RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 PZPP20742 1482 aa13.88□□□□□ -0.19
PKP2-206ENST00000549461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
PKP2-206ENST00000549461 DEPDC5O75140 1603 aa13.87□□□□□ -0.19
PKP2-206ENST00000549461 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
PKP2-206ENST00000549461 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
PKP2-206ENST00000549461 NUP155O75694 1391 aa13.86□□□□□ -0.19
PKP2-206ENST00000549461 BCORL1Q5H9F3 1711 aa13.86□□□□□ -0.19
PKP2-206ENST00000549461 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
PKP2-206ENST00000549461 FOXD1Q16676 465 aa13.84□□□□□ -0.19
PKP2-206ENST00000549461 CCER1Q8TC90 406 aaPredicted RBP13.84□□□□□ -0.19
PKP2-206ENST00000549461 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
PKP2-206ENST00000549461 AGLP35573 1532 aa13.84□□□□□ -0.19
PKP2-206ENST00000549461 PRDM15P57071 1507 aaPredicted RBP13.84□□□□□ -0.19
PKP2-206ENST00000549461 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
PKP2-206ENST00000549461 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.19
PKP2-206ENST00000549461 IQGAP3Q86VI3 1631 aa13.83□□□□□ -0.2
PKP2-206ENST00000549461 GGT6Q6P531 493 aa13.83□□□□□ -0.2
PKP2-206ENST00000549461 MLECQ14165 292 aa13.81□□□□□ -0.2
PKP2-206ENST00000549461 SLC4A1APQ9BWU0 796 aaKnown RBP13.81□□□□□ -0.2
PKP2-206ENST00000549461 CEP152O94986 1710 aa13.8□□□□□ -0.2
PKP2-206ENST00000549461 PKD2Q13563 968 aa13.79□□□□□ -0.2
PKP2-206ENST00000549461 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
PKP2-206ENST00000549461 ABCC3O15438 1527 aa13.79□□□□□ -0.2
PKP2-206ENST00000549461 E9PCH4 1651 aa13.76□□□□□ -0.21
PKP2-206ENST00000549461 KANK1Q14678 1352 aa13.76□□□□□ -0.21
PKP2-206ENST00000549461 TET3O43151 1660 aa13.75□□□□□ -0.21
PKP2-206ENST00000549461 LMTK2Q8IWU2 1503 aa13.75□□□□□ -0.21
PKP2-206ENST00000549461 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
PKP2-206ENST00000549461 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
PKP2-206ENST00000549461 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
PKP2-206ENST00000549461 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
PKP2-206ENST00000549461 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
PKP2-206ENST00000549461 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
PKP2-206ENST00000549461 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
PKP2-206ENST00000549461 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
PKP2-206ENST00000549461 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
PKP2-206ENST00000549461 NPATQ14207 1427 aa13.72□□□□□ -0.21
PKP2-206ENST00000549461 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
PKP2-206ENST00000549461 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 PTPRTO14522 1441 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 FBXO31Q5XUX0 539 aaPredicted RBP13.67□□□□□ -0.22
PKP2-206ENST00000549461 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 MADDQ8WXG6 1647 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
PKP2-206ENST00000549461 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
PKP2-206ENST00000549461 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
PKP2-206ENST00000549461 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
PKP2-206ENST00000549461 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
PKP2-206ENST00000549461 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
PKP2-206ENST00000549461 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
PKP2-206ENST00000549461 SYNMO15061 1565 aa13.65□□□□□ -0.22
PKP2-206ENST00000549461 TRPM2O94759 1503 aa13.64□□□□□ -0.23
PKP2-206ENST00000549461 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
PKP2-206ENST00000549461 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
PKP2-206ENST00000549461 PREX1Q8TCU6 1659 aa13.64□□□□□ -0.23
PKP2-206ENST00000549461 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
PKP2-206ENST00000549461 NOS1P29475 1434 aa13.64□□□□□ -0.23
PKP2-206ENST00000549461 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
PKP2-206ENST00000549461 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
PKP2-206ENST00000549461 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
PKP2-206ENST00000549461 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
PKP2-206ENST00000549461 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
PKP2-206ENST00000549461 C3P01024 1663 aa13.62□□□□□ -0.23
PKP2-206ENST00000549461 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
PKP2-206ENST00000549461 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
PKP2-206ENST00000549461 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
PKP2-206ENST00000549461 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
PKP2-206ENST00000549461 IDI1Q13907 227 aa13.57□□□□□ -0.24
PKP2-206ENST00000549461 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
PKP2-206ENST00000549461 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
PKP2-206ENST00000549461 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
PKP2-206ENST00000549461 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
PKP2-206ENST00000549461 TNRQ92752 1358 aa13.55□□□□□ -0.24
PKP2-206ENST00000549461 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
PKP2-206ENST00000549461 PTPRMP28827 1452 aa13.54□□□□□ -0.24
PKP2-206ENST00000549461 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
PKP2-206ENST00000549461 CHGAP10645 457 aaKnown RBP13.53□□□□□ -0.24
PKP2-206ENST00000549461 ZEB1P37275 1124 aaPredicted RBP13.53□□□□□ -0.24
PKP2-206ENST00000549461 KIF1BO60333 1816 aa13.51□□□□□ -0.25
PKP2-206ENST00000549461 MYO5BQ9ULV0 1848 aa13.51□□□□□ -0.25
PKP2-206ENST00000549461 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
PKP2-206ENST00000549461 SLC52A1Q9NWF4 448 aa13.51□□□□□ -0.25
PKP2-206ENST00000549461 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
PKP2-206ENST00000549461 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
PKP2-206ENST00000549461 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
PKP2-206ENST00000549461 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
PKP2-206ENST00000549461 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
PKP2-206ENST00000549461 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
PKP2-206ENST00000549461 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
PKP2-206ENST00000549461 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
PKP2-206ENST00000549461 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
PKP2-206ENST00000549461 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
PKP2-206ENST00000549461 ZNF326Q5BKZ1 582 aaKnown RBP13.46□□□□□ -0.25
PKP2-206ENST00000549461 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
PKP2-206ENST00000549461 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
PKP2-206ENST00000549461 NEXMIFQ5QGS0 1516 aa13.45□□□□□ -0.26
PKP2-206ENST00000549461 PPLO60437 1756 aa13.45□□□□□ -0.26
PKP2-206ENST00000549461 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
PKP2-206ENST00000549461 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms