■□□□ 1.31
RABGGTA-219ENST00000560871 SPHKAPQ2M3C7 1700 aa23.21■■□□□ 1.31
RABGGTA-219ENST00000560871 CPS1P31327 1500 aa23.19■■□□□ 1.3
RABGGTA-219ENST00000560871 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
RABGGTA-219ENST00000560871 LTKP29376 864 aa23.18■■□□□ 1.3
RABGGTA-219ENST00000560871 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
RABGGTA-219ENST00000560871 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
RABGGTA-219ENST00000560871 TRPM2O94759 1503 aa23.17■■□□□ 1.3
RABGGTA-219ENST00000560871 TXNDC2Q86VQ3 553 aa23.16■■□□□ 1.3
RABGGTA-219ENST00000560871 TMEM2Q9UHN6 1383 aa23.15■■□□□ 1.3
RABGGTA-219ENST00000560871 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
RABGGTA-219ENST00000560871 STAG3Q9UJ98 1225 aa23.15■■□□□ 1.3
RABGGTA-219ENST00000560871 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
RABGGTA-219ENST00000560871 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
RABGGTA-219ENST00000560871 TMEM131LA2VDJ0 1609 aa23.13■■□□□ 1.29
RABGGTA-219ENST00000560871 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
RABGGTA-219ENST00000560871 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
RABGGTA-219ENST00000560871 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms