RNA–Protein interactions for RNA: ENST00000556616.5

PRMT5-223, Transcript of protein arginine methyltransferase 5, human

TSL 4

Gene PRMT5, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT5-223	ENST00000556616	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.16	□□□□□ -0.62
PRMT5-223	ENST00000556616	BRPF1	P55201	1214 aa	Predicted RBP	11.16	□□□□□ -0.62
PRMT5-223	ENST00000556616	PHF8	Q9UPP1	1060 aa		11.16	□□□□□ -0.62
PRMT5-223	ENST00000556616	NCOA2	Q15596	1464 aa		11.15	□□□□□ -0.62
PRMT5-223	ENST00000556616	KIF12	Q96FN5	646 aa		11.15	□□□□□ -0.62
PRMT5-223	ENST00000556616	CABP2	Q9NPB3	220 aa		11.15	□□□□□ -0.62
PRMT5-223	ENST00000556616	PRG4	Q92954	1404 aa	Predicted RBP	11.15	□□□□□ -0.62
PRMT5-223	ENST00000556616	CDK13	Q14004	1512 aa	Known RBP	11.14	□□□□□ -0.63
PRMT5-223	ENST00000556616	MAP3K13	O43283	966 aa		11.14	□□□□□ -0.63
PRMT5-223	ENST00000556616	MTUS2	Q5JR59	1369 aa		11.14	□□□□□ -0.63
PRMT5-223	ENST00000556616	PLB1	Q6P1J6	1458 aa		11.13	□□□□□ -0.63
PRMT5-223	ENST00000556616	FGD6	Q6ZV73	1430 aa		11.13	□□□□□ -0.63
PRMT5-223	ENST00000556616	SEMA3E	O15041	775 aa		11.13	□□□□□ -0.63
PRMT5-223	ENST00000556616	FXR2	P51116	673 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
PRMT5-223	ENST00000556616	MYOM3	Q5VTT5	1437 aa		11.12	□□□□□ -0.63
PRMT5-223	ENST00000556616	PAK3	O75914	559 aa	Predicted RBP	11.12	□□□□□ -0.63
PRMT5-223	ENST00000556616	ZEB1	P37275	1124 aa	Predicted RBP	11.12	□□□□□ -0.63
PRMT5-223	ENST00000556616	ADCY10	Q96PN6	1610 aa		11.11	□□□□□ -0.63
PRMT5-223	ENST00000556616	TCOF1	Q13428	1488 aa	Known RBP	11.11	□□□□□ -0.63
PRMT5-223	ENST00000556616	NCKAP5L	Q9HCH0	1330 aa		11.1	□□□□□ -0.63
PRMT5-223	ENST00000556616	ERCC6L2	Q5T890	1561 aa		11.09	□□□□□ -0.63
PRMT5-223	ENST00000556616	PDE4A	P27815	886 aa		11.09	□□□□□ -0.63
PRMT5-223	ENST00000556616	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.09	□□□□□ -0.63
PRMT5-223	ENST00000556616	TRO	Q12816	1431 aa	Predicted RBP	11.09	□□□□□ -0.63
PRMT5-223	ENST00000556616	MIA2	Q96PC5	1412 aa		11.09	□□□□□ -0.63
PRMT5-223	ENST00000556616	ATP10B	O94823	1461 aa		11.08	□□□□□ -0.64
PRMT5-223	ENST00000556616	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.08	□□□□□ -0.64
PRMT5-223	ENST00000556616	PTPRG	P23470	1445 aa		11.08	□□□□□ -0.64
PRMT5-223	ENST00000556616	MFSD10	Q14728	455 aa		11.07	□□□□□ -0.64
PRMT5-223	ENST00000556616	SLC24A3	Q9HC58	644 aa		11.07	□□□□□ -0.64
PRMT5-223	ENST00000556616	UHRF1BP1L	A0JNW5	1464 aa		11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	C14orf37	Q86TY3	774 aa		11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	ARX	Q96QS3	562 aa		11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	LARP6	Q9BRS8	491 aa	Known RBP	11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	UACA	Q9BZF9	1416 aa		11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	PTPN23	Q9H3S7	1636 aa		11.06	□□□□□ -0.64
PRMT5-223	ENST00000556616	ABCC2	Q92887	1545 aa		11.05	□□□□□ -0.64
PRMT5-223	ENST00000556616	SMYD5	Q6GMV2	418 aa		11.05	□□□□□ -0.64
PRMT5-223	ENST00000556616	MS4A4A	Q96JQ5	239 aa		11.05	□□□□□ -0.64
PRMT5-223	ENST00000556616	ZMYND10	O75800	440 aa		11.04	□□□□□ -0.64
PRMT5-223	ENST00000556616	CRISPLD2	Q9H0B8	497 aa		11.04	□□□□□ -0.64
PRMT5-223	ENST00000556616	NEUROD2	Q15784	382 aa		11.03	□□□□□ -0.64
PRMT5-223	ENST00000556616	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.03	□□□□□ -0.64
PRMT5-223	ENST00000556616	ABCC10	Q5T3U5	1492 aa		11.03	□□□□□ -0.64
PRMT5-223	ENST00000556616	CLSPN	Q9HAW4	1339 aa		11.02	□□□□□ -0.65
PRMT5-223	ENST00000556616	AKNA	Q7Z591	1439 aa		11.01	□□□□□ -0.65
PRMT5-223	ENST00000556616	KIF14	Q15058	1648 aa		11.01	□□□□□ -0.65
PRMT5-223	ENST00000556616	ITSN2	Q9NZM3	1697 aa		11.01	□□□□□ -0.65
PRMT5-223	ENST00000556616	PTPRK	Q15262	1439 aa		11.01	□□□□□ -0.65
PRMT5-223	ENST00000556616	KDM5B	Q9UGL1	1544 aa		11	□□□□□ -0.65
PRMT5-223	ENST00000556616	CAMK2B	Q13554	666 aa		11	□□□□□ -0.65
PRMT5-223	ENST00000556616	CCER1	Q8TC90	406 aa	Predicted RBP	11	□□□□□ -0.65
PRMT5-223	ENST00000556616	SETD5	Q9C0A6	1442 aa		11	□□□□□ -0.65
PRMT5-223	ENST00000556616	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.99	□□□□□ -0.65
PRMT5-223	ENST00000556616	DDX27	Q96GQ7	796 aa	Known RBP	10.99	□□□□□ -0.65
PRMT5-223	ENST00000556616	DHX57	Q6P158	1386 aa	Known RBP	10.99	□□□□□ -0.65
PRMT5-223	ENST00000556616	HFM1	A2PYH4	1435 aa		10.99	□□□□□ -0.65
PRMT5-223	ENST00000556616	BARGIN	Q6ZT62	677 aa		10.97	□□□□□ -0.65
PRMT5-223	ENST00000556616	RAB3GAP2	Q9H2M9	1393 aa		10.97	□□□□□ -0.65
PRMT5-223	ENST00000556616	DNMT1	P26358	1616 aa	Known RBP	10.97	□□□□□ -0.65
PRMT5-223	ENST00000556616	FAM50A	Q14320	339 aa	Known RBP	10.96	□□□□□ -0.65
PRMT5-223	ENST00000556616	PIP4P2	Q8N4L2	257 aa		10.95	□□□□□ -0.66
PRMT5-223	ENST00000556616	ZRANB1	Q9UGI0	708 aa		10.95	□□□□□ -0.66
PRMT5-223	ENST00000556616	CDC42BPA	Q5VT25	1732 aa		10.95	□□□□□ -0.66
PRMT5-223	ENST00000556616	GCC2	Q8IWJ2	1684 aa		10.95	□□□□□ -0.66
PRMT5-223	ENST00000556616	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.95	□□□□□ -0.66
PRMT5-223	ENST00000556616	NAIP	Q13075	1403 aa		10.94	□□□□□ -0.66
PRMT5-223	ENST00000556616	PLEKHD1	A6NEE1	506 aa		10.94	□□□□□ -0.66
PRMT5-223	ENST00000556616	ARID3C	A6NKF2	412 aa		10.94	□□□□□ -0.66
PRMT5-223	ENST00000556616	DAPK1	P53355	1430 aa		10.93	□□□□□ -0.66
PRMT5-223	ENST00000556616	ROCK1	Q13464	1354 aa		10.93	□□□□□ -0.66
PRMT5-223	ENST00000556616	PREX2	Q70Z35	1606 aa		10.93	□□□□□ -0.66
PRMT5-223	ENST00000556616	CAMSAP2	Q08AD1	1489 aa		10.93	□□□□□ -0.66
PRMT5-223	ENST00000556616	ABCC5	O15440	1437 aa		10.92	□□□□□ -0.66
PRMT5-223	ENST00000556616	MAPKBP1	O60336	1514 aa		10.92	□□□□□ -0.66
PRMT5-223	ENST00000556616	ADGRL2	O95490	1459 aa		10.92	□□□□□ -0.66
PRMT5-223	ENST00000556616	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
PRMT5-223	ENST00000556616	GOLGA2	Q08379	1002 aa		10.91	□□□□□ -0.66
PRMT5-223	ENST00000556616	PHF12	Q96QT6	1004 aa		10.91	□□□□□ -0.66
PRMT5-223	ENST00000556616	TMEM106C	Q9BVX2	250 aa		10.91	□□□□□ -0.66
PRMT5-223	ENST00000556616	CROCC2	H7BZ55	1655 aa		10.91	□□□□□ -0.66
PRMT5-223	ENST00000556616	ARHGEF5	Q12774	1597 aa		10.9	□□□□□ -0.66
PRMT5-223	ENST00000556616	SHANK2	Q9UPX8	1470 aa		10.9	□□□□□ -0.66
PRMT5-223	ENST00000556616	ITGAE	P38570	1179 aa		10.9	□□□□□ -0.66
PRMT5-223	ENST00000556616	ARAP3	Q8WWN8	1544 aa		10.89	□□□□□ -0.67
PRMT5-223	ENST00000556616	CHRDL2	Q6WN34	429 aa		10.89	□□□□□ -0.67
PRMT5-223	ENST00000556616	TTC37	Q6PGP7	1564 aa		10.89	□□□□□ -0.67
PRMT5-223	ENST00000556616	CD44	P16070	742 aa	Known RBP	10.88	□□□□□ -0.67
PRMT5-223	ENST00000556616	AK7	Q96M32	723 aa		10.88	□□□□□ -0.67
PRMT5-223	ENST00000556616	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.88	□□□□□ -0.67
PRMT5-223	ENST00000556616	CDC42BPB	Q9Y5S2	1711 aa		10.88	□□□□□ -0.67
PRMT5-223	ENST00000556616	MBD5	Q9P267	1494 aa		10.87	□□□□□ -0.67
PRMT5-223	ENST00000556616	SAMD9L	Q8IVG5	1584 aa		10.87	□□□□□ -0.67
PRMT5-223	ENST00000556616	MLLT3	P42568	568 aa	Predicted RBP	10.87	□□□□□ -0.67
PRMT5-223	ENST00000556616	MKRN3	Q13064	507 aa	Known RBP	10.87	□□□□□ -0.67
PRMT5-223	ENST00000556616	ADGB	Q8N7X0	1667 aa		10.87	□□□□□ -0.67
PRMT5-223	ENST00000556616	ZNF644	Q9H582	1327 aa	Predicted RBP	10.86	□□□□□ -0.67
PRMT5-223	ENST00000556616	ACIN1	Q9UKV3	1341 aa	Known RBP	10.86	□□□□□ -0.67
PRMT5-223	ENST00000556616	RBM26	Q5T8P6	1007 aa	Known RBP	10.86	□□□□□ -0.67
PRMT5-223	ENST00000556616	ILDR1	Q86SU0	546 aa	Predicted RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms