RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SLC4A1APQ9BWU0 796 aaKnown RBP36.46■■■■□ 3.43
LDLRAD3-203ENST00000528989 SIGLEC1Q9BZZ2 1709 aa36.46■■■■□ 3.43
LDLRAD3-203ENST00000528989 EIF2AK4Q9P2K8 1649 aaKnown RBP36.45■■■■□ 3.43
LDLRAD3-203ENST00000528989 PZPP20742 1482 aa36.44■■■■□ 3.42
LDLRAD3-203ENST00000528989 ACIN1Q9UKV3 1341 aaKnown RBP36.44■■■■□ 3.42
LDLRAD3-203ENST00000528989 UNC13BO14795 1591 aa36.43■■■■□ 3.42
LDLRAD3-203ENST00000528989 REREQ9P2R6 1566 aa36.42■■■■□ 3.42
LDLRAD3-203ENST00000528989 FOXD1Q16676 465 aa36.41■■■■□ 3.42
LDLRAD3-203ENST00000528989 ARID4BQ4LE39 1312 aaPredicted RBP36.39■■■■□ 3.42
LDLRAD3-203ENST00000528989 MROH1Q8NDA8 1641 aa36.38■■■■□ 3.41
LDLRAD3-203ENST00000528989 MLECQ14165 292 aa36.38■■■■□ 3.41
LDLRAD3-203ENST00000528989 DEPDC5O75140 1603 aa36.38■■■■□ 3.41
LDLRAD3-203ENST00000528989 KDM5DQ9BY66 1539 aa36.36■■■■□ 3.41
LDLRAD3-203ENST00000528989 FAM135AQ9P2D6 1515 aa36.36■■■■□ 3.41
LDLRAD3-203ENST00000528989 AGLP35573 1532 aa36.36■■■■□ 3.41
LDLRAD3-203ENST00000528989 PKD2Q13563 968 aa36.35■■■■□ 3.41
LDLRAD3-203ENST00000528989 BCORL1Q5H9F3 1711 aa36.34■■■■□ 3.41
LDLRAD3-203ENST00000528989 RNF17Q9BXT8 1623 aaKnown RBP36.34■■■■□ 3.41
LDLRAD3-203ENST00000528989 PRDM15P57071 1507 aaPredicted RBP36.32■■■■□ 3.41
LDLRAD3-203ENST00000528989 KANK1Q14678 1352 aa36.32■■■■□ 3.4
LDLRAD3-203ENST00000528989 IQGAP3Q86VI3 1631 aa36.29■■■■□ 3.4
LDLRAD3-203ENST00000528989 WASHC2CQ9Y4E1 1318 aa36.29■■■■□ 3.4
LDLRAD3-203ENST00000528989 VWDEQ8N2E2 1590 aa36.28■■■■□ 3.4
LDLRAD3-203ENST00000528989 SIN3AQ96ST3 1273 aa36.19■■■■□ 3.38
LDLRAD3-203ENST00000528989 ABCC3O15438 1527 aa36.18■■■■□ 3.38
LDLRAD3-203ENST00000528989 CEP152O94986 1710 aa36.15■■■■□ 3.38
LDLRAD3-203ENST00000528989 CLSPNQ9HAW4 1339 aa36.15■■■■□ 3.38
LDLRAD3-203ENST00000528989 PPP6R1Q9UPN7 881 aa36.14■■■■□ 3.38
LDLRAD3-203ENST00000528989 ANKRD30BQ9BXX2 1392 aa36.14■■■■□ 3.38
LDLRAD3-203ENST00000528989 LMTK2Q8IWU2 1503 aa36.14■■■■□ 3.38
LDLRAD3-203ENST00000528989 NEUROD1Q13562 356 aa36.11■■■■□ 3.37
LDLRAD3-203ENST00000528989 TET3O43151 1660 aa36.1■■■■□ 3.37
LDLRAD3-203ENST00000528989 E9PCH4 1651 aa36.08■■■■□ 3.37
LDLRAD3-203ENST00000528989 EFCAB6Q5THR3 1501 aa36.07■■■■□ 3.36
LDLRAD3-203ENST00000528989 ESF1Q9H501 851 aaKnown RBP36.07■■■■□ 3.36
LDLRAD3-203ENST00000528989 NPATQ14207 1427 aa36.06■■■■□ 3.36
LDLRAD3-203ENST00000528989 PLA2R1Q13018 1463 aa36.04■■■■□ 3.36
LDLRAD3-203ENST00000528989 CLTCQ00610 1675 aaKnown RBP36.02■■■■□ 3.36
LDLRAD3-203ENST00000528989 CAMSAP1Q5T5Y3 1602 aa36.01■■■■□ 3.36
LDLRAD3-203ENST00000528989 ZC3H13Q5T200 1668 aaKnown RBP36.01■■■■□ 3.36
LDLRAD3-203ENST00000528989 FBXO31Q5XUX0 539 aaPredicted RBP35.99■■■■□ 3.35
LDLRAD3-203ENST00000528989 ZMYM3Q14202 1370 aa35.98■■■■□ 3.35
LDLRAD3-203ENST00000528989 ARHGAP31Q2M1Z3 1444 aa35.96■■■■□ 3.35
LDLRAD3-203ENST00000528989 CFAP65Q6ZU64 1925 aaKnown RBP35.95■■■■□ 3.35
LDLRAD3-203ENST00000528989 PTPRTO14522 1441 aa35.95■■■■□ 3.34
LDLRAD3-203ENST00000528989 RPRD2Q5VT52 1461 aaKnown RBP35.94■■■■□ 3.34
LDLRAD3-203ENST00000528989 CEBPAP49715 358 aaPredicted RBP35.91■■■■□ 3.34
LDLRAD3-203ENST00000528989 CNTLNQ9NXG0 1405 aa35.89■■■■□ 3.34
LDLRAD3-203ENST00000528989 PLPPR3Q6T4P5 718 aa35.88■■■■□ 3.33
LDLRAD3-203ENST00000528989 CCDC144AA2RUR9 1427 aa35.88■■■■□ 3.33
LDLRAD3-203ENST00000528989 NOS1P29475 1434 aa35.85■■■■□ 3.33
LDLRAD3-203ENST00000528989 SPHKAPQ2M3C7 1700 aa35.85■■■■□ 3.33
LDLRAD3-203ENST00000528989 FER1L4A9Z1Z3 1794 aa35.85■■■■□ 3.33
LDLRAD3-203ENST00000528989 UGGT1Q9NYU2 1555 aa35.84■■■■□ 3.33
LDLRAD3-203ENST00000528989 TRPM2O94759 1503 aa35.84■■■■□ 3.33
LDLRAD3-203ENST00000528989 MADDQ8WXG6 1647 aa35.84■■■■□ 3.33
LDLRAD3-203ENST00000528989 ZEB1P37275 1124 aaPredicted RBP35.82■■■■□ 3.32
LDLRAD3-203ENST00000528989 ADAMTSL3P82987 1691 aa35.81■■■■□ 3.32
LDLRAD3-203ENST00000528989 ERVK-7P63135 1459 aa35.8■■■■□ 3.32
LDLRAD3-203ENST00000528989 PREX1Q8TCU6 1659 aa35.77■■■■□ 3.32
LDLRAD3-203ENST00000528989 SYNMO15061 1565 aa35.77■■■■□ 3.32
LDLRAD3-203ENST00000528989 CLTCL1P53675 1640 aa35.76■■■■□ 3.32
LDLRAD3-203ENST00000528989 TONSLQ96HA7 1378 aa35.76■■■■□ 3.31
LDLRAD3-203ENST00000528989 IDI1Q13907 227 aa35.75■■■■□ 3.31
LDLRAD3-203ENST00000528989 RGL3Q3MIN7 710 aa35.75■■■■□ 3.31
LDLRAD3-203ENST00000528989 MROH2AA6NES4 1674 aa35.75■■■■□ 3.31
LDLRAD3-203ENST00000528989 L3MBTL2Q969R5 705 aa35.74■■■■□ 3.31
LDLRAD3-203ENST00000528989 RIMS1Q86UR5 1692 aaKnown RBP35.74■■■■□ 3.31
LDLRAD3-203ENST00000528989 C3P01024 1663 aa35.71■■■■□ 3.31
LDLRAD3-203ENST00000528989 SPATA31D1Q6ZQQ2 1576 aa35.71■■■■□ 3.31
LDLRAD3-203ENST00000528989 SLC52A1Q9NWF4 448 aa35.69■■■■□ 3.3
LDLRAD3-203ENST00000528989 CHGAP10645 457 aaKnown RBP35.69■■■■□ 3.3
LDLRAD3-203ENST00000528989 TIMELESSQ9UNS1 1208 aa35.68■■■■□ 3.3
LDLRAD3-203ENST00000528989 KDM4FA0A1W2PPD8 638 aa35.66■■■■□ 3.3
LDLRAD3-203ENST00000528989 TNRQ92752 1358 aa35.65■■■■□ 3.3
LDLRAD3-203ENST00000528989 SPATA31E1Q6ZUB1 1445 aa35.65■■■■□ 3.3
LDLRAD3-203ENST00000528989 PIK3C2BO00750 1634 aa35.62■■■■□ 3.29
LDLRAD3-203ENST00000528989 PPP1R15AO75807 674 aaPredicted RBP35.6■■■■□ 3.29
LDLRAD3-203ENST00000528989 DCAF11Q8TEB1 546 aa35.6■■■■□ 3.29
LDLRAD3-203ENST00000528989 PTPRMP28827 1452 aa35.6■■■■□ 3.29
LDLRAD3-203ENST00000528989 KDM2AQ9Y2K7 1162 aa35.58■■■■□ 3.29
LDLRAD3-203ENST00000528989 ZNF326Q5BKZ1 582 aaKnown RBP35.55■■■■□ 3.28
LDLRAD3-203ENST00000528989 STAG3Q9UJ98 1225 aa35.54■■■■□ 3.28
LDLRAD3-203ENST00000528989 KIF1BO60333 1816 aa35.52■■■■□ 3.28
LDLRAD3-203ENST00000528989 ADGRB3O60242 1522 aa35.51■■■■□ 3.28
LDLRAD3-203ENST00000528989 TMEM131LA2VDJ0 1609 aa35.47■■■■□ 3.27
LDLRAD3-203ENST00000528989 NBPF8Q3BBV2 869 aa35.47■■■■□ 3.27
LDLRAD3-203ENST00000528989 NUTM2DQ5VT03 806 aaPredicted RBP35.46■■■■□ 3.27
LDLRAD3-203ENST00000528989 NEURL4Q96JN8 1562 aa35.44■■■■□ 3.26
LDLRAD3-203ENST00000528989 NLRP1Q9C000 1473 aa35.44■■■■□ 3.26
LDLRAD3-203ENST00000528989 A2ML1A8K2U0 1454 aa35.43■■■■□ 3.26
LDLRAD3-203ENST00000528989 MYO5BQ9ULV0 1848 aa35.41■■■■□ 3.26
LDLRAD3-203ENST00000528989 RPGRIP1LQ68CZ1 1315 aa35.37■■■■□ 3.25
LDLRAD3-203ENST00000528989 ADGRF5Q8IZF2 1346 aa35.36■■■■□ 3.25
LDLRAD3-203ENST00000528989 MYO3AQ8NEV4 1616 aa35.36■■■■□ 3.25
LDLRAD3-203ENST00000528989 SENP3Q9H4L4 574 aaPredicted RBP35.33■■■■□ 3.25
LDLRAD3-203ENST00000528989 UBR1Q8IWV7 1749 aa35.32■■■■□ 3.24
LDLRAD3-203ENST00000528989 SETD1BQ9UPS6 1966 aaKnown RBP35.32■■■■□ 3.24
LDLRAD3-203ENST00000528989 NEXMIFQ5QGS0 1516 aa35.31■■■■□ 3.24
LDLRAD3-203ENST00000528989 UHRF1BP1Q6BDS2 1440 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms