RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ATP7AQ04656 1500 aa11.2□□□□□ -0.62
LETMD1-236ENST00000553043 EEA1Q15075 1411 aa11.2□□□□□ -0.62
LETMD1-236ENST00000553043 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
LETMD1-236ENST00000553043 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
LETMD1-236ENST00000553043 FAM135AQ9P2D6 1515 aa11.19□□□□□ -0.62
LETMD1-236ENST00000553043 FAM135BQ49AJ0 1406 aa11.19□□□□□ -0.62
LETMD1-236ENST00000553043 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
LETMD1-236ENST00000553043 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
LETMD1-236ENST00000553043 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
LETMD1-236ENST00000553043 UGGT1Q9NYU2 1555 aa11.18□□□□□ -0.62
LETMD1-236ENST00000553043 KIF3BO15066 747 aa11.17□□□□□ -0.62
LETMD1-236ENST00000553043 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
LETMD1-236ENST00000553043 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-236ENST00000553043 PZPP20742 1482 aa11.16□□□□□ -0.62
LETMD1-236ENST00000553043 ARHGAP35Q9NRY4 1499 aa11.16□□□□□ -0.62
LETMD1-236ENST00000553043 SYNMO15061 1565 aa11.16□□□□□ -0.62
LETMD1-236ENST00000553043 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
LETMD1-236ENST00000553043 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
LETMD1-236ENST00000553043 DEPDC5O75140 1603 aa11.15□□□□□ -0.62
LETMD1-236ENST00000553043 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
LETMD1-236ENST00000553043 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-236ENST00000553043 KIAA1107Q9UPP5 1409 aa11.14□□□□□ -0.63
LETMD1-236ENST00000553043 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
LETMD1-236ENST00000553043 INO80Q9ULG1 1556 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-236ENST00000553043 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
LETMD1-236ENST00000553043 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
LETMD1-236ENST00000553043 RXRBP28702 533 aa11.12□□□□□ -0.63
LETMD1-236ENST00000553043 LTKP29376 864 aa11.12□□□□□ -0.63
LETMD1-236ENST00000553043 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
LETMD1-236ENST00000553043 TMEM94Q12767 1356 aa11.12□□□□□ -0.63
LETMD1-236ENST00000553043 JCADQ9P266 1359 aa11.12□□□□□ -0.63
LETMD1-236ENST00000553043 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
LETMD1-236ENST00000553043 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
LETMD1-236ENST00000553043 ZNF644Q9H582 1327 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-236ENST00000553043 KDM5DQ9BY66 1539 aa11.09□□□□□ -0.63
LETMD1-236ENST00000553043 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
LETMD1-236ENST00000553043 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
LETMD1-236ENST00000553043 CCDC18Q5T9S5 1454 aa11.08□□□□□ -0.64
LETMD1-236ENST00000553043 SCAF11Q99590 1463 aaKnown RBP11.08□□□□□ -0.64
LETMD1-236ENST00000553043 CCNB3Q8WWL7 1395 aa11.08□□□□□ -0.64
LETMD1-236ENST00000553043 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
LETMD1-236ENST00000553043 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
LETMD1-236ENST00000553043 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
LETMD1-236ENST00000553043 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
LETMD1-236ENST00000553043 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
LETMD1-236ENST00000553043 LRP6O75581 1613 aa11.06□□□□□ -0.64
LETMD1-236ENST00000553043 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
LETMD1-236ENST00000553043 RTEL1-TNFRSF6BF6WH68 1400 aa11.05□□□□□ -0.64
LETMD1-236ENST00000553043 KCNA6P17658 529 aa11.05□□□□□ -0.64
LETMD1-236ENST00000553043 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
LETMD1-236ENST00000553043 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
LETMD1-236ENST00000553043 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
LETMD1-236ENST00000553043 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
LETMD1-236ENST00000553043 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
LETMD1-236ENST00000553043 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
LETMD1-236ENST00000553043 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 LRRC9Q6ZRR7 1453 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 MBD5Q9P267 1494 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 SRCAPQ6ZRS2 3230 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 MSH6P52701 1360 aa11.03□□□□□ -0.64
LETMD1-236ENST00000553043 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
LETMD1-236ENST00000553043 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
LETMD1-236ENST00000553043 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
LETMD1-236ENST00000553043 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
LETMD1-236ENST00000553043 PHLPP1O60346 1717 aa11.01□□□□□ -0.65
LETMD1-236ENST00000553043 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
LETMD1-236ENST00000553043 FOXD1Q16676 465 aa11□□□□□ -0.65
LETMD1-236ENST00000553043 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
LETMD1-236ENST00000553043 ARHGAP23Q9P227 1491 aa11□□□□□ -0.65
LETMD1-236ENST00000553043 AFF2P51816 1311 aa10.99□□□□□ -0.65
LETMD1-236ENST00000553043 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
LETMD1-236ENST00000553043 BCANQ96GW7 911 aa10.98□□□□□ -0.65
LETMD1-236ENST00000553043 QTRT2Q9H974 415 aaKnown RBP10.98□□□□□ -0.65
LETMD1-236ENST00000553043 RGS12O14924 1447 aa10.98□□□□□ -0.65
LETMD1-236ENST00000553043 SLIT1O75093 1534 aa10.98□□□□□ -0.65
LETMD1-236ENST00000553043 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
LETMD1-236ENST00000553043 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
LETMD1-236ENST00000553043 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
LETMD1-236ENST00000553043 PRDM15P57071 1507 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-236ENST00000553043 COL16A1Q07092 1604 aaPredicted RBP10.96□□□□□ -0.65
LETMD1-236ENST00000553043 ABCC3O15438 1527 aa10.96□□□□□ -0.65
LETMD1-236ENST00000553043 UBR1Q8IWV7 1749 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 SETBP1Q9Y6X0 1596 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
LETMD1-236ENST00000553043 CCDC141Q6ZP82 1450 aa10.94□□□□□ -0.66
LETMD1-236ENST00000553043 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
LETMD1-236ENST00000553043 ATAD2Q6PL18 1390 aa10.93□□□□□ -0.66
LETMD1-236ENST00000553043 TIAM1Q13009 1591 aa10.92□□□□□ -0.66
LETMD1-236ENST00000553043 NKTRP30414 1462 aaKnown RBP10.92□□□□□ -0.66
LETMD1-236ENST00000553043 NGLY1Q96IV0 654 aa10.91□□□□□ -0.66
LETMD1-236ENST00000553043 ATF3P18847 181 aa10.9□□□□□ -0.66
LETMD1-236ENST00000553043 IDI1Q13907 227 aa10.9□□□□□ -0.66
LETMD1-236ENST00000553043 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
LETMD1-236ENST00000553043 BRINP3Q76B58 766 aa10.89□□□□□ -0.67
LETMD1-236ENST00000553043 TET3O43151 1660 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms