RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ATP10AO60312 1499 aa11.08□□□□□ -0.64
TRIM59-208ENST00000543469 SLC52A1Q9NWF4 448 aa11.08□□□□□ -0.64
TRIM59-208ENST00000543469 RPGRIP1LQ68CZ1 1315 aa11.07□□□□□ -0.64
TRIM59-208ENST00000543469 ZFYVE16Q7Z3T8 1539 aa11.07□□□□□ -0.64
TRIM59-208ENST00000543469 TRAPPC8Q9Y2L5 1435 aa11.07□□□□□ -0.64
TRIM59-208ENST00000543469 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
TRIM59-208ENST00000543469 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
TRIM59-208ENST00000543469 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
TRIM59-208ENST00000543469 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
TRIM59-208ENST00000543469 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
TRIM59-208ENST00000543469 MLECQ14165 292 aa11.05□□□□□ -0.64
TRIM59-208ENST00000543469 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
TRIM59-208ENST00000543469 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
TRIM59-208ENST00000543469 CROCC2H7BZ55 1655 aa11.03□□□□□ -0.64
TRIM59-208ENST00000543469 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.64
TRIM59-208ENST00000543469 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
TRIM59-208ENST00000543469 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.65
TRIM59-208ENST00000543469 ANP32CO43423 234 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 DCAF11Q8TEB1 546 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 CARD11Q9BXL7 1154 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 POLR3GLQ9BT43 218 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
TRIM59-208ENST00000543469 SIN3AQ96ST3 1273 aa11□□□□□ -0.65
TRIM59-208ENST00000543469 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
TRIM59-208ENST00000543469 DIP2BQ9P265 1576 aa11□□□□□ -0.65
TRIM59-208ENST00000543469 PTPRKQ15262 1439 aa11□□□□□ -0.65
TRIM59-208ENST00000543469 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
TRIM59-208ENST00000543469 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
TRIM59-208ENST00000543469 MAP3K4Q9Y6R4 1608 aa10.97□□□□□ -0.65
TRIM59-208ENST00000543469 TMF1P82094 1093 aa10.96□□□□□ -0.65
TRIM59-208ENST00000543469 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.66
TRIM59-208ENST00000543469 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
TRIM59-208ENST00000543469 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
TRIM59-208ENST00000543469 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
TRIM59-208ENST00000543469 KDM5CP41229 1560 aa10.94□□□□□ -0.66
TRIM59-208ENST00000543469 KDM6BO15054 1643 aa10.93□□□□□ -0.66
TRIM59-208ENST00000543469 ARHGEF12Q9NZN5 1544 aa10.93□□□□□ -0.66
TRIM59-208ENST00000543469 POGKQ9P215 609 aa10.93□□□□□ -0.66
TRIM59-208ENST00000543469 UNC13BO14795 1591 aa10.93□□□□□ -0.66
TRIM59-208ENST00000543469 AGLP35573 1532 aa10.92□□□□□ -0.66
TRIM59-208ENST00000543469 FOXD1Q16676 465 aa10.92□□□□□ -0.66
TRIM59-208ENST00000543469 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
TRIM59-208ENST00000543469 IQGAP3Q86VI3 1631 aa10.9□□□□□ -0.66
TRIM59-208ENST00000543469 TNRQ92752 1358 aa10.9□□□□□ -0.66
TRIM59-208ENST00000543469 PZPP20742 1482 aa10.9□□□□□ -0.66
TRIM59-208ENST00000543469 TET3O43151 1660 aa10.9□□□□□ -0.66
TRIM59-208ENST00000543469 LMTK2Q8IWU2 1503 aa10.89□□□□□ -0.67
TRIM59-208ENST00000543469 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
TRIM59-208ENST00000543469 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
TRIM59-208ENST00000543469 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
TRIM59-208ENST00000543469 ARHGEF40Q8TER5 1519 aa10.88□□□□□ -0.67
TRIM59-208ENST00000543469 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
TRIM59-208ENST00000543469 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
TRIM59-208ENST00000543469 NEFMP07197 916 aa10.86□□□□□ -0.67
TRIM59-208ENST00000543469 PRDM15P57071 1507 aaPredicted RBP10.86□□□□□ -0.67
TRIM59-208ENST00000543469 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
TRIM59-208ENST00000543469 DIP2CQ9Y2E4 1556 aa10.84□□□□□ -0.67
TRIM59-208ENST00000543469 TRPM2O94759 1503 aa10.84□□□□□ -0.67
TRIM59-208ENST00000543469 USP47Q96K76 1375 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 YEATS2Q9ULM3 1422 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 RNF17Q9BXT8 1623 aaKnown RBP10.83□□□□□ -0.68
TRIM59-208ENST00000543469 C14orf37Q86TY3 774 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 EVC2Q86UK5 1308 aa10.83□□□□□ -0.68
TRIM59-208ENST00000543469 EFCAB6Q5THR3 1501 aa10.82□□□□□ -0.68
TRIM59-208ENST00000543469 ZMYM3Q14202 1370 aa10.82□□□□□ -0.68
TRIM59-208ENST00000543469 ABCC3O15438 1527 aa10.82□□□□□ -0.68
TRIM59-208ENST00000543469 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
TRIM59-208ENST00000543469 NLRP1Q9C000 1473 aa10.82□□□□□ -0.68
TRIM59-208ENST00000543469 PTPRTO14522 1441 aa10.82□□□□□ -0.68
TRIM59-208ENST00000543469 KIDINS220Q9ULH0 1771 aa10.8□□□□□ -0.68
TRIM59-208ENST00000543469 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
TRIM59-208ENST00000543469 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
TRIM59-208ENST00000543469 CENPJQ9HC77 1338 aaPredicted RBP10.79□□□□□ -0.68
TRIM59-208ENST00000543469 UHRF1BP1Q6BDS2 1440 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 TXNDC2Q86VQ3 553 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
TRIM59-208ENST00000543469 ABCA6Q8N139 1617 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 NPATQ14207 1427 aa10.79□□□□□ -0.68
TRIM59-208ENST00000543469 KTN1Q86UP2 1357 aaKnown RBP10.78□□□□□ -0.68
TRIM59-208ENST00000543469 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
TRIM59-208ENST00000543469 NEFLP07196 543 aa10.77□□□□□ -0.69
TRIM59-208ENST00000543469 RALBP1Q15311 655 aa10.77□□□□□ -0.69
TRIM59-208ENST00000543469 NEURL4Q96JN8 1562 aa10.77□□□□□ -0.69
TRIM59-208ENST00000543469 SRPK2P78362 688 aaKnown RBP10.77□□□□□ -0.69
TRIM59-208ENST00000543469 DEPDC5O75140 1603 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 IDI1Q13907 227 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 MYOM2P54296 1465 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 ERVK-7P63135 1459 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 SCAF11Q99590 1463 aaKnown RBP10.76□□□□□ -0.69
TRIM59-208ENST00000543469 RIMS2Q9UQ26 1411 aa10.76□□□□□ -0.69
TRIM59-208ENST00000543469 PNNQ9H307 717 aaKnown RBP10.76□□□□□ -0.69
TRIM59-208ENST00000543469 BCORL1Q5H9F3 1711 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms