RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 PLPPR3Q6T4P5 718 aa32■■■□□ 2.71
LPCAT3-204ENST00000536797 PPP6R1Q9UPN7 881 aa32■■■□□ 2.71
LPCAT3-204ENST00000536797 RNF17Q9BXT8 1623 aaKnown RBP31.98■■■□□ 2.71
LPCAT3-204ENST00000536797 CLTCQ00610 1675 aaKnown RBP31.98■■■□□ 2.71
LPCAT3-204ENST00000536797 MROH2AA6NES4 1674 aa31.98■■■□□ 2.71
LPCAT3-204ENST00000536797 C3P01024 1663 aa31.96■■■□□ 2.71
LPCAT3-204ENST00000536797 ROCK1Q13464 1354 aa31.94■■■□□ 2.7
LPCAT3-204ENST00000536797 FAM135AQ9P2D6 1515 aa31.94■■■□□ 2.7
LPCAT3-204ENST00000536797 CEBPAP49715 358 aaPredicted RBP31.92■■■□□ 2.7
LPCAT3-204ENST00000536797 KDM5DQ9BY66 1539 aa31.92■■■□□ 2.7
LPCAT3-204ENST00000536797 ZMYM3Q14202 1370 aa31.89■■■□□ 2.7
LPCAT3-204ENST00000536797 WASHC2CQ9Y4E1 1318 aa31.88■■■□□ 2.69
LPCAT3-204ENST00000536797 MROH1Q8NDA8 1641 aa31.88■■■□□ 2.69
LPCAT3-204ENST00000536797 ANKRD50Q9ULJ7 1429 aa31.87■■■□□ 2.69
LPCAT3-204ENST00000536797 ZC3H13Q5T200 1668 aaKnown RBP31.85■■■□□ 2.69
LPCAT3-204ENST00000536797 DEPDC5O75140 1603 aa31.85■■■□□ 2.69
LPCAT3-204ENST00000536797 PRDM15P57071 1507 aaPredicted RBP31.84■■■□□ 2.69
LPCAT3-204ENST00000536797 ABCC3O15438 1527 aa31.81■■■□□ 2.68
LPCAT3-204ENST00000536797 CEP152O94986 1710 aa31.78■■■□□ 2.68
LPCAT3-204ENST00000536797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.78■■■□□ 2.68
LPCAT3-204ENST00000536797 SETD1BQ9UPS6 1966 aaKnown RBP31.78■■■□□ 2.68
LPCAT3-204ENST00000536797 PREX1Q8TCU6 1659 aa31.78■■■□□ 2.68
LPCAT3-204ENST00000536797 KANK1Q14678 1352 aa31.77■■■□□ 2.68
LPCAT3-204ENST00000536797 NPATQ14207 1427 aa31.77■■■□□ 2.68
LPCAT3-204ENST00000536797 LMTK3Q96Q04 1460 aa31.74■■■□□ 2.67
LPCAT3-204ENST00000536797 PZPP20742 1482 aa31.73■■■□□ 2.67
LPCAT3-204ENST00000536797 CAMSAP1Q5T5Y3 1602 aa31.72■■■□□ 2.67
LPCAT3-204ENST00000536797 VWDEQ8N2E2 1590 aa31.7■■■□□ 2.67
LPCAT3-204ENST00000536797 UHRF1BP1Q6BDS2 1440 aa31.7■■■□□ 2.67
LPCAT3-204ENST00000536797 GCC2Q8IWJ2 1684 aa31.7■■■□□ 2.66
LPCAT3-204ENST00000536797 UNC13BO14795 1591 aa31.69■■■□□ 2.66
LPCAT3-204ENST00000536797 LMTK2Q8IWU2 1503 aa31.67■■■□□ 2.66
LPCAT3-204ENST00000536797 NAIPQ13075 1403 aa31.66■■■□□ 2.66
LPCAT3-204ENST00000536797 HFM1A2PYH4 1435 aa31.65■■■□□ 2.66
LPCAT3-204ENST00000536797 FBXO31Q5XUX0 539 aaPredicted RBP31.64■■■□□ 2.66
LPCAT3-204ENST00000536797 ARHGAP31Q2M1Z3 1444 aa31.62■■■□□ 2.65
LPCAT3-204ENST00000536797 MYO3AQ8NEV4 1616 aa31.62■■■□□ 2.65
LPCAT3-204ENST00000536797 TNRQ92752 1358 aa31.59■■■□□ 2.65
LPCAT3-204ENST00000536797 EFCAB6Q5THR3 1501 aa31.58■■■□□ 2.65
LPCAT3-204ENST00000536797 CFAP65Q6ZU64 1925 aaKnown RBP31.57■■■□□ 2.65
LPCAT3-204ENST00000536797 SPATA31D1Q6ZQQ2 1576 aa31.57■■■□□ 2.64
LPCAT3-204ENST00000536797 ERVK-7P63135 1459 aa31.57■■■□□ 2.64
LPCAT3-204ENST00000536797 HSPA2P54652 639 aa31.57■■■□□ 2.64
LPCAT3-204ENST00000536797 IQGAP3Q86VI3 1631 aa31.56■■■□□ 2.64
LPCAT3-204ENST00000536797 TET3O43151 1660 aa31.55■■■□□ 2.64
LPCAT3-204ENST00000536797 ZNF142P52746 1687 aaPredicted RBP31.55■■■□□ 2.64
LPCAT3-204ENST00000536797 NUP155O75694 1391 aa31.55■■■□□ 2.64
LPCAT3-204ENST00000536797 CEP170BQ9Y4F5 1589 aaPredicted RBP31.53■■■□□ 2.64
LPCAT3-204ENST00000536797 NLRP1Q9C000 1473 aa31.49■■■□□ 2.63
LPCAT3-204ENST00000536797 A2ML1A8K2U0 1454 aa31.49■■■□□ 2.63
LPCAT3-204ENST00000536797 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
LPCAT3-204ENST00000536797 E9PCH4 1651 aa31.43■■■□□ 2.62
LPCAT3-204ENST00000536797 TRIM52Q96A61 297 aa31.41■■■□□ 2.62
LPCAT3-204ENST00000536797 NOS1P29475 1434 aa31.4■■■□□ 2.62
LPCAT3-204ENST00000536797 SETD5Q9C0A6 1442 aa31.39■■■□□ 2.62
LPCAT3-204ENST00000536797 UGGT1Q9NYU2 1555 aa31.38■■■□□ 2.61
LPCAT3-204ENST00000536797 SYNMO15061 1565 aa31.38■■■□□ 2.61
LPCAT3-204ENST00000536797 STRCQ7RTU9 1775 aa31.36■■■□□ 2.61
LPCAT3-204ENST00000536797 PLA2R1Q13018 1463 aa31.35■■■□□ 2.61
LPCAT3-204ENST00000536797 THEMISQ8N1K5 641 aaPredicted RBP31.32■■■□□ 2.61
LPCAT3-204ENST00000536797 UBR1Q8IWV7 1749 aa31.31■■■□□ 2.6
LPCAT3-204ENST00000536797 ACIN1Q9UKV3 1341 aaKnown RBP31.31■■■□□ 2.6
LPCAT3-204ENST00000536797 PIK3C2BO00750 1634 aa31.31■■■□□ 2.6
LPCAT3-204ENST00000536797 SLC52A1Q9NWF4 448 aa31.29■■■□□ 2.6
LPCAT3-204ENST00000536797 IDI1Q13907 227 aa31.28■■■□□ 2.6
LPCAT3-204ENST00000536797 RAB3GAP2Q9H2M9 1393 aa31.28■■■□□ 2.6
LPCAT3-204ENST00000536797 SLC4A1APQ9BWU0 796 aaKnown RBP31.27■■■□□ 2.6
LPCAT3-204ENST00000536797 SPHKAPQ2M3C7 1700 aa31.25■■■□□ 2.59
LPCAT3-204ENST00000536797 KDM5AP29375 1690 aaKnown RBP31.25■■■□□ 2.59
LPCAT3-204ENST00000536797 STAG3Q9UJ98 1225 aa31.25■■■□□ 2.59
LPCAT3-204ENST00000536797 DMRT2Q9Y5R5 561 aa31.25■■■□□ 2.59
LPCAT3-204ENST00000536797 PKD2Q13563 968 aa31.24■■■□□ 2.59
LPCAT3-204ENST00000536797 NCKAP5LQ9HCH0 1330 aa31.23■■■□□ 2.59
LPCAT3-204ENST00000536797 POLR1AO95602 1720 aaPredicted RBP31.22■■■□□ 2.59
LPCAT3-204ENST00000536797 ADGRB3O60242 1522 aa31.21■■■□□ 2.59
LPCAT3-204ENST00000536797 PTPRTO14522 1441 aa31.2■■■□□ 2.58
LPCAT3-204ENST00000536797 ANKLE2Q86XL3 938 aa31.18■■■□□ 2.58
LPCAT3-204ENST00000536797 MPHOSPH9Q99550 1183 aa31.16■■■□□ 2.58
LPCAT3-204ENST00000536797 SLIT1O75093 1534 aa31.16■■■□□ 2.58
LPCAT3-204ENST00000536797 TRPM2O94759 1503 aa31.15■■■□□ 2.58
LPCAT3-204ENST00000536797 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.58
LPCAT3-204ENST00000536797 HRCP23327 699 aa31.14■■■□□ 2.58
LPCAT3-204ENST00000536797 NEURL4Q96JN8 1562 aa31.13■■■□□ 2.57
LPCAT3-204ENST00000536797 TMEM131LA2VDJ0 1609 aa31.13■■■□□ 2.57
LPCAT3-204ENST00000536797 MYO5BQ9ULV0 1848 aa31.12■■■□□ 2.57
LPCAT3-204ENST00000536797 TMEM2Q9UHN6 1383 aa31.12■■■□□ 2.57
LPCAT3-204ENST00000536797 CHGAP10645 457 aaKnown RBP31.1■■■□□ 2.57
LPCAT3-204ENST00000536797 SCAF11Q99590 1463 aaKnown RBP31.08■■■□□ 2.57
LPCAT3-204ENST00000536797 EID1Q9Y6B2 187 aa31.08■■■□□ 2.57
LPCAT3-204ENST00000536797 CLTCL1P53675 1640 aa31.08■■■□□ 2.57
LPCAT3-204ENST00000536797 MED14O60244 1454 aa31.08■■■□□ 2.57
LPCAT3-204ENST00000536797 TRIM26Q12899 539 aaPredicted RBP31.07■■■□□ 2.57
LPCAT3-204ENST00000536797 FOXD1Q16676 465 aa31.07■■■□□ 2.57
LPCAT3-204ENST00000536797 TXNDC2Q86VQ3 553 aa31.07■■■□□ 2.56
LPCAT3-204ENST00000536797 NPHP4O75161 1426 aaPredicted RBP31.05■■■□□ 2.56
LPCAT3-204ENST00000536797 IQGAP1P46940 1657 aa31.04■■■□□ 2.56
LPCAT3-204ENST00000536797 LTKP29376 864 aa31.04■■■□□ 2.56
LPCAT3-204ENST00000536797 KIF1BO60333 1816 aa31.02■■■□□ 2.56
LPCAT3-204ENST00000536797 RIMS2Q9UQ26 1411 aa30.99■■■□□ 2.55
LPCAT3-204ENST00000536797 ZFYVE9O95405 1425 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms