RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 ARID4BQ4LE39 1312 aaPredicted RBP18.58■□□□□ 0.56
CCDC33-205ENST00000558659 NUP155O75694 1391 aa18.57■□□□□ 0.56
CCDC33-205ENST00000558659 HRCP23327 699 aa18.55■□□□□ 0.56
CCDC33-205ENST00000558659 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
CCDC33-205ENST00000558659 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
CCDC33-205ENST00000558659 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.56
CCDC33-205ENST00000558659 PZPP20742 1482 aa18.51■□□□□ 0.55
CCDC33-205ENST00000558659 MROH1Q8NDA8 1641 aa18.5■□□□□ 0.55
CCDC33-205ENST00000558659 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
CCDC33-205ENST00000558659 PKD2Q13563 968 aa18.48■□□□□ 0.55
CCDC33-205ENST00000558659 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
CCDC33-205ENST00000558659 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
CCDC33-205ENST00000558659 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
CCDC33-205ENST00000558659 UNC13BO14795 1591 aa18.46■□□□□ 0.55
CCDC33-205ENST00000558659 AGLP35573 1532 aa18.46■□□□□ 0.54
CCDC33-205ENST00000558659 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.54
CCDC33-205ENST00000558659 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
CCDC33-205ENST00000558659 RNF17Q9BXT8 1623 aaKnown RBP18.43■□□□□ 0.54
CCDC33-205ENST00000558659 PRDM15P57071 1507 aaPredicted RBP18.43■□□□□ 0.54
CCDC33-205ENST00000558659 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
CCDC33-205ENST00000558659 SIN3AQ96ST3 1273 aa18.42■□□□□ 0.54
CCDC33-205ENST00000558659 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
CCDC33-205ENST00000558659 KANK1Q14678 1352 aa18.41■□□□□ 0.54
CCDC33-205ENST00000558659 BCORL1Q5H9F3 1711 aa18.41■□□□□ 0.54
CCDC33-205ENST00000558659 VWDEQ8N2E2 1590 aa18.41■□□□□ 0.54
CCDC33-205ENST00000558659 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
CCDC33-205ENST00000558659 ABCC3O15438 1527 aa18.39■□□□□ 0.53
CCDC33-205ENST00000558659 CEBPAP49715 358 aaPredicted RBP18.39■□□□□ 0.53
CCDC33-205ENST00000558659 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
CCDC33-205ENST00000558659 CEP152O94986 1710 aa18.39■□□□□ 0.53
CCDC33-205ENST00000558659 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
CCDC33-205ENST00000558659 CFAP65Q6ZU64 1925 aaKnown RBP18.36■□□□□ 0.53
CCDC33-205ENST00000558659 NPATQ14207 1427 aa18.35■□□□□ 0.53
CCDC33-205ENST00000558659 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
CCDC33-205ENST00000558659 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
CCDC33-205ENST00000558659 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
CCDC33-205ENST00000558659 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.53
CCDC33-205ENST00000558659 ZMYM3Q14202 1370 aa18.33■□□□□ 0.53
CCDC33-205ENST00000558659 E9PCH4 1651 aa18.33■□□□□ 0.52
CCDC33-205ENST00000558659 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
CCDC33-205ENST00000558659 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
CCDC33-205ENST00000558659 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
CCDC33-205ENST00000558659 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
CCDC33-205ENST00000558659 TET3O43151 1660 aa18.3■□□□□ 0.52
CCDC33-205ENST00000558659 CAMSAP1Q5T5Y3 1602 aa18.29■□□□□ 0.52
CCDC33-205ENST00000558659 KDM4FA0A1W2PPD8 638 aa18.29■□□□□ 0.52
CCDC33-205ENST00000558659 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
CCDC33-205ENST00000558659 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
CCDC33-205ENST00000558659 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
CCDC33-205ENST00000558659 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
CCDC33-205ENST00000558659 PTPRTO14522 1441 aa18.24■□□□□ 0.51
CCDC33-205ENST00000558659 ARHGAP31Q2M1Z3 1444 aa18.24■□□□□ 0.51
CCDC33-205ENST00000558659 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
CCDC33-205ENST00000558659 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
CCDC33-205ENST00000558659 IDI1Q13907 227 aa18.22■□□□□ 0.51
CCDC33-205ENST00000558659 NOS1P29475 1434 aa18.22■□□□□ 0.51
CCDC33-205ENST00000558659 RGL3Q3MIN7 710 aa18.22■□□□□ 0.51
CCDC33-205ENST00000558659 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
CCDC33-205ENST00000558659 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
CCDC33-205ENST00000558659 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
CCDC33-205ENST00000558659 SYNMO15061 1565 aa18.2■□□□□ 0.5
CCDC33-205ENST00000558659 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
CCDC33-205ENST00000558659 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
CCDC33-205ENST00000558659 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
CCDC33-205ENST00000558659 C3P01024 1663 aa18.19■□□□□ 0.5
CCDC33-205ENST00000558659 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
CCDC33-205ENST00000558659 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
CCDC33-205ENST00000558659 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
CCDC33-205ENST00000558659 TRPM2O94759 1503 aa18.17■□□□□ 0.5
CCDC33-205ENST00000558659 PTPRMP28827 1452 aa18.17■□□□□ 0.5
CCDC33-205ENST00000558659 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
CCDC33-205ENST00000558659 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.5
CCDC33-205ENST00000558659 TNRQ92752 1358 aa18.14■□□□□ 0.49
CCDC33-205ENST00000558659 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
CCDC33-205ENST00000558659 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
CCDC33-205ENST00000558659 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
CCDC33-205ENST00000558659 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
CCDC33-205ENST00000558659 SLC52A1Q9NWF4 448 aa18.11■□□□□ 0.49
CCDC33-205ENST00000558659 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
CCDC33-205ENST00000558659 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
CCDC33-205ENST00000558659 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
CCDC33-205ENST00000558659 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
CCDC33-205ENST00000558659 PIK3C2BO00750 1634 aa18.08■□□□□ 0.49
CCDC33-205ENST00000558659 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
CCDC33-205ENST00000558659 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
CCDC33-205ENST00000558659 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
CCDC33-205ENST00000558659 MYO5BQ9ULV0 1848 aa18.03■□□□□ 0.48
CCDC33-205ENST00000558659 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
CCDC33-205ENST00000558659 ADGRB3O60242 1522 aa18.02■□□□□ 0.48
CCDC33-205ENST00000558659 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
CCDC33-205ENST00000558659 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
CCDC33-205ENST00000558659 KIF1BO60333 1816 aa18■□□□□ 0.47
CCDC33-205ENST00000558659 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
CCDC33-205ENST00000558659 LTKP29376 864 aa17.99■□□□□ 0.47
CCDC33-205ENST00000558659 HSPA2P54652 639 aa17.99■□□□□ 0.47
CCDC33-205ENST00000558659 NLRP1Q9C000 1473 aa17.99■□□□□ 0.47
CCDC33-205ENST00000558659 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
CCDC33-205ENST00000558659 SETD1BQ9UPS6 1966 aaKnown RBP17.98■□□□□ 0.47
CCDC33-205ENST00000558659 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
CCDC33-205ENST00000558659 UBR1Q8IWV7 1749 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms