RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
CYB561A3-215ENST00000540317 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
CYB561A3-215ENST00000540317 MROH2AA6NES4 1674 aa17.61■□□□□ 0.41
CYB561A3-215ENST00000540317 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
CYB561A3-215ENST00000540317 CHIC2Q9UKJ5 165 aa17.6■□□□□ 0.41
CYB561A3-215ENST00000540317 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
CYB561A3-215ENST00000540317 ABCC5O15440 1437 aa17.59■□□□□ 0.41
CYB561A3-215ENST00000540317 PTPRKQ15262 1439 aa17.59■□□□□ 0.41
CYB561A3-215ENST00000540317 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.41
CYB561A3-215ENST00000540317 MAST1Q9Y2H9 1570 aa17.58■□□□□ 0.4
CYB561A3-215ENST00000540317 KIF15Q9NS87 1388 aa17.56■□□□□ 0.4
CYB561A3-215ENST00000540317 DAPK1P53355 1430 aa17.56■□□□□ 0.4
CYB561A3-215ENST00000540317 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
CYB561A3-215ENST00000540317 ITGAEP38570 1179 aa17.55■□□□□ 0.4
CYB561A3-215ENST00000540317 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
CYB561A3-215ENST00000540317 TCOF1Q13428 1488 aaKnown RBP17.54■□□□□ 0.4
CYB561A3-215ENST00000540317 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
CYB561A3-215ENST00000540317 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
CYB561A3-215ENST00000540317 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
CYB561A3-215ENST00000540317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
CYB561A3-215ENST00000540317 SHANK2Q9UPX8 1470 aa17.52■□□□□ 0.4
CYB561A3-215ENST00000540317 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.4
CYB561A3-215ENST00000540317 TNRQ92752 1358 aa17.51■□□□□ 0.39
CYB561A3-215ENST00000540317 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
CYB561A3-215ENST00000540317 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
CYB561A3-215ENST00000540317 STRCQ7RTU9 1775 aa17.5■□□□□ 0.39
CYB561A3-215ENST00000540317 CERKQ8TCT0 537 aa17.5■□□□□ 0.39
CYB561A3-215ENST00000540317 PZPP20742 1482 aa17.5■□□□□ 0.39
CYB561A3-215ENST00000540317 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
CYB561A3-215ENST00000540317 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
CYB561A3-215ENST00000540317 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
CYB561A3-215ENST00000540317 NCOA1Q15788 1441 aa17.49■□□□□ 0.39
CYB561A3-215ENST00000540317 PTPRTO14522 1441 aa17.47■□□□□ 0.39
CYB561A3-215ENST00000540317 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
CYB561A3-215ENST00000540317 PKD2Q13563 968 aa17.47■□□□□ 0.39
CYB561A3-215ENST00000540317 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
CYB561A3-215ENST00000540317 EIF2AK4Q9P2K8 1649 aaKnown RBP17.47■□□□□ 0.39
CYB561A3-215ENST00000540317 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
CYB561A3-215ENST00000540317 CROCC2H7BZ55 1655 aa17.46■□□□□ 0.39
CYB561A3-215ENST00000540317 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
CYB561A3-215ENST00000540317 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
CYB561A3-215ENST00000540317 ABCC3O15438 1527 aa17.46■□□□□ 0.38
CYB561A3-215ENST00000540317 THEMISQ8N1K5 641 aaPredicted RBP17.45■□□□□ 0.38
CYB561A3-215ENST00000540317 KANK1Q14678 1352 aa17.45■□□□□ 0.38
CYB561A3-215ENST00000540317 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
CYB561A3-215ENST00000540317 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
CYB561A3-215ENST00000540317 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
CYB561A3-215ENST00000540317 MROH1Q8NDA8 1641 aa17.41■□□□□ 0.38
CYB561A3-215ENST00000540317 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
CYB561A3-215ENST00000540317 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
CYB561A3-215ENST00000540317 ZC3H13Q5T200 1668 aaKnown RBP17.4■□□□□ 0.38
CYB561A3-215ENST00000540317 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.38
CYB561A3-215ENST00000540317 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
CYB561A3-215ENST00000540317 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
CYB561A3-215ENST00000540317 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
CYB561A3-215ENST00000540317 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
CYB561A3-215ENST00000540317 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
CYB561A3-215ENST00000540317 CEP152O94986 1710 aa17.37■□□□□ 0.37
CYB561A3-215ENST00000540317 ZNF335Q9H4Z2 1342 aaPredicted RBP17.36■□□□□ 0.37
CYB561A3-215ENST00000540317 CFAP65Q6ZU64 1925 aaKnown RBP17.36■□□□□ 0.37
CYB561A3-215ENST00000540317 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
CYB561A3-215ENST00000540317 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
CYB561A3-215ENST00000540317 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
CYB561A3-215ENST00000540317 NAIPQ13075 1403 aa17.33■□□□□ 0.37
CYB561A3-215ENST00000540317 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
CYB561A3-215ENST00000540317 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
CYB561A3-215ENST00000540317 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
CYB561A3-215ENST00000540317 LTBP4Q8N2S1 1624 aa17.3■□□□□ 0.36
CYB561A3-215ENST00000540317 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
CYB561A3-215ENST00000540317 IDI1Q13907 227 aa17.29■□□□□ 0.36
CYB561A3-215ENST00000540317 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
CYB561A3-215ENST00000540317 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
CYB561A3-215ENST00000540317 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
CYB561A3-215ENST00000540317 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
CYB561A3-215ENST00000540317 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.36
CYB561A3-215ENST00000540317 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
CYB561A3-215ENST00000540317 LTKP29376 864 aa17.25■□□□□ 0.35
CYB561A3-215ENST00000540317 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
CYB561A3-215ENST00000540317 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
CYB561A3-215ENST00000540317 NUP155O75694 1391 aa17.24■□□□□ 0.35
CYB561A3-215ENST00000540317 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
CYB561A3-215ENST00000540317 MED14O60244 1454 aa17.24■□□□□ 0.35
CYB561A3-215ENST00000540317 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
CYB561A3-215ENST00000540317 UBAP1LF5GYI3 381 aa17.22■□□□□ 0.35
CYB561A3-215ENST00000540317 NOS1P29475 1434 aa17.22■□□□□ 0.35
CYB561A3-215ENST00000540317 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
CYB561A3-215ENST00000540317 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
CYB561A3-215ENST00000540317 SCAF11Q99590 1463 aaKnown RBP17.21■□□□□ 0.35
CYB561A3-215ENST00000540317 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
CYB561A3-215ENST00000540317 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
CYB561A3-215ENST00000540317 RPRD2Q5VT52 1461 aaKnown RBP17.2■□□□□ 0.34
CYB561A3-215ENST00000540317 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
CYB561A3-215ENST00000540317 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
CYB561A3-215ENST00000540317 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
CYB561A3-215ENST00000540317 BCANQ96GW7 911 aa17.18■□□□□ 0.34
CYB561A3-215ENST00000540317 SYNMO15061 1565 aa17.18■□□□□ 0.34
CYB561A3-215ENST00000540317 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
CYB561A3-215ENST00000540317 SLIT1O75093 1534 aa17.17■□□□□ 0.34
CYB561A3-215ENST00000540317 UNC13BO14795 1591 aa17.17■□□□□ 0.34
CYB561A3-215ENST00000540317 TET3O43151 1660 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms