RNA–Protein interactions for RNA: ENST00000541386.5

RAP1B-225, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-225ENST00000541386 DHX29Q7Z478 1369 aaKnown RBP29.08■■■□□ 2.25
RAP1B-225ENST00000541386 RTEL1-TNFRSF6BF6WH68 1400 aa29.07■■■□□ 2.24
RAP1B-225ENST00000541386 PIP4K2BP78356 416 aa29.07■■■□□ 2.24
RAP1B-225ENST00000541386 TNRQ92752 1358 aa29.04■■■□□ 2.24
RAP1B-225ENST00000541386 CPS1P31327 1500 aa29.04■■■□□ 2.24
RAP1B-225ENST00000541386 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
RAP1B-225ENST00000541386 TOM1O60784 492 aa29.03■■■□□ 2.24
RAP1B-225ENST00000541386 MED1Q15648 1581 aaPredicted RBP29.03■■■□□ 2.24
RAP1B-225ENST00000541386 KIF3BO15066 747 aa29.02■■■□□ 2.24
RAP1B-225ENST00000541386 PZPP20742 1482 aa28.99■■■□□ 2.23
RAP1B-225ENST00000541386 EHBP1L1Q8N3D4 1523 aa28.98■■■□□ 2.23
RAP1B-225ENST00000541386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.98■■■□□ 2.236e-8■□□□□ 11.2
RAP1B-225ENST00000541386 KDM5DQ9BY66 1539 aa28.97■■■□□ 2.23
RAP1B-225ENST00000541386 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
RAP1B-225ENST00000541386 VWDEQ8N2E2 1590 aa28.96■■■□□ 2.23
RAP1B-225ENST00000541386 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
RAP1B-225ENST00000541386 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
RAP1B-225ENST00000541386 THEMISQ8N1K5 641 aaPredicted RBP28.93■■■□□ 2.22
RAP1B-225ENST00000541386 FAM135AQ9P2D6 1515 aa28.93■■■□□ 2.22
RAP1B-225ENST00000541386 ALKQ9UM73 1620 aa28.92■■■□□ 2.22
RAP1B-225ENST00000541386 MIA2Q96PC5 1412 aa28.92■■■□□ 2.22
RAP1B-225ENST00000541386 CCDC141Q6ZP82 1450 aa28.91■■■□□ 2.22
RAP1B-225ENST00000541386 UGGT1Q9NYU2 1555 aa28.9■■■□□ 2.22
RAP1B-225ENST00000541386 DEPDC5O75140 1603 aa28.89■■■□□ 2.22
RAP1B-225ENST00000541386 MED14O60244 1454 aa28.89■■■□□ 2.22
RAP1B-225ENST00000541386 NLRP1Q9C000 1473 aa28.89■■■□□ 2.22
RAP1B-225ENST00000541386 NPHP4O75161 1426 aaPredicted RBP28.88■■■□□ 2.21
RAP1B-225ENST00000541386 CAMSAP2Q08AD1 1489 aa28.88■■■□□ 2.21
RAP1B-225ENST00000541386 STRCP1A6NGW2 1772 aa28.86■■■□□ 2.21
RAP1B-225ENST00000541386 RSPH4AQ5TD94 716 aa28.86■■■□□ 2.21
RAP1B-225ENST00000541386 IQGAP1P46940 1657 aa28.84■■■□□ 2.21
RAP1B-225ENST00000541386 NCOA2Q15596 1464 aa28.83■■■□□ 2.21
RAP1B-225ENST00000541386 CFAP65Q6ZU64 1925 aaKnown RBP28.8■■■□□ 2.2
RAP1B-225ENST00000541386 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
RAP1B-225ENST00000541386 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
RAP1B-225ENST00000541386 SENP3Q9H4L4 574 aaPredicted RBP28.77■■■□□ 2.2
RAP1B-225ENST00000541386 LRRC7Q96NW7 1537 aa28.77■■■□□ 2.2
RAP1B-225ENST00000541386 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
RAP1B-225ENST00000541386 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
RAP1B-225ENST00000541386 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.19
RAP1B-225ENST00000541386 ABCC3O15438 1527 aa28.74■■■□□ 2.19
RAP1B-225ENST00000541386 ZC3H13Q5T200 1668 aaKnown RBP28.72■■■□□ 2.19
RAP1B-225ENST00000541386 SYNMO15061 1565 aa28.7■■■□□ 2.18
RAP1B-225ENST00000541386 ERVK-7P63135 1459 aa28.69■■■□□ 2.18
RAP1B-225ENST00000541386 UBR1Q8IWV7 1749 aa28.68■■■□□ 2.18
RAP1B-225ENST00000541386 CEP152O94986 1710 aa28.67■■■□□ 2.18
RAP1B-225ENST00000541386 MAST1Q9Y2H9 1570 aa28.66■■■□□ 2.18
RAP1B-225ENST00000541386 MROH1Q8NDA8 1641 aa28.65■■■□□ 2.18
RAP1B-225ENST00000541386 EIF2AK4Q9P2K8 1649 aaKnown RBP28.65■■■□□ 2.18
RAP1B-225ENST00000541386 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
RAP1B-225ENST00000541386 SCAF11Q99590 1463 aaKnown RBP28.6■■■□□ 2.17
RAP1B-225ENST00000541386 LTKP29376 864 aa28.6■■■□□ 2.17
RAP1B-225ENST00000541386 RGS17Q9UGC6 210 aaPredicted RBP28.59■■■□□ 2.17
RAP1B-225ENST00000541386 TXNDC2Q86VQ3 553 aa28.57■■■□□ 2.16
RAP1B-225ENST00000541386 LRRC9Q6ZRR7 1453 aa28.56■■■□□ 2.16
RAP1B-225ENST00000541386 ARHGAP23Q9P227 1491 aa28.56■■■□□ 2.16
RAP1B-225ENST00000541386 SLIT1O75093 1534 aa28.54■■■□□ 2.16
RAP1B-225ENST00000541386 DUOX2Q9NRD8 1548 aa28.5■■■□□ 2.15
RAP1B-225ENST00000541386 ARHGAP31Q2M1Z3 1444 aa28.47■■■□□ 2.15
RAP1B-225ENST00000541386 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
RAP1B-225ENST00000541386 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
RAP1B-225ENST00000541386 PIK3C2BO00750 1634 aa28.47■■■□□ 2.15
RAP1B-225ENST00000541386 MYOM3Q5VTT5 1437 aa28.44■■■□□ 2.14
RAP1B-225ENST00000541386 PRDM15P57071 1507 aaPredicted RBP28.44■■■□□ 2.14
RAP1B-225ENST00000541386 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
RAP1B-225ENST00000541386 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
RAP1B-225ENST00000541386 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
RAP1B-225ENST00000541386 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
RAP1B-225ENST00000541386 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
RAP1B-225ENST00000541386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.14
RAP1B-225ENST00000541386 RRP7BPQ9NSQ0 103 aa28.39■■■□□ 2.14
RAP1B-225ENST00000541386 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
RAP1B-225ENST00000541386 CROCC2H7BZ55 1655 aa28.38■■■□□ 2.13
RAP1B-225ENST00000541386 STAG3Q9UJ98 1225 aa28.37■■■□□ 2.13
RAP1B-225ENST00000541386 ERBINQ96RT1 1412 aa28.36■■■□□ 2.13
RAP1B-225ENST00000541386 ROBO1Q9Y6N7 1651 aa28.36■■■□□ 2.13
RAP1B-225ENST00000541386 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
RAP1B-225ENST00000541386 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
RAP1B-225ENST00000541386 KCNA6P17658 529 aa28.35■■■□□ 2.13
RAP1B-225ENST00000541386 ABCC5O15440 1437 aa28.35■■■□□ 2.13
RAP1B-225ENST00000541386 IDI1Q13907 227 aa28.34■■■□□ 2.13
RAP1B-225ENST00000541386 RBM33Q96EV2 1170 aaKnown RBP28.34■■■□□ 2.13
RAP1B-225ENST00000541386 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
RAP1B-225ENST00000541386 TET3O43151 1660 aa28.33■■■□□ 2.13
RAP1B-225ENST00000541386 SLC26A8Q96RN1 970 aa28.33■■■□□ 2.13
RAP1B-225ENST00000541386 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
RAP1B-225ENST00000541386 KANK1Q14678 1352 aa28.28■■■□□ 2.12
RAP1B-225ENST00000541386 PTPN23Q9H3S7 1636 aa28.28■■■□□ 2.12
RAP1B-225ENST00000541386 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
RAP1B-225ENST00000541386 LMTK2Q8IWU2 1503 aa28.25■■■□□ 2.11
RAP1B-225ENST00000541386 DAPK1P53355 1430 aa28.25■■■□□ 2.11
RAP1B-225ENST00000541386 NWD1Q149M9 1564 aa28.23■■■□□ 2.11
RAP1B-225ENST00000541386 PHLPP1O60346 1717 aa28.21■■■□□ 2.11
RAP1B-225ENST00000541386 NKTRP30414 1462 aaKnown RBP28.21■■■□□ 2.11
RAP1B-225ENST00000541386 SETD1AO15047 1707 aaKnown RBP28.21■■■□□ 2.11
RAP1B-225ENST00000541386 NOS1P29475 1434 aa28.2■■■□□ 2.11
RAP1B-225ENST00000541386 ADGRB3O60242 1522 aa28.2■■■□□ 2.1
RAP1B-225ENST00000541386 CHIC2Q9UKJ5 165 aa28.2■■■□□ 2.1
RAP1B-225ENST00000541386 SLAIN2Q9P270 581 aa28.18■■■□□ 2.1
RAP1B-225ENST00000541386 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 581 ms