RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 DNMT1P26358 1616 aaKnown RBP23.35■■□□□ 1.33
CDC27-209ENST00000532893 TNRQ92752 1358 aa23.35■■□□□ 1.33
CDC27-209ENST00000532893 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
CDC27-209ENST00000532893 FOXD1Q16676 465 aa23.34■■□□□ 1.33
CDC27-209ENST00000532893 ADGBQ8N7X0 1667 aa23.34■■□□□ 1.33
CDC27-209ENST00000532893 RTEL1-TNFRSF6BF6WH68 1400 aa23.33■■□□□ 1.33
CDC27-209ENST00000532893 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
CDC27-209ENST00000532893 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
CDC27-209ENST00000532893 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
CDC27-209ENST00000532893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
CDC27-209ENST00000532893 THEMISQ8N1K5 641 aaPredicted RBP23.29■■□□□ 1.32
CDC27-209ENST00000532893 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
CDC27-209ENST00000532893 CPS1P31327 1500 aa23.27■■□□□ 1.32
CDC27-209ENST00000532893 NEURL4Q96JN8 1562 aa23.25■■□□□ 1.31
CDC27-209ENST00000532893 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
CDC27-209ENST00000532893 PZPP20742 1482 aa23.24■■□□□ 1.31
CDC27-209ENST00000532893 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
CDC27-209ENST00000532893 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
CDC27-209ENST00000532893 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
CDC27-209ENST00000532893 EHBP1L1Q8N3D4 1523 aa23.21■■□□□ 1.31
CDC27-209ENST00000532893 KDM5DQ9BY66 1539 aa23.21■■□□□ 1.31
CDC27-209ENST00000532893 POLR1AO95602 1720 aaPredicted RBP23.2■■□□□ 1.3
CDC27-209ENST00000532893 CCDC141Q6ZP82 1450 aa23.19■■□□□ 1.3
CDC27-209ENST00000532893 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
CDC27-209ENST00000532893 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 UGGT1Q9NYU2 1555 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 FAM135AQ9P2D6 1515 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
CDC27-209ENST00000532893 MED14O60244 1454 aa23.15■■□□□ 1.3
CDC27-209ENST00000532893 CAMSAP2Q08AD1 1489 aa23.15■■□□□ 1.3
CDC27-209ENST00000532893 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
CDC27-209ENST00000532893 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
CDC27-209ENST00000532893 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
CDC27-209ENST00000532893 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
CDC27-209ENST00000532893 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
CDC27-209ENST00000532893 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
CDC27-209ENST00000532893 STRCP1A6NGW2 1772 aa23.02■■□□□ 1.28
CDC27-209ENST00000532893 ABCC3O15438 1527 aa23.02■■□□□ 1.28
CDC27-209ENST00000532893 ERVK-7P63135 1459 aa23■■□□□ 1.27
CDC27-209ENST00000532893 LTKP29376 864 aa23■■□□□ 1.27
CDC27-209ENST00000532893 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
CDC27-209ENST00000532893 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
CDC27-209ENST00000532893 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
CDC27-209ENST00000532893 CFAP65Q6ZU64 1925 aaKnown RBP22.96■■□□□ 1.27
CDC27-209ENST00000532893 SCAF11Q99590 1463 aaKnown RBP22.95■■□□□ 1.26
CDC27-209ENST00000532893 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
CDC27-209ENST00000532893 SYNMO15061 1565 aa22.93■■□□□ 1.26
CDC27-209ENST00000532893 ZC3H13Q5T200 1668 aaKnown RBP22.92■■□□□ 1.26
CDC27-209ENST00000532893 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
CDC27-209ENST00000532893 MAST1Q9Y2H9 1570 aa22.91■■□□□ 1.26
CDC27-209ENST00000532893 LRRC9Q6ZRR7 1453 aa22.91■■□□□ 1.26
CDC27-209ENST00000532893 UBR1Q8IWV7 1749 aa22.9■■□□□ 1.26
CDC27-209ENST00000532893 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
CDC27-209ENST00000532893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.252e-6■■□□□ 14.1
CDC27-209ENST00000532893 ARHGAP23Q9P227 1491 aa22.89■■□□□ 1.25
CDC27-209ENST00000532893 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
CDC27-209ENST00000532893 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
CDC27-209ENST00000532893 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
CDC27-209ENST00000532893 CEP152O94986 1710 aa22.87■■□□□ 1.25
CDC27-209ENST00000532893 SLIT1O75093 1534 aa22.87■■□□□ 1.25
CDC27-209ENST00000532893 DUOX2Q9NRD8 1548 aa22.85■■□□□ 1.25
CDC27-209ENST00000532893 ARHGAP31Q2M1Z3 1444 aa22.84■■□□□ 1.25
CDC27-209ENST00000532893 FAM135BQ49AJ0 1406 aa22.84■■□□□ 1.25
CDC27-209ENST00000532893 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
CDC27-209ENST00000532893 POTEAQ6S8J7 498 aa22.83■■□□□ 1.25
CDC27-209ENST00000532893 KIF15Q9NS87 1388 aa22.83■■□□□ 1.25
CDC27-209ENST00000532893 TMEM2Q9UHN6 1383 aa22.83■■□□□ 1.25
CDC27-209ENST00000532893 TMEM94Q12767 1356 aa22.82■■□□□ 1.24
CDC27-209ENST00000532893 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
CDC27-209ENST00000532893 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
CDC27-209ENST00000532893 KCNA6P17658 529 aa22.81■■□□□ 1.24
CDC27-209ENST00000532893 PROSER2Q86WR7 435 aaPredicted RBP22.81■■□□□ 1.24
CDC27-209ENST00000532893 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
CDC27-209ENST00000532893 IDI1Q13907 227 aa22.8■■□□□ 1.24
CDC27-209ENST00000532893 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
CDC27-209ENST00000532893 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
CDC27-209ENST00000532893 KANK1Q14678 1352 aa22.76■■□□□ 1.23
CDC27-209ENST00000532893 PIK3C2BO00750 1634 aa22.75■■□□□ 1.23
CDC27-209ENST00000532893 ABCC5O15440 1437 aa22.75■■□□□ 1.23
CDC27-209ENST00000532893 ERBINQ96RT1 1412 aa22.75■■□□□ 1.23
CDC27-209ENST00000532893 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
CDC27-209ENST00000532893 BCANQ96GW7 911 aa22.72■■□□□ 1.23
CDC27-209ENST00000532893 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
CDC27-209ENST00000532893 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
CDC27-209ENST00000532893 EFCAB6Q5THR3 1501 aa22.71■■□□□ 1.23
CDC27-209ENST00000532893 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
CDC27-209ENST00000532893 TET3O43151 1660 aa22.68■■□□□ 1.22
CDC27-209ENST00000532893 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
CDC27-209ENST00000532893 DAPK1P53355 1430 aa22.66■■□□□ 1.22
CDC27-209ENST00000532893 MSH6P52701 1360 aa22.65■■□□□ 1.22
CDC27-209ENST00000532893 SLC52A1Q9NWF4 448 aa22.65■■□□□ 1.22
CDC27-209ENST00000532893 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.22
CDC27-209ENST00000532893 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
CDC27-209ENST00000532893 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
CDC27-209ENST00000532893 NOS1P29475 1434 aa22.63■■□□□ 1.21
CDC27-209ENST00000532893 APLP2Q06481 763 aa22.62■■□□□ 1.21
CDC27-209ENST00000532893 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
CDC27-209ENST00000532893 CROCC2H7BZ55 1655 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms