RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
NPAS3-210ENST00000551492 GCC2Q8IWJ2 1684 aa29.14■■■□□ 2.26
NPAS3-210ENST00000551492 RSPH4AQ5TD94 716 aa29.13■■■□□ 2.25
NPAS3-210ENST00000551492 GGT6Q6P531 493 aa29.13■■■□□ 2.25
NPAS3-210ENST00000551492 KIAA1107Q9UPP5 1409 aa29.11■■■□□ 2.25
NPAS3-210ENST00000551492 ZNF326Q5BKZ1 582 aaKnown RBP29.11■■■□□ 2.25
NPAS3-210ENST00000551492 SENP3Q9H4L4 574 aaPredicted RBP29.08■■■□□ 2.25
NPAS3-210ENST00000551492 ADGRL2O95490 1459 aa29.07■■■□□ 2.24
NPAS3-210ENST00000551492 ARHGEF5Q12774 1597 aa29.07■■■□□ 2.24
NPAS3-210ENST00000551492 ADGBQ8N7X0 1667 aa29.06■■■□□ 2.24
NPAS3-210ENST00000551492 PZPP20742 1482 aa29.05■■■□□ 2.24
NPAS3-210ENST00000551492 MLECQ14165 292 aa29.04■■■□□ 2.24
NPAS3-210ENST00000551492 RGL3Q3MIN7 710 aa29.04■■■□□ 2.24
NPAS3-210ENST00000551492 TONSLQ96HA7 1378 aa29.02■■■□□ 2.24
NPAS3-210ENST00000551492 KDM2AQ9Y2K7 1162 aa29.02■■■□□ 2.24
NPAS3-210ENST00000551492 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
NPAS3-210ENST00000551492 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
NPAS3-210ENST00000551492 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.23
NPAS3-210ENST00000551492 DIP2BQ9P265 1576 aa28.98■■■□□ 2.23
NPAS3-210ENST00000551492 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
NPAS3-210ENST00000551492 PLPPR3Q6T4P5 718 aa28.95■■■□□ 2.23
NPAS3-210ENST00000551492 COL17A1Q9UMD9 1497 aaPredicted RBP28.94■■■□□ 2.22
NPAS3-210ENST00000551492 ANKRD30BQ9BXX2 1392 aa28.93■■■□□ 2.22
NPAS3-210ENST00000551492 ZFYVE16Q7Z3T8 1539 aa28.93■■■□□ 2.22
NPAS3-210ENST00000551492 PPP1R15AO75807 674 aaPredicted RBP28.93■■■□□ 2.22
NPAS3-210ENST00000551492 CFAP65Q6ZU64 1925 aaKnown RBP28.92■■■□□ 2.22
NPAS3-210ENST00000551492 ATP7AQ04656 1500 aa28.92■■■□□ 2.22
NPAS3-210ENST00000551492 TIMELESSQ9UNS1 1208 aa28.92■■■□□ 2.22
NPAS3-210ENST00000551492 POGZQ7Z3K3 1410 aa28.9■■■□□ 2.22
NPAS3-210ENST00000551492 ZNF518AQ6AHZ1 1483 aa28.87■■■□□ 2.21
NPAS3-210ENST00000551492 MAP3K4Q9Y6R4 1608 aa28.86■■■□□ 2.21
NPAS3-210ENST00000551492 ARAP3Q8WWN8 1544 aa28.86■■■□□ 2.21
NPAS3-210ENST00000551492 NEFLP07196 543 aa28.85■■■□□ 2.21
NPAS3-210ENST00000551492 KIDINS220Q9ULH0 1771 aa28.85■■■□□ 2.21
NPAS3-210ENST00000551492 NBPF8Q3BBV2 869 aa28.84■■■□□ 2.21
NPAS3-210ENST00000551492 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
NPAS3-210ENST00000551492 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
NPAS3-210ENST00000551492 FAM135AQ9P2D6 1515 aa28.83■■■□□ 2.2
NPAS3-210ENST00000551492 DUOX2Q9NRD8 1548 aa28.82■■■□□ 2.2
NPAS3-210ENST00000551492 DHX29Q7Z478 1369 aaKnown RBP28.81■■■□□ 2.2
NPAS3-210ENST00000551492 DCAF11Q8TEB1 546 aa28.79■■■□□ 2.2
NPAS3-210ENST00000551492 ZMYND15Q9H091 742 aa28.79■■■□□ 2.2
NPAS3-210ENST00000551492 MAST1Q9Y2H9 1570 aa28.78■■■□□ 2.2
NPAS3-210ENST00000551492 CHGAP10645 457 aaKnown RBP28.78■■■□□ 2.2
NPAS3-210ENST00000551492 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
NPAS3-210ENST00000551492 WASHC2CQ9Y4E1 1318 aa28.76■■■□□ 2.19
NPAS3-210ENST00000551492 NEO1Q92859 1461 aa28.76■■■□□ 2.19
NPAS3-210ENST00000551492 RTEL1-TNFRSF6BF6WH68 1400 aa28.76■■■□□ 2.19
NPAS3-210ENST00000551492 ARID4BQ4LE39 1312 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-210ENST00000551492 INO80Q9ULG1 1556 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-210ENST00000551492 A2MP01023 1474 aa28.75■■■□□ 2.19
NPAS3-210ENST00000551492 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
NPAS3-210ENST00000551492 NUTM2DQ5VT03 806 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-210ENST00000551492 ERBINQ96RT1 1412 aa28.71■■■□□ 2.19
NPAS3-210ENST00000551492 NOP58Q9Y2X3 529 aaKnown RBP28.71■■■□□ 2.19
NPAS3-210ENST00000551492 ABCA6Q8N139 1617 aa28.7■■■□□ 2.19
NPAS3-210ENST00000551492 GLI2P10070 1586 aa28.7■■■□□ 2.19
NPAS3-210ENST00000551492 PLA2R1Q13018 1463 aa28.7■■■□□ 2.18
NPAS3-210ENST00000551492 VSIG10Q8N0Z9 540 aa28.68■■■□□ 2.18
NPAS3-210ENST00000551492 FBXO31Q5XUX0 539 aaPredicted RBP28.67■■■□□ 2.18
NPAS3-210ENST00000551492 HECW2Q9P2P5 1572 aa28.66■■■□□ 2.18
NPAS3-210ENST00000551492 FRMPD1Q5SYB0 1578 aa28.66■■■□□ 2.18
NPAS3-210ENST00000551492 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
NPAS3-210ENST00000551492 RTL5Q5HYW3 569 aaPredicted RBP28.65■■■□□ 2.18
NPAS3-210ENST00000551492 RICTORQ6R327 1708 aa28.65■■■□□ 2.18
NPAS3-210ENST00000551492 KDM5CP41229 1560 aa28.64■■■□□ 2.18
NPAS3-210ENST00000551492 MLH3Q9UHC1 1453 aa28.64■■■□□ 2.18
NPAS3-210ENST00000551492 UGGT1Q9NYU2 1555 aa28.63■■■□□ 2.17
NPAS3-210ENST00000551492 CNGB1Q14028 1251 aaPredicted RBP28.62■■■□□ 2.17
NPAS3-210ENST00000551492 CCDC144AA2RUR9 1427 aa28.61■■■□□ 2.17
NPAS3-210ENST00000551492 KANK1Q14678 1352 aa28.61■■■□□ 2.17
NPAS3-210ENST00000551492 A0A0U1RQG5 324 aaPredicted RBP28.61■■■□□ 2.17
NPAS3-210ENST00000551492 POLR3GLQ9BT43 218 aa28.61■■■□□ 2.17
NPAS3-210ENST00000551492 CFAP74Q9C0B2 1584 aa28.6■■■□□ 2.17
NPAS3-210ENST00000551492 DDX10Q13206 875 aaKnown RBP28.59■■■□□ 2.17
NPAS3-210ENST00000551492 DIP2CQ9Y2E4 1556 aa28.58■■■□□ 2.17
NPAS3-210ENST00000551492 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
NPAS3-210ENST00000551492 UNC13BO14795 1591 aa28.57■■■□□ 2.16
NPAS3-210ENST00000551492 NBPF1Q3BBV0 1214 aa28.56■■■□□ 2.16
NPAS3-210ENST00000551492 HSPA5P11021 654 aaKnown RBP28.55■■■□□ 2.16
NPAS3-210ENST00000551492 CEBPAP49715 358 aaPredicted RBP28.53■■■□□ 2.16
NPAS3-210ENST00000551492 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 IRX6P78412 446 aaPredicted RBP28.52■■■□□ 2.16
NPAS3-210ENST00000551492 BRPF3Q9ULD4 1205 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 CEP152O94986 1710 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 SIGLEC1Q9BZZ2 1709 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 E9PCH4 1651 aa28.52■■■□□ 2.16
NPAS3-210ENST00000551492 IQGAP3Q86VI3 1631 aa28.51■■■□□ 2.15
NPAS3-210ENST00000551492 ATP10AO60312 1499 aa28.48■■■□□ 2.15
NPAS3-210ENST00000551492 C11orf95C9JLR9 678 aaPredicted RBP28.48■■■□□ 2.15
NPAS3-210ENST00000551492 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
NPAS3-210ENST00000551492 NPATQ14207 1427 aa28.45■■■□□ 2.15
NPAS3-210ENST00000551492 PRDM15P57071 1507 aaPredicted RBP28.44■■■□□ 2.14
NPAS3-210ENST00000551492 CARD11Q9BXL7 1154 aa28.42■■■□□ 2.14
NPAS3-210ENST00000551492 IDI1Q13907 227 aa28.41■■■□□ 2.14
NPAS3-210ENST00000551492 GLIPR1L2Q4G1C9 344 aa28.41■■■□□ 2.14
NPAS3-210ENST00000551492 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
NPAS3-210ENST00000551492 EIF4G2P78344 907 aaKnown RBP eCLIP28.38■■■□□ 2.13
NPAS3-210ENST00000551492 DEPDC5O75140 1603 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms