RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 PLXNC1O60486 1568 aa13.8□□□□□ -0.2
HNRNPC-212ENST00000554539 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-212ENST00000554539 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
HNRNPC-212ENST00000554539 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
HNRNPC-212ENST00000554539 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-212ENST00000554539 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-212ENST00000554539 PLEKHH2Q8IVE3 1493 aa13.78□□□□□ -0.2
HNRNPC-212ENST00000554539 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-212ENST00000554539 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
HNRNPC-212ENST00000554539 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
HNRNPC-212ENST00000554539 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-212ENST00000554539 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
HNRNPC-212ENST00000554539 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
HNRNPC-212ENST00000554539 CPS1P31327 1500 aa13.73□□□□□ -0.21
HNRNPC-212ENST00000554539 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
HNRNPC-212ENST00000554539 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
HNRNPC-212ENST00000554539 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-212ENST00000554539 PZPP20742 1482 aa13.71□□□□□ -0.21
HNRNPC-212ENST00000554539 ALKQ9UM73 1620 aa13.71□□□□□ -0.22
HNRNPC-212ENST00000554539 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
HNRNPC-212ENST00000554539 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-212ENST00000554539 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
HNRNPC-212ENST00000554539 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
HNRNPC-212ENST00000554539 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
HNRNPC-212ENST00000554539 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
HNRNPC-212ENST00000554539 FAM135AQ9P2D6 1515 aa13.68□□□□□ -0.22
HNRNPC-212ENST00000554539 LTKP29376 864 aa13.67□□□□□ -0.22
HNRNPC-212ENST00000554539 LRRC7Q96NW7 1537 aa13.67□□□□□ -0.22
HNRNPC-212ENST00000554539 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
HNRNPC-212ENST00000554539 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
HNRNPC-212ENST00000554539 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
HNRNPC-212ENST00000554539 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
HNRNPC-212ENST00000554539 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
HNRNPC-212ENST00000554539 NCOA2Q15596 1464 aa13.65□□□□□ -0.22
HNRNPC-212ENST00000554539 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
HNRNPC-212ENST00000554539 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
HNRNPC-212ENST00000554539 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-212ENST00000554539 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
HNRNPC-212ENST00000554539 MED14O60244 1454 aa13.63□□□□□ -0.23
HNRNPC-212ENST00000554539 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
HNRNPC-212ENST00000554539 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
HNRNPC-212ENST00000554539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.232e-26■■□□□ 11.8
HNRNPC-212ENST00000554539 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
HNRNPC-212ENST00000554539 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-212ENST00000554539 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
HNRNPC-212ENST00000554539 ABCC3O15438 1527 aa13.59□□□□□ -0.23
HNRNPC-212ENST00000554539 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
HNRNPC-212ENST00000554539 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
HNRNPC-212ENST00000554539 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
HNRNPC-212ENST00000554539 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
HNRNPC-212ENST00000554539 PROSER2Q86WR7 435 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-212ENST00000554539 EID1Q9Y6B2 187 aa13.56□□□□□ -0.24
HNRNPC-212ENST00000554539 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-212ENST00000554539 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
HNRNPC-212ENST00000554539 BCANQ96GW7 911 aa13.55□□□□□ -0.24
HNRNPC-212ENST00000554539 RNF17Q9BXT8 1623 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-212ENST00000554539 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
HNRNPC-212ENST00000554539 CEP152O94986 1710 aa13.53□□□□□ -0.24
HNRNPC-212ENST00000554539 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
HNRNPC-212ENST00000554539 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-212ENST00000554539 IDI1Q13907 227 aa13.52□□□□□ -0.25
HNRNPC-212ENST00000554539 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
HNRNPC-212ENST00000554539 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.25
HNRNPC-212ENST00000554539 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-212ENST00000554539 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
HNRNPC-212ENST00000554539 KCNA6P17658 529 aa13.5□□□□□ -0.25
HNRNPC-212ENST00000554539 SYNMO15061 1565 aa13.49□□□□□ -0.25
HNRNPC-212ENST00000554539 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
HNRNPC-212ENST00000554539 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
HNRNPC-212ENST00000554539 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
HNRNPC-212ENST00000554539 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
HNRNPC-212ENST00000554539 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
HNRNPC-212ENST00000554539 KIF15Q9NS87 1388 aa13.46□□□□□ -0.25
HNRNPC-212ENST00000554539 SLIT1O75093 1534 aa13.46□□□□□ -0.25
HNRNPC-212ENST00000554539 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
HNRNPC-212ENST00000554539 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
HNRNPC-212ENST00000554539 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
HNRNPC-212ENST00000554539 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
HNRNPC-212ENST00000554539 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-212ENST00000554539 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
HNRNPC-212ENST00000554539 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
HNRNPC-212ENST00000554539 ABCC5O15440 1437 aa13.44□□□□□ -0.26
HNRNPC-212ENST00000554539 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
HNRNPC-212ENST00000554539 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-212ENST00000554539 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-212ENST00000554539 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-212ENST00000554539 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
HNRNPC-212ENST00000554539 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
HNRNPC-212ENST00000554539 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
HNRNPC-212ENST00000554539 MSH6P52701 1360 aa13.41□□□□□ -0.26
HNRNPC-212ENST00000554539 KANK1Q14678 1352 aa13.41□□□□□ -0.26
HNRNPC-212ENST00000554539 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 EFCAB6Q5THR3 1501 aa13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 NUTM2BA6NNL0 878 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 NUTM2EB1AL46 878 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-212ENST00000554539 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
HNRNPC-212ENST00000554539 TET3O43151 1660 aa13.38□□□□□ -0.27
HNRNPC-212ENST00000554539 JCADQ9P266 1359 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms