RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ZC3H13Q5T200 1668 aaKnown RBP27.36■■□□□ 1.97
TSFM-208ENST00000543727 ROCK1Q13464 1354 aa27.34■■□□□ 1.97
TSFM-208ENST00000543727 KDM5DQ9BY66 1539 aa27.32■■□□□ 1.96
TSFM-208ENST00000543727 DEPDC5O75140 1603 aa27.32■■□□□ 1.96
TSFM-208ENST00000543727 KIF3BO15066 747 aa27.32■■□□□ 1.96
TSFM-208ENST00000543727 PRDM15P57071 1507 aaPredicted RBP27.29■■□□□ 1.96
TSFM-208ENST00000543727 SETD1BQ9UPS6 1966 aaKnown RBP27.29■■□□□ 1.96
TSFM-208ENST00000543727 MROH1Q8NDA8 1641 aa27.28■■□□□ 1.96
TSFM-208ENST00000543727 GGT6Q6P531 493 aa27.28■■□□□ 1.96
TSFM-208ENST00000543727 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
TSFM-208ENST00000543727 PTPRKQ15262 1439 aa27.27■■□□□ 1.96
TSFM-208ENST00000543727 CHIC2Q9UKJ5 165 aa27.26■■□□□ 1.95
TSFM-208ENST00000543727 PREX1Q8TCU6 1659 aa27.26■■□□□ 1.95
TSFM-208ENST00000543727 NPATQ14207 1427 aa27.22■■□□□ 1.95
TSFM-208ENST00000543727 ANKRD50Q9ULJ7 1429 aa27.22■■□□□ 1.95
TSFM-208ENST00000543727 ZMYM3Q14202 1370 aa27.21■■□□□ 1.95
TSFM-208ENST00000543727 ABCC3O15438 1527 aa27.2■■□□□ 1.94
TSFM-208ENST00000543727 CEP152O94986 1710 aa27.19■■□□□ 1.94
TSFM-208ENST00000543727 GCC2Q8IWJ2 1684 aa27.19■■□□□ 1.94
TSFM-208ENST00000543727 WASHC2CQ9Y4E1 1318 aa27.17■■□□□ 1.94
TSFM-208ENST00000543727 CAMSAP1Q5T5Y3 1602 aa27.17■■□□□ 1.94
TSFM-208ENST00000543727 PZPP20742 1482 aa27.16■■□□□ 1.94
TSFM-208ENST00000543727 UNC13BO14795 1591 aa27.16■■□□□ 1.94
TSFM-208ENST00000543727 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
TSFM-208ENST00000543727 KANK1Q14678 1352 aa27.14■■□□□ 1.94
TSFM-208ENST00000543727 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
TSFM-208ENST00000543727 LMTK2Q8IWU2 1503 aa27.12■■□□□ 1.93
TSFM-208ENST00000543727 ITGAEP38570 1179 aa27.12■■□□□ 1.93
TSFM-208ENST00000543727 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
TSFM-208ENST00000543727 UHRF1BP1Q6BDS2 1440 aa27.1■■□□□ 1.93
TSFM-208ENST00000543727 ZNF142P52746 1687 aaPredicted RBP27.1■■□□□ 1.93
TSFM-208ENST00000543727 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
TSFM-208ENST00000543727 ARHGAP31Q2M1Z3 1444 aa27.07■■□□□ 1.92
TSFM-208ENST00000543727 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
TSFM-208ENST00000543727 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
TSFM-208ENST00000543727 IQGAP3Q86VI3 1631 aa27.05■■□□□ 1.92
TSFM-208ENST00000543727 TET3O43151 1660 aa27.05■■□□□ 1.92
TSFM-208ENST00000543727 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
TSFM-208ENST00000543727 NAIPQ13075 1403 aa27.03■■□□□ 1.92
TSFM-208ENST00000543727 EFCAB6Q5THR3 1501 aa27.03■■□□□ 1.92
TSFM-208ENST00000543727 RPRD2Q5VT52 1461 aaKnown RBP27■■□□□ 1.91
TSFM-208ENST00000543727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.99■■□□□ 1.91
TSFM-208ENST00000543727 CEP170BQ9Y4F5 1589 aaPredicted RBP26.99■■□□□ 1.91
TSFM-208ENST00000543727 ERVK-7P63135 1459 aa26.98■■□□□ 1.91
TSFM-208ENST00000543727 NLRP1Q9C000 1473 aa26.97■■□□□ 1.91
TSFM-208ENST00000543727 TNRQ92752 1358 aa26.97■■□□□ 1.91
TSFM-208ENST00000543727 CFAP65Q6ZU64 1925 aaKnown RBP26.96■■□□□ 1.91
TSFM-208ENST00000543727 A2ML1A8K2U0 1454 aa26.93■■□□□ 1.9
TSFM-208ENST00000543727 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
TSFM-208ENST00000543727 E9PCH4 1651 aa26.9■■□□□ 1.9
TSFM-208ENST00000543727 KDM5AP29375 1690 aaKnown RBP26.89■■□□□ 1.9
TSFM-208ENST00000543727 NUP155O75694 1391 aa26.89■■□□□ 1.9
TSFM-208ENST00000543727 FBXO31Q5XUX0 539 aaPredicted RBP26.89■■□□□ 1.9
TSFM-208ENST00000543727 PLA2R1Q13018 1463 aa26.86■■□□□ 1.89
TSFM-208ENST00000543727 NOS1P29475 1434 aa26.85■■□□□ 1.89
TSFM-208ENST00000543727 STRCQ7RTU9 1775 aa26.84■■□□□ 1.89
TSFM-208ENST00000543727 SYNMO15061 1565 aa26.83■■□□□ 1.89
TSFM-208ENST00000543727 UGGT1Q9NYU2 1555 aa26.83■■□□□ 1.89
TSFM-208ENST00000543727 UBR1Q8IWV7 1749 aa26.82■■□□□ 1.88
TSFM-208ENST00000543727 HSPA2P54652 639 aa26.81■■□□□ 1.88
TSFM-208ENST00000543727 POLR1AO95602 1720 aaPredicted RBP26.8■■□□□ 1.88
TSFM-208ENST00000543727 SPHKAPQ2M3C7 1700 aa26.79■■□□□ 1.88
TSFM-208ENST00000543727 SETD5Q9C0A6 1442 aa26.78■■□□□ 1.88
TSFM-208ENST00000543727 PIK3C2BO00750 1634 aa26.78■■□□□ 1.88
TSFM-208ENST00000543727 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
TSFM-208ENST00000543727 SLC52A1Q9NWF4 448 aa26.73■■□□□ 1.87
TSFM-208ENST00000543727 DMRT2Q9Y5R5 561 aa26.73■■□□□ 1.87
TSFM-208ENST00000543727 ADGRB3O60242 1522 aa26.72■■□□□ 1.87
TSFM-208ENST00000543727 PKD2Q13563 968 aa26.71■■□□□ 1.87
TSFM-208ENST00000543727 PTPRTO14522 1441 aa26.7■■□□□ 1.86
TSFM-208ENST00000543727 TRIM52Q96A61 297 aa26.69■■□□□ 1.86
TSFM-208ENST00000543727 SLIT1O75093 1534 aa26.68■■□□□ 1.86
TSFM-208ENST00000543727 TRPM2O94759 1503 aa26.67■■□□□ 1.86
TSFM-208ENST00000543727 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
TSFM-208ENST00000543727 HRCP23327 699 aa26.65■■□□□ 1.86
TSFM-208ENST00000543727 ARHGAP23Q9P227 1491 aa26.65■■□□□ 1.86
TSFM-208ENST00000543727 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
TSFM-208ENST00000543727 IDI1Q13907 227 aa26.64■■□□□ 1.86
TSFM-208ENST00000543727 MYO5BQ9ULV0 1848 aa26.64■■□□□ 1.85
TSFM-208ENST00000543727 NEURL4Q96JN8 1562 aa26.63■■□□□ 1.85
TSFM-208ENST00000543727 SLC4A1APQ9BWU0 796 aaKnown RBP26.63■■□□□ 1.85
TSFM-208ENST00000543727 MED14O60244 1454 aa26.62■■□□□ 1.85
TSFM-208ENST00000543727 ANKLE2Q86XL3 938 aa26.6■■□□□ 1.85
TSFM-208ENST00000543727 STAG3Q9UJ98 1225 aa26.6■■□□□ 1.85
TSFM-208ENST00000543727 KIF1BO60333 1816 aa26.6■■□□□ 1.85
TSFM-208ENST00000543727 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
TSFM-208ENST00000543727 SCAF11Q99590 1463 aaKnown RBP26.58■■□□□ 1.85
TSFM-208ENST00000543727 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.84
TSFM-208ENST00000543727 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
TSFM-208ENST00000543727 NCKAP5LQ9HCH0 1330 aa26.55■■□□□ 1.84
TSFM-208ENST00000543727 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
TSFM-208ENST00000543727 EID1Q9Y6B2 187 aa26.52■■□□□ 1.84
TSFM-208ENST00000543727 NPHP4O75161 1426 aaPredicted RBP26.51■■□□□ 1.83
TSFM-208ENST00000543727 ZFYVE9O95405 1425 aa26.49■■□□□ 1.83
TSFM-208ENST00000543727 HDGFP51858 240 aaKnown RBP26.48■■□□□ 1.83
TSFM-208ENST00000543727 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
TSFM-208ENST00000543727 TXNDC2Q86VQ3 553 aa26.46■■□□□ 1.83
TSFM-208ENST00000543727 CCDC144AA2RUR9 1427 aa26.44■■□□□ 1.82
TSFM-208ENST00000543727 RIMS2Q9UQ26 1411 aa26.44■■□□□ 1.82
TSFM-208ENST00000543727 LTKP29376 864 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms