RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
RIPK3-205ENST00000557253 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
RIPK3-205ENST00000557253 CPS1P31327 1500 aa15.67■□□□□ 0.1
RIPK3-205ENST00000557253 TNRQ92752 1358 aa15.66■□□□□ 0.1
RIPK3-205ENST00000557253 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
RIPK3-205ENST00000557253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
RIPK3-205ENST00000557253 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
RIPK3-205ENST00000557253 DHX29Q7Z478 1369 aaKnown RBP15.64■□□□□ 0.09
RIPK3-205ENST00000557253 KIF3BO15066 747 aa15.64■□□□□ 0.09
RIPK3-205ENST00000557253 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
RIPK3-205ENST00000557253 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
RIPK3-205ENST00000557253 ANKLE2Q86XL3 938 aa15.63■□□□□ 0.09
RIPK3-205ENST00000557253 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
RIPK3-205ENST00000557253 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
RIPK3-205ENST00000557253 PZPP20742 1482 aa15.61■□□□□ 0.09
RIPK3-205ENST00000557253 WASHC2CQ9Y4E1 1318 aa15.61■□□□□ 0.09
RIPK3-205ENST00000557253 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
RIPK3-205ENST00000557253 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
RIPK3-205ENST00000557253 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
RIPK3-205ENST00000557253 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
RIPK3-205ENST00000557253 UGGT1Q9NYU2 1555 aa15.58■□□□□ 0.09
RIPK3-205ENST00000557253 MIA2Q96PC5 1412 aa15.58■□□□□ 0.08
RIPK3-205ENST00000557253 STRCP1A6NGW2 1772 aa15.57■□□□□ 0.08
RIPK3-205ENST00000557253 EHBP1L1Q8N3D4 1523 aa15.56■□□□□ 0.08
RIPK3-205ENST00000557253 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
RIPK3-205ENST00000557253 IQGAP1P46940 1657 aa15.56■□□□□ 0.08
RIPK3-205ENST00000557253 DEPDC5O75140 1603 aa15.55■□□□□ 0.08
RIPK3-205ENST00000557253 MED14O60244 1454 aa15.55■□□□□ 0.08
RIPK3-205ENST00000557253 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
RIPK3-205ENST00000557253 NLRP1Q9C000 1473 aa15.54■□□□□ 0.08
RIPK3-205ENST00000557253 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
RIPK3-205ENST00000557253 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
RIPK3-205ENST00000557253 CEP162Q5TB80 1403 aa15.52■□□□□ 0.08
RIPK3-205ENST00000557253 RNF17Q9BXT8 1623 aaKnown RBP15.5■□□□□ 0.07
RIPK3-205ENST00000557253 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
RIPK3-205ENST00000557253 TSPY4P0CV99 314 aa15.48■□□□□ 0.07
RIPK3-205ENST00000557253 TSPY10P0CW01 314 aa15.48■□□□□ 0.07
RIPK3-205ENST00000557253 RSPH4AQ5TD94 716 aa15.48■□□□□ 0.07
RIPK3-205ENST00000557253 RGS17Q9UGC6 210 aaPredicted RBP15.48■□□□□ 0.07
RIPK3-205ENST00000557253 SYNMO15061 1565 aa15.48■□□□□ 0.07
RIPK3-205ENST00000557253 ABCC3O15438 1527 aa15.47■□□□□ 0.07
RIPK3-205ENST00000557253 ZC3H13Q5T200 1668 aaKnown RBP15.46■□□□□ 0.07
RIPK3-205ENST00000557253 ARHGEF5Q12774 1597 aa15.45■□□□□ 0.06
RIPK3-205ENST00000557253 ERVK-7P63135 1459 aa15.45■□□□□ 0.06
RIPK3-205ENST00000557253 UBR1Q8IWV7 1749 aa15.44■□□□□ 0.06
RIPK3-205ENST00000557253 CEP152O94986 1710 aa15.43■□□□□ 0.06
RIPK3-205ENST00000557253 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
RIPK3-205ENST00000557253 LTKP29376 864 aa15.43■□□□□ 0.06
RIPK3-205ENST00000557253 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
RIPK3-205ENST00000557253 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
RIPK3-205ENST00000557253 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
RIPK3-205ENST00000557253 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
RIPK3-205ENST00000557253 EIF2AK4Q9P2K8 1649 aaKnown RBP15.39■□□□□ 0.05
RIPK3-205ENST00000557253 POTEAQ6S8J7 498 aa15.38■□□□□ 0.05
RIPK3-205ENST00000557253 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
RIPK3-205ENST00000557253 ARHGAP23Q9P227 1491 aa15.37■□□□□ 0.05
RIPK3-205ENST00000557253 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
RIPK3-205ENST00000557253 SLIT1O75093 1534 aa15.36■□□□□ 0.05
RIPK3-205ENST00000557253 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
RIPK3-205ENST00000557253 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
RIPK3-205ENST00000557253 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
RIPK3-205ENST00000557253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.04
RIPK3-205ENST00000557253 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
RIPK3-205ENST00000557253 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.04
RIPK3-205ENST00000557253 ROBO1Q9Y6N7 1651 aa15.32■□□□□ 0.04
RIPK3-205ENST00000557253 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
RIPK3-205ENST00000557253 DUOX2Q9NRD8 1548 aa15.32■□□□□ 0.04
RIPK3-205ENST00000557253 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
RIPK3-205ENST00000557253 PROSER2Q86WR7 435 aaPredicted RBP15.3■□□□□ 0.04
RIPK3-205ENST00000557253 SLC26A8Q96RN1 970 aa15.3■□□□□ 0.04
RIPK3-205ENST00000557253 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
RIPK3-205ENST00000557253 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
RIPK3-205ENST00000557253 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
RIPK3-205ENST00000557253 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
RIPK3-205ENST00000557253 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
RIPK3-205ENST00000557253 KCNA6P17658 529 aa15.28■□□□□ 0.04
RIPK3-205ENST00000557253 MAP3K1Q13233 1512 aa15.27■□□□□ 0.04
RIPK3-205ENST00000557253 KIF15Q9NS87 1388 aa15.27■□□□□ 0.04
RIPK3-205ENST00000557253 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
RIPK3-205ENST00000557253 IDI1Q13907 227 aa15.26■□□□□ 0.03
RIPK3-205ENST00000557253 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
RIPK3-205ENST00000557253 BCANQ96GW7 911 aa15.25■□□□□ 0.03
RIPK3-205ENST00000557253 TET3O43151 1660 aa15.25■□□□□ 0.03
RIPK3-205ENST00000557253 PHLPP1O60346 1717 aa15.24■□□□□ 0.03
RIPK3-205ENST00000557253 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
RIPK3-205ENST00000557253 ABCC5O15440 1437 aa15.23■□□□□ 0.03
RIPK3-205ENST00000557253 KANK1Q14678 1352 aa15.23■□□□□ 0.03
RIPK3-205ENST00000557253 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
RIPK3-205ENST00000557253 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
RIPK3-205ENST00000557253 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
RIPK3-205ENST00000557253 KDM5AP29375 1690 aaKnown RBP15.21■□□□□ 0.03
RIPK3-205ENST00000557253 MSH6P52701 1360 aa15.21■□□□□ 0.02
RIPK3-205ENST00000557253 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
RIPK3-205ENST00000557253 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
RIPK3-205ENST00000557253 JCADQ9P266 1359 aa15.2■□□□□ 0.02
RIPK3-205ENST00000557253 NKTRP30414 1462 aaKnown RBP15.19■□□□□ 0.02
RIPK3-205ENST00000557253 ADGRB3O60242 1522 aa15.18■□□□□ 0.02
RIPK3-205ENST00000557253 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
RIPK3-205ENST00000557253 DAPK1P53355 1430 aa15.17■□□□□ 0.02
RIPK3-205ENST00000557253 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms