RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
CHD8-204ENST00000553622 RNF17Q9BXT8 1623 aaKnown RBP14.43□□□□□ -0.1
CHD8-204ENST00000553622 CFAP65Q6ZU64 1925 aaKnown RBP14.43□□□□□ -0.1
CHD8-204ENST00000553622 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
CHD8-204ENST00000553622 HRCP23327 699 aa14.42□□□□□ -0.1
CHD8-204ENST00000553622 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
CHD8-204ENST00000553622 NUP155O75694 1391 aa14.42□□□□□ -0.1
CHD8-204ENST00000553622 IQGAP3Q86VI3 1631 aa14.41□□□□□ -0.1
CHD8-204ENST00000553622 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
CHD8-204ENST00000553622 GGT6Q6P531 493 aa14.4□□□□□ -0.1
CHD8-204ENST00000553622 KANK1Q14678 1352 aa14.39□□□□□ -0.11
CHD8-204ENST00000553622 MLECQ14165 292 aa14.39□□□□□ -0.11
CHD8-204ENST00000553622 MROH1Q8NDA8 1641 aa14.39□□□□□ -0.11
CHD8-204ENST00000553622 AGLP35573 1532 aa14.38□□□□□ -0.11
CHD8-204ENST00000553622 PRDM15P57071 1507 aaPredicted RBP14.38□□□□□ -0.11
CHD8-204ENST00000553622 FAM135AQ9P2D6 1515 aa14.38□□□□□ -0.11
CHD8-204ENST00000553622 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
CHD8-204ENST00000553622 DHX57Q6P158 1386 aaKnown RBP14.37□□□□□ -0.11
CHD8-204ENST00000553622 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
CHD8-204ENST00000553622 PZPP20742 1482 aa14.37□□□□□ -0.11
CHD8-204ENST00000553622 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
CHD8-204ENST00000553622 TET3O43151 1660 aa14.36□□□□□ -0.11
CHD8-204ENST00000553622 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
CHD8-204ENST00000553622 ZC3H13Q5T200 1668 aaKnown RBP14.35□□□□□ -0.11
CHD8-204ENST00000553622 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
CHD8-204ENST00000553622 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.11
CHD8-204ENST00000553622 E9PCH4 1651 aa14.33□□□□□ -0.11
CHD8-204ENST00000553622 FOXD1Q16676 465 aa14.33□□□□□ -0.12
CHD8-204ENST00000553622 VWDEQ8N2E2 1590 aa14.33□□□□□ -0.12
CHD8-204ENST00000553622 WASHC2CQ9Y4E1 1318 aa14.33□□□□□ -0.12
CHD8-204ENST00000553622 PKD2Q13563 968 aa14.32□□□□□ -0.12
CHD8-204ENST00000553622 ESF1Q9H501 851 aaKnown RBP14.32□□□□□ -0.12
CHD8-204ENST00000553622 ABCC3O15438 1527 aa14.31□□□□□ -0.12
CHD8-204ENST00000553622 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
CHD8-204ENST00000553622 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
CHD8-204ENST00000553622 RIMS1Q86UR5 1692 aaKnown RBP14.27□□□□□ -0.12
CHD8-204ENST00000553622 LMTK2Q8IWU2 1503 aa14.27□□□□□ -0.12
CHD8-204ENST00000553622 MADDQ8WXG6 1647 aa14.26□□□□□ -0.13
CHD8-204ENST00000553622 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
CHD8-204ENST00000553622 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
CHD8-204ENST00000553622 PREX1Q8TCU6 1659 aa14.24□□□□□ -0.13
CHD8-204ENST00000553622 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
CHD8-204ENST00000553622 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
CHD8-204ENST00000553622 C3P01024 1663 aa14.23□□□□□ -0.13
CHD8-204ENST00000553622 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
CHD8-204ENST00000553622 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
CHD8-204ENST00000553622 NPATQ14207 1427 aa14.22□□□□□ -0.13
CHD8-204ENST00000553622 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
CHD8-204ENST00000553622 KIF1BO60333 1816 aa14.22□□□□□ -0.13
CHD8-204ENST00000553622 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
CHD8-204ENST00000553622 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.13
CHD8-204ENST00000553622 ANKRD30BQ9BXX2 1392 aa14.21□□□□□ -0.14
CHD8-204ENST00000553622 TRPM2O94759 1503 aa14.19□□□□□ -0.14
CHD8-204ENST00000553622 ZMYM3Q14202 1370 aa14.19□□□□□ -0.14
CHD8-204ENST00000553622 CLTCL1P53675 1640 aa14.19□□□□□ -0.14
CHD8-204ENST00000553622 CCDC144AA2RUR9 1427 aa14.18□□□□□ -0.14
CHD8-204ENST00000553622 ARHGAP31Q2M1Z3 1444 aa14.18□□□□□ -0.14
CHD8-204ENST00000553622 MYO5BQ9ULV0 1848 aa14.17□□□□□ -0.14
CHD8-204ENST00000553622 SYNMO15061 1565 aa14.17□□□□□ -0.14
CHD8-204ENST00000553622 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
CHD8-204ENST00000553622 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
CHD8-204ENST00000553622 ERVK-7P63135 1459 aa14.16□□□□□ -0.14
CHD8-204ENST00000553622 PLA2R1Q13018 1463 aa14.16□□□□□ -0.14
CHD8-204ENST00000553622 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
CHD8-204ENST00000553622 PTPRTO14522 1441 aa14.15□□□□□ -0.14
CHD8-204ENST00000553622 TONSLQ96HA7 1378 aa14.14□□□□□ -0.15
CHD8-204ENST00000553622 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
CHD8-204ENST00000553622 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
CHD8-204ENST00000553622 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
CHD8-204ENST00000553622 NOS1P29475 1434 aa14.13□□□□□ -0.15
CHD8-204ENST00000553622 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
CHD8-204ENST00000553622 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
CHD8-204ENST00000553622 TNRQ92752 1358 aa14.1□□□□□ -0.15
CHD8-204ENST00000553622 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
CHD8-204ENST00000553622 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
CHD8-204ENST00000553622 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.15
CHD8-204ENST00000553622 PTPRMP28827 1452 aa14.08□□□□□ -0.16
CHD8-204ENST00000553622 IDI1Q13907 227 aa14.07□□□□□ -0.16
CHD8-204ENST00000553622 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
CHD8-204ENST00000553622 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
CHD8-204ENST00000553622 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
CHD8-204ENST00000553622 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
CHD8-204ENST00000553622 UBR1Q8IWV7 1749 aa14.05□□□□□ -0.16
CHD8-204ENST00000553622 PPLO60437 1756 aa14.05□□□□□ -0.16
CHD8-204ENST00000553622 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
CHD8-204ENST00000553622 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
CHD8-204ENST00000553622 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
CHD8-204ENST00000553622 KDM2AQ9Y2K7 1162 aa14.04□□□□□ -0.16
CHD8-204ENST00000553622 SPATA31E1Q6ZUB1 1445 aa14.04□□□□□ -0.16
CHD8-204ENST00000553622 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
CHD8-204ENST00000553622 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
CHD8-204ENST00000553622 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
CHD8-204ENST00000553622 KDM5AP29375 1690 aaKnown RBP14.01□□□□□ -0.17
CHD8-204ENST00000553622 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
CHD8-204ENST00000553622 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
CHD8-204ENST00000553622 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
CHD8-204ENST00000553622 A2ML1A8K2U0 1454 aa13.99□□□□□ -0.17
CHD8-204ENST00000553622 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
CHD8-204ENST00000553622 NEXMIFQ5QGS0 1516 aa13.97□□□□□ -0.17
CHD8-204ENST00000553622 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms