RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 KIF3BO15066 747 aa19.91■□□□□ 0.78
SRPRA-202ENST00000527817 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
SRPRA-202ENST00000527817 TNRQ92752 1358 aa19.91■□□□□ 0.78
SRPRA-202ENST00000527817 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
SRPRA-202ENST00000527817 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
SRPRA-202ENST00000527817 SHANK2Q9UPX8 1470 aa19.9■□□□□ 0.78
SRPRA-202ENST00000527817 CPS1P31327 1500 aa19.9■□□□□ 0.78
SRPRA-202ENST00000527817 RSPH4AQ5TD94 716 aa19.89■□□□□ 0.77
SRPRA-202ENST00000527817 WASHC2CQ9Y4E1 1318 aa19.87■□□□□ 0.77
SRPRA-202ENST00000527817 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
SRPRA-202ENST00000527817 PZPP20742 1482 aa19.86■□□□□ 0.77
SRPRA-202ENST00000527817 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
SRPRA-202ENST00000527817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.85■□□□□ 0.77
SRPRA-202ENST00000527817 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
SRPRA-202ENST00000527817 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
SRPRA-202ENST00000527817 FAM135AQ9P2D6 1515 aa19.84■□□□□ 0.77
SRPRA-202ENST00000527817 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
SRPRA-202ENST00000527817 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
SRPRA-202ENST00000527817 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
SRPRA-202ENST00000527817 MED14O60244 1454 aa19.81■□□□□ 0.76
SRPRA-202ENST00000527817 EHBP1L1Q8N3D4 1523 aa19.81■□□□□ 0.76
SRPRA-202ENST00000527817 NLRP1Q9C000 1473 aa19.8■□□□□ 0.76
SRPRA-202ENST00000527817 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
SRPRA-202ENST00000527817 VWDEQ8N2E2 1590 aa19.79■□□□□ 0.76
SRPRA-202ENST00000527817 NPHP4O75161 1426 aaPredicted RBP19.79■□□□□ 0.76
SRPRA-202ENST00000527817 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
SRPRA-202ENST00000527817 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
SRPRA-202ENST00000527817 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
SRPRA-202ENST00000527817 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
SRPRA-202ENST00000527817 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
SRPRA-202ENST00000527817 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
SRPRA-202ENST00000527817 CAMSAP2Q08AD1 1489 aa19.73■□□□□ 0.75
SRPRA-202ENST00000527817 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
SRPRA-202ENST00000527817 LRRC7Q96NW7 1537 aa19.7■□□□□ 0.74
SRPRA-202ENST00000527817 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
SRPRA-202ENST00000527817 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
SRPRA-202ENST00000527817 STRCP1A6NGW2 1772 aa19.65■□□□□ 0.74
SRPRA-202ENST00000527817 ABCC3O15438 1527 aa19.64■□□□□ 0.73
SRPRA-202ENST00000527817 RNF17Q9BXT8 1623 aaKnown RBP19.63■□□□□ 0.73
SRPRA-202ENST00000527817 ERVK-7P63135 1459 aa19.63■□□□□ 0.73
SRPRA-202ENST00000527817 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
SRPRA-202ENST00000527817 LTKP29376 864 aa19.62■□□□□ 0.73
SRPRA-202ENST00000527817 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
SRPRA-202ENST00000527817 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
SRPRA-202ENST00000527817 RGS17Q9UGC6 210 aaPredicted RBP19.6■□□□□ 0.73
SRPRA-202ENST00000527817 SYNMO15061 1565 aa19.59■□□□□ 0.73
SRPRA-202ENST00000527817 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
SRPRA-202ENST00000527817 SCAF11Q99590 1463 aaKnown RBP19.59■□□□□ 0.73
SRPRA-202ENST00000527817 CFAP65Q6ZU64 1925 aaKnown RBP19.59■□□□□ 0.73
SRPRA-202ENST00000527817 ARHGAP23Q9P227 1491 aa19.57■□□□□ 0.72
SRPRA-202ENST00000527817 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
SRPRA-202ENST00000527817 EIF2AK4Q9P2K8 1649 aaKnown RBP19.57■□□□□ 0.72
SRPRA-202ENST00000527817 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
SRPRA-202ENST00000527817 SLIT1O75093 1534 aa19.56■□□□□ 0.72
SRPRA-202ENST00000527817 ARHGAP31Q2M1Z3 1444 aa19.55■□□□□ 0.72
SRPRA-202ENST00000527817 MROH1Q8NDA8 1641 aa19.54■□□□□ 0.72
SRPRA-202ENST00000527817 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
SRPRA-202ENST00000527817 FAM135BQ49AJ0 1406 aa19.54■□□□□ 0.72
SRPRA-202ENST00000527817 MYOM3Q5VTT5 1437 aa19.51■□□□□ 0.71
SRPRA-202ENST00000527817 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
SRPRA-202ENST00000527817 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
SRPRA-202ENST00000527817 CEP152O94986 1710 aa19.5■□□□□ 0.71
SRPRA-202ENST00000527817 TMEM2Q9UHN6 1383 aa19.49■□□□□ 0.71
SRPRA-202ENST00000527817 KCNA6P17658 529 aa19.49■□□□□ 0.71
SRPRA-202ENST00000527817 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
SRPRA-202ENST00000527817 POTEAQ6S8J7 498 aa19.47■□□□□ 0.71
SRPRA-202ENST00000527817 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
SRPRA-202ENST00000527817 IDI1Q13907 227 aa19.46■□□□□ 0.71
SRPRA-202ENST00000527817 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
SRPRA-202ENST00000527817 TMEM94Q12767 1356 aa19.45■□□□□ 0.7
SRPRA-202ENST00000527817 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
SRPRA-202ENST00000527817 VPS8Q8N3P4 1428 aa19.45■□□□□ 0.7
SRPRA-202ENST00000527817 PROSER2Q86WR7 435 aaPredicted RBP19.45■□□□□ 0.7
SRPRA-202ENST00000527817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.73e-6■■□□□ 11.7
SRPRA-202ENST00000527817 MAP3K1Q13233 1512 aa19.45■□□□□ 0.7
SRPRA-202ENST00000527817 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
SRPRA-202ENST00000527817 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
SRPRA-202ENST00000527817 KANK1Q14678 1352 aa19.43■□□□□ 0.7
SRPRA-202ENST00000527817 PIK3C2BO00750 1634 aa19.41■□□□□ 0.7
SRPRA-202ENST00000527817 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
SRPRA-202ENST00000527817 ABCC5O15440 1437 aa19.41■□□□□ 0.7
SRPRA-202ENST00000527817 TET3O43151 1660 aa19.4■□□□□ 0.7
SRPRA-202ENST00000527817 KDM5AP29375 1690 aaKnown RBP19.39■□□□□ 0.69
SRPRA-202ENST00000527817 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
SRPRA-202ENST00000527817 RBM33Q96EV2 1170 aaKnown RBP19.37■□□□□ 0.69
SRPRA-202ENST00000527817 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
SRPRA-202ENST00000527817 SLAIN2Q9P270 581 aa19.37■□□□□ 0.69
SRPRA-202ENST00000527817 LMTK2Q8IWU2 1503 aa19.35■□□□□ 0.69
SRPRA-202ENST00000527817 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
SRPRA-202ENST00000527817 ROBO1Q9Y6N7 1651 aa19.35■□□□□ 0.69
SRPRA-202ENST00000527817 NOS1P29475 1434 aa19.34■□□□□ 0.69
SRPRA-202ENST00000527817 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
SRPRA-202ENST00000527817 DAPK1P53355 1430 aa19.33■□□□□ 0.68
SRPRA-202ENST00000527817 MSH6P52701 1360 aa19.32■□□□□ 0.68
SRPRA-202ENST00000527817 BCANQ96GW7 911 aa19.32■□□□□ 0.68
SRPRA-202ENST00000527817 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
SRPRA-202ENST00000527817 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
SRPRA-202ENST00000527817 JCADQ9P266 1359 aa19.31■□□□□ 0.68
SRPRA-202ENST00000527817 HDGFP51858 240 aaKnown RBP19.3■□□□□ 0.68
SRPRA-202ENST00000527817 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms