RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SHANK2Q9UPX8 1470 aa32.18■■■□□ 2.74
HIPK3-205ENST00000531504 FAM135AQ9P2D6 1515 aa32.18■■■□□ 2.74
HIPK3-205ENST00000531504 PIP4K2BP78356 416 aa32.18■■■□□ 2.74
HIPK3-205ENST00000531504 TNRQ92752 1358 aa32.18■■■□□ 2.74
HIPK3-205ENST00000531504 TIAM1Q13009 1591 aa32.17■■■□□ 2.74
HIPK3-205ENST00000531504 DHX29Q7Z478 1369 aaKnown RBP32.15■■■□□ 2.74
HIPK3-205ENST00000531504 MBD5Q9P267 1494 aa32.15■■■□□ 2.74
HIPK3-205ENST00000531504 PZPP20742 1482 aa32.14■■■□□ 2.74
HIPK3-205ENST00000531504 KDM5DQ9BY66 1539 aa32.14■■■□□ 2.74
HIPK3-205ENST00000531504 EHBP1L1Q8N3D4 1523 aa32.11■■■□□ 2.73
HIPK3-205ENST00000531504 ZNF644Q9H582 1327 aaPredicted RBP32.11■■■□□ 2.73
HIPK3-205ENST00000531504 ANKLE2Q86XL3 938 aa32.08■■■□□ 2.73
HIPK3-205ENST00000531504 KIF3BO15066 747 aa32.07■■■□□ 2.72
HIPK3-205ENST00000531504 VWDEQ8N2E2 1590 aa32.07■■■□□ 2.72
HIPK3-205ENST00000531504 FBXO31Q5XUX0 539 aaPredicted RBP32.06■■■□□ 2.72
HIPK3-205ENST00000531504 NLRP1Q9C000 1473 aa32.05■■■□□ 2.72
HIPK3-205ENST00000531504 DEPDC5O75140 1603 aa32.04■■■□□ 2.72
HIPK3-205ENST00000531504 THEMISQ8N1K5 641 aaPredicted RBP32.04■■■□□ 2.72
HIPK3-205ENST00000531504 CCDC141Q6ZP82 1450 aa32.03■■■□□ 2.72
HIPK3-205ENST00000531504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.03■■■□□ 2.725e-8■□□□□ 8.8
HIPK3-205ENST00000531504 UGGT1Q9NYU2 1555 aa32.02■■■□□ 2.72
HIPK3-205ENST00000531504 WASHC2CQ9Y4E1 1318 aa32.02■■■□□ 2.72
HIPK3-205ENST00000531504 PHF23Q9BUL5 403 aaPredicted RBP32.02■■■□□ 2.72
HIPK3-205ENST00000531504 MED14O60244 1454 aa32.02■■■□□ 2.72
HIPK3-205ENST00000531504 CEP162Q5TB80 1403 aa32.01■■■□□ 2.72
HIPK3-205ENST00000531504 NPHP4O75161 1426 aaPredicted RBP32■■■□□ 2.71
HIPK3-205ENST00000531504 MIA2Q96PC5 1412 aa32■■■□□ 2.71
HIPK3-205ENST00000531504 IQGAP1P46940 1657 aa31.99■■■□□ 2.71
HIPK3-205ENST00000531504 RSPH4AQ5TD94 716 aa31.95■■■□□ 2.71
HIPK3-205ENST00000531504 ALKQ9UM73 1620 aa31.95■■■□□ 2.71
HIPK3-205ENST00000531504 CAMSAP2Q08AD1 1489 aa31.94■■■□□ 2.7
HIPK3-205ENST00000531504 SYNMO15061 1565 aa31.92■■■□□ 2.7
HIPK3-205ENST00000531504 RNF17Q9BXT8 1623 aaKnown RBP31.91■■■□□ 2.7
HIPK3-205ENST00000531504 ZC3H13Q5T200 1668 aaKnown RBP31.89■■■□□ 2.7
HIPK3-205ENST00000531504 ARHGEF5Q12774 1597 aa31.87■■■□□ 2.69
HIPK3-205ENST00000531504 NCOA2Q15596 1464 aa31.86■■■□□ 2.69
HIPK3-205ENST00000531504 LRRC7Q96NW7 1537 aa31.85■■■□□ 2.69
HIPK3-205ENST00000531504 STRCP1A6NGW2 1772 aa31.85■■■□□ 2.69
HIPK3-205ENST00000531504 TSPY4P0CV99 314 aa31.82■■■□□ 2.68
HIPK3-205ENST00000531504 TSPY10P0CW01 314 aa31.82■■■□□ 2.68
HIPK3-205ENST00000531504 ABCC3O15438 1527 aa31.8■■■□□ 2.68
HIPK3-205ENST00000531504 EIF2AK4Q9P2K8 1649 aaKnown RBP31.77■■■□□ 2.68
HIPK3-205ENST00000531504 ERVK-7P63135 1459 aa31.77■■■□□ 2.68
HIPK3-205ENST00000531504 SENP3Q9H4L4 574 aaPredicted RBP31.76■■■□□ 2.67
HIPK3-205ENST00000531504 UBR1Q8IWV7 1749 aa31.73■■■□□ 2.67
HIPK3-205ENST00000531504 MAST1Q9Y2H9 1570 aa31.73■■■□□ 2.67
HIPK3-205ENST00000531504 SCAF11Q99590 1463 aaKnown RBP31.71■■■□□ 2.67
HIPK3-205ENST00000531504 CEP152O94986 1710 aa31.68■■■□□ 2.66
HIPK3-205ENST00000531504 MROH1Q8NDA8 1641 aa31.66■■■□□ 2.66
HIPK3-205ENST00000531504 CFAP65Q6ZU64 1925 aaKnown RBP31.65■■■□□ 2.66
HIPK3-205ENST00000531504 SLIT1O75093 1534 aa31.63■■■□□ 2.65
HIPK3-205ENST00000531504 ARHGAP23Q9P227 1491 aa31.61■■■□□ 2.65
HIPK3-205ENST00000531504 XIRP1Q702N8 1843 aaKnown RBP31.61■■■□□ 2.65
HIPK3-205ENST00000531504 TXNDC2Q86VQ3 553 aa31.58■■■□□ 2.65
HIPK3-205ENST00000531504 DUOX2Q9NRD8 1548 aa31.57■■■□□ 2.64
HIPK3-205ENST00000531504 RGS17Q9UGC6 210 aaPredicted RBP31.56■■■□□ 2.64
HIPK3-205ENST00000531504 EID1Q9Y6B2 187 aa31.56■■■□□ 2.64
HIPK3-205ENST00000531504 LTKP29376 864 aa31.54■■■□□ 2.64
HIPK3-205ENST00000531504 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
HIPK3-205ENST00000531504 ARHGAP31Q2M1Z3 1444 aa31.53■■■□□ 2.64
HIPK3-205ENST00000531504 FAM135BQ49AJ0 1406 aa31.52■■■□□ 2.64
HIPK3-205ENST00000531504 PRDM15P57071 1507 aaPredicted RBP31.52■■■□□ 2.64
HIPK3-205ENST00000531504 PIK3C2BO00750 1634 aa31.49■■■□□ 2.63
HIPK3-205ENST00000531504 MYOM3Q5VTT5 1437 aa31.48■■■□□ 2.63
HIPK3-205ENST00000531504 KDM5AP29375 1690 aaKnown RBP31.46■■■□□ 2.63
HIPK3-205ENST00000531504 TMEM2Q9UHN6 1383 aa31.45■■■□□ 2.63
HIPK3-205ENST00000531504 ERBINQ96RT1 1412 aa31.44■■■□□ 2.62
HIPK3-205ENST00000531504 STAG3Q9UJ98 1225 aa31.43■■■□□ 2.62
HIPK3-205ENST00000531504 ROBO1Q9Y6N7 1651 aa31.43■■■□□ 2.62
HIPK3-205ENST00000531504 TMEM94Q12767 1356 aa31.42■■■□□ 2.62
HIPK3-205ENST00000531504 KIF15Q9NS87 1388 aa31.42■■■□□ 2.62
HIPK3-205ENST00000531504 EFCAB6Q5THR3 1501 aa31.4■■■□□ 2.62
HIPK3-205ENST00000531504 VPS8Q8N3P4 1428 aa31.4■■■□□ 2.62
HIPK3-205ENST00000531504 CROCC2H7BZ55 1655 aa31.39■■■□□ 2.62
HIPK3-205ENST00000531504 POTEAQ6S8J7 498 aa31.37■■■□□ 2.61
HIPK3-205ENST00000531504 KANK1Q14678 1352 aa31.37■■■□□ 2.61
HIPK3-205ENST00000531504 MAP3K1Q13233 1512 aa31.36■■■□□ 2.61
HIPK3-205ENST00000531504 KCNA6P17658 529 aa31.36■■■□□ 2.61
HIPK3-205ENST00000531504 NKTRP30414 1462 aaKnown RBP31.33■■■□□ 2.61
HIPK3-205ENST00000531504 PROSER2Q86WR7 435 aaPredicted RBP31.33■■■□□ 2.61
HIPK3-205ENST00000531504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.33■■■□□ 2.61
HIPK3-205ENST00000531504 TET3O43151 1660 aa31.31■■■□□ 2.6
HIPK3-205ENST00000531504 NWD1Q149M9 1564 aa31.3■■■□□ 2.6
HIPK3-205ENST00000531504 RRP7BPQ9NSQ0 103 aa31.3■■■□□ 2.6
HIPK3-205ENST00000531504 KANK4Q5T7N3 995 aaPredicted RBP31.28■■■□□ 2.6
HIPK3-205ENST00000531504 LMTK2Q8IWU2 1503 aa31.28■■■□□ 2.6
HIPK3-205ENST00000531504 MSH6P52701 1360 aa31.28■■■□□ 2.6
HIPK3-205ENST00000531504 ABCC5O15440 1437 aa31.27■■■□□ 2.6
HIPK3-205ENST00000531504 SLC26A8Q96RN1 970 aa31.27■■■□□ 2.6
HIPK3-205ENST00000531504 PHLPP1O60346 1717 aa31.27■■■□□ 2.6
HIPK3-205ENST00000531504 ADGRB3O60242 1522 aa31.26■■■□□ 2.59
HIPK3-205ENST00000531504 IDI1Q13907 227 aa31.26■■■□□ 2.59
HIPK3-205ENST00000531504 PTPN23Q9H3S7 1636 aa31.24■■■□□ 2.59
HIPK3-205ENST00000531504 SETD1AO15047 1707 aaKnown RBP31.24■■■□□ 2.59
HIPK3-205ENST00000531504 RBM33Q96EV2 1170 aaKnown RBP31.22■■■□□ 2.59
HIPK3-205ENST00000531504 JCADQ9P266 1359 aa31.21■■■□□ 2.59
HIPK3-205ENST00000531504 DAPK1P53355 1430 aa31.21■■■□□ 2.59
HIPK3-205ENST00000531504 NOS1P29475 1434 aa31.18■■■□□ 2.58
HIPK3-205ENST00000531504 BCANQ96GW7 911 aa31.18■■■□□ 2.58
HIPK3-205ENST00000531504 SLAIN2Q9P270 581 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms