RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 DEPDC5O75140 1603 aa20.95■□□□□ 0.94
PDE4C-204ENST00000539010 NUP155O75694 1391 aa20.95■□□□□ 0.94
PDE4C-204ENST00000539010 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
PDE4C-204ENST00000539010 KANK1Q14678 1352 aa20.94■□□□□ 0.94
PDE4C-204ENST00000539010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
PDE4C-204ENST00000539010 ARID4BQ4LE39 1312 aaPredicted RBP20.93■□□□□ 0.94
PDE4C-204ENST00000539010 GGT6Q6P531 493 aa20.93■□□□□ 0.94
PDE4C-204ENST00000539010 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
PDE4C-204ENST00000539010 PRDM15P57071 1507 aaPredicted RBP20.91■□□□□ 0.94
PDE4C-204ENST00000539010 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.94
PDE4C-204ENST00000539010 SIGLEC1Q9BZZ2 1709 aa20.89■□□□□ 0.93
PDE4C-204ENST00000539010 IQGAP3Q86VI3 1631 aa20.88■□□□□ 0.93
PDE4C-204ENST00000539010 MROH1Q8NDA8 1641 aa20.88■□□□□ 0.93
PDE4C-204ENST00000539010 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
PDE4C-204ENST00000539010 MPHOSPH9Q99550 1183 aa20.87■□□□□ 0.93
PDE4C-204ENST00000539010 FAM135AQ9P2D6 1515 aa20.87■□□□□ 0.93
PDE4C-204ENST00000539010 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
PDE4C-204ENST00000539010 PZPP20742 1482 aa20.85■□□□□ 0.93
PDE4C-204ENST00000539010 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
PDE4C-204ENST00000539010 MLECQ14165 292 aa20.85■□□□□ 0.93
PDE4C-204ENST00000539010 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
PDE4C-204ENST00000539010 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.93
PDE4C-204ENST00000539010 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
PDE4C-204ENST00000539010 ESF1Q9H501 851 aaKnown RBP20.82■□□□□ 0.92
PDE4C-204ENST00000539010 LMTK2Q8IWU2 1503 aa20.82■□□□□ 0.92
PDE4C-204ENST00000539010 TET3O43151 1660 aa20.8■□□□□ 0.92
PDE4C-204ENST00000539010 CEP152O94986 1710 aa20.8■□□□□ 0.92
PDE4C-204ENST00000539010 ABCC3O15438 1527 aa20.8■□□□□ 0.92
PDE4C-204ENST00000539010 PKD2Q13563 968 aa20.79■□□□□ 0.92
PDE4C-204ENST00000539010 CNTLNQ9NXG0 1405 aa20.77■□□□□ 0.91
PDE4C-204ENST00000539010 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
PDE4C-204ENST00000539010 EFCAB6Q5THR3 1501 aa20.75■□□□□ 0.91
PDE4C-204ENST00000539010 CAMSAP1Q5T5Y3 1602 aa20.75■□□□□ 0.91
PDE4C-204ENST00000539010 CLTCQ00610 1675 aaKnown RBP20.74■□□□□ 0.91
PDE4C-204ENST00000539010 FER1L4A9Z1Z3 1794 aa20.73■□□□□ 0.91
PDE4C-204ENST00000539010 RPRD2Q5VT52 1461 aaKnown RBP20.73■□□□□ 0.91
PDE4C-204ENST00000539010 ARHGAP31Q2M1Z3 1444 aa20.72■□□□□ 0.91
PDE4C-204ENST00000539010 E9PCH4 1651 aa20.72■□□□□ 0.91
PDE4C-204ENST00000539010 FOXD1Q16676 465 aa20.7■□□□□ 0.91
PDE4C-204ENST00000539010 MROH2AA6NES4 1674 aa20.7■□□□□ 0.9
PDE4C-204ENST00000539010 NPATQ14207 1427 aa20.69■□□□□ 0.9
PDE4C-204ENST00000539010 ADAMTSL3P82987 1691 aa20.69■□□□□ 0.9
PDE4C-204ENST00000539010 ZMYM3Q14202 1370 aa20.68■□□□□ 0.9
PDE4C-204ENST00000539010 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
PDE4C-204ENST00000539010 ANKRD30BQ9BXX2 1392 aa20.67■□□□□ 0.9
PDE4C-204ENST00000539010 MADDQ8WXG6 1647 aa20.65■□□□□ 0.9
PDE4C-204ENST00000539010 SPHKAPQ2M3C7 1700 aa20.65■□□□□ 0.9
PDE4C-204ENST00000539010 PTPRTO14522 1441 aa20.64■□□□□ 0.89
PDE4C-204ENST00000539010 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
PDE4C-204ENST00000539010 TRPM2O94759 1503 aa20.61■□□□□ 0.89
PDE4C-204ENST00000539010 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
PDE4C-204ENST00000539010 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
PDE4C-204ENST00000539010 NOS1P29475 1434 aa20.6■□□□□ 0.89
PDE4C-204ENST00000539010 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
PDE4C-204ENST00000539010 ERVK-7P63135 1459 aa20.59■□□□□ 0.89
PDE4C-204ENST00000539010 C3P01024 1663 aa20.59■□□□□ 0.89
PDE4C-204ENST00000539010 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.88
PDE4C-204ENST00000539010 FBXO31Q5XUX0 539 aaPredicted RBP20.57■□□□□ 0.88
PDE4C-204ENST00000539010 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
PDE4C-204ENST00000539010 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
PDE4C-204ENST00000539010 SLC52A1Q9NWF4 448 aa20.56■□□□□ 0.88
PDE4C-204ENST00000539010 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
PDE4C-204ENST00000539010 SYNMO15061 1565 aa20.53■□□□□ 0.88
PDE4C-204ENST00000539010 TNRQ92752 1358 aa20.53■□□□□ 0.88
PDE4C-204ENST00000539010 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
PDE4C-204ENST00000539010 CLTCL1P53675 1640 aa20.52■□□□□ 0.88
PDE4C-204ENST00000539010 PTPRMP28827 1452 aa20.52■□□□□ 0.87
PDE4C-204ENST00000539010 ZEB1P37275 1124 aaPredicted RBP20.51■□□□□ 0.87
PDE4C-204ENST00000539010 PIK3C2BO00750 1634 aa20.5■□□□□ 0.87
PDE4C-204ENST00000539010 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
PDE4C-204ENST00000539010 KIF1BO60333 1816 aa20.5■□□□□ 0.87
PDE4C-204ENST00000539010 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
PDE4C-204ENST00000539010 KDM4FA0A1W2PPD8 638 aa20.48■□□□□ 0.87
PDE4C-204ENST00000539010 IDI1Q13907 227 aa20.48■□□□□ 0.87
PDE4C-204ENST00000539010 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
PDE4C-204ENST00000539010 UGGT1Q9NYU2 1555 aa20.48■□□□□ 0.87
PDE4C-204ENST00000539010 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
PDE4C-204ENST00000539010 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
PDE4C-204ENST00000539010 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
PDE4C-204ENST00000539010 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
PDE4C-204ENST00000539010 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
PDE4C-204ENST00000539010 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
PDE4C-204ENST00000539010 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
PDE4C-204ENST00000539010 TMEM131LA2VDJ0 1609 aa20.4■□□□□ 0.86
PDE4C-204ENST00000539010 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
PDE4C-204ENST00000539010 KDM5AP29375 1690 aaKnown RBP20.4■□□□□ 0.86
PDE4C-204ENST00000539010 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.86
PDE4C-204ENST00000539010 L3MBTL2Q969R5 705 aa20.39■□□□□ 0.86
PDE4C-204ENST00000539010 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
PDE4C-204ENST00000539010 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
PDE4C-204ENST00000539010 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
PDE4C-204ENST00000539010 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
PDE4C-204ENST00000539010 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
PDE4C-204ENST00000539010 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
PDE4C-204ENST00000539010 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
PDE4C-204ENST00000539010 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
PDE4C-204ENST00000539010 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
PDE4C-204ENST00000539010 THEMISQ8N1K5 641 aaPredicted RBP20.33■□□□□ 0.85
PDE4C-204ENST00000539010 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
PDE4C-204ENST00000539010 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms