RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
CAPN1-210ENST00000527699 CFDP1Q9UEE9 299 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-210ENST00000527699 GPATCH8Q9UKJ3 1502 aaKnown RBP16■□□□□ 0.15
CAPN1-210ENST00000527699 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
CAPN1-210ENST00000527699 ZNF644Q9H582 1327 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-210ENST00000527699 GGT6Q6P531 493 aa15.99■□□□□ 0.15
CAPN1-210ENST00000527699 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
CAPN1-210ENST00000527699 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
CAPN1-210ENST00000527699 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-210ENST00000527699 SYNMO15061 1565 aa15.96■□□□□ 0.14
CAPN1-210ENST00000527699 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
CAPN1-210ENST00000527699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
CAPN1-210ENST00000527699 ATP7AQ04656 1500 aa15.93■□□□□ 0.14
CAPN1-210ENST00000527699 MEX3CQ5U5Q3 659 aaKnown RBP15.92■□□□□ 0.14
CAPN1-210ENST00000527699 A2MP01023 1474 aa15.91■□□□□ 0.14
CAPN1-210ENST00000527699 IQGAP1P46940 1657 aa15.91■□□□□ 0.14
CAPN1-210ENST00000527699 ZNF772Q68DY9 489 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-210ENST00000527699 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-210ENST00000527699 TNRQ92752 1358 aa15.87■□□□□ 0.13
CAPN1-210ENST00000527699 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
CAPN1-210ENST00000527699 INO80Q9ULG1 1556 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-210ENST00000527699 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
CAPN1-210ENST00000527699 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
CAPN1-210ENST00000527699 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
CAPN1-210ENST00000527699 RXRBP28702 533 aa15.86■□□□□ 0.13
CAPN1-210ENST00000527699 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
CAPN1-210ENST00000527699 FOXD1Q16676 465 aa15.85■□□□□ 0.13
CAPN1-210ENST00000527699 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
CAPN1-210ENST00000527699 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
CAPN1-210ENST00000527699 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
CAPN1-210ENST00000527699 MED14O60244 1454 aa15.84■□□□□ 0.13
CAPN1-210ENST00000527699 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-210ENST00000527699 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
CAPN1-210ENST00000527699 PLXNC1O60486 1568 aa15.83■□□□□ 0.13
CAPN1-210ENST00000527699 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
CAPN1-210ENST00000527699 KIF3BO15066 747 aa15.83■□□□□ 0.12
CAPN1-210ENST00000527699 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
CAPN1-210ENST00000527699 JCADQ9P266 1359 aa15.82■□□□□ 0.12
CAPN1-210ENST00000527699 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
CAPN1-210ENST00000527699 UGGT1Q9NYU2 1555 aa15.82■□□□□ 0.12
CAPN1-210ENST00000527699 XIRP1Q702N8 1843 aaKnown RBP15.8■□□□□ 0.12
CAPN1-210ENST00000527699 PHLPP1O60346 1717 aa15.8■□□□□ 0.12
CAPN1-210ENST00000527699 RBM33Q96EV2 1170 aaKnown RBP15.8■□□□□ 0.12
CAPN1-210ENST00000527699 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
CAPN1-210ENST00000527699 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-210ENST00000527699 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-210ENST00000527699 NUTM2DQ5VT03 806 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-210ENST00000527699 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-210ENST00000527699 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
CAPN1-210ENST00000527699 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
CAPN1-210ENST00000527699 SETBP1Q9Y6X0 1596 aa15.78■□□□□ 0.12
CAPN1-210ENST00000527699 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
CAPN1-210ENST00000527699 WASHC2CQ9Y4E1 1318 aa15.75■□□□□ 0.11
CAPN1-210ENST00000527699 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
CAPN1-210ENST00000527699 LRP6O75581 1613 aa15.74■□□□□ 0.11
CAPN1-210ENST00000527699 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
CAPN1-210ENST00000527699 CDK12Q9NYV4 1490 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-210ENST00000527699 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
CAPN1-210ENST00000527699 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
CAPN1-210ENST00000527699 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
CAPN1-210ENST00000527699 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-210ENST00000527699 ZC3H13Q5T200 1668 aaKnown RBP15.71■□□□□ 0.11
CAPN1-210ENST00000527699 PZPP20742 1482 aa15.71■□□□□ 0.1
CAPN1-210ENST00000527699 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
CAPN1-210ENST00000527699 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
CAPN1-210ENST00000527699 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
CAPN1-210ENST00000527699 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
CAPN1-210ENST00000527699 KDM5DQ9BY66 1539 aa15.69■□□□□ 0.1
CAPN1-210ENST00000527699 RGS12O14924 1447 aa15.67■□□□□ 0.1
CAPN1-210ENST00000527699 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
CAPN1-210ENST00000527699 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-210ENST00000527699 AFF2P51816 1311 aa15.65■□□□□ 0.1
CAPN1-210ENST00000527699 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
CAPN1-210ENST00000527699 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
CAPN1-210ENST00000527699 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
CAPN1-210ENST00000527699 ARHGEF5Q12774 1597 aa15.63■□□□□ 0.09
CAPN1-210ENST00000527699 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
CAPN1-210ENST00000527699 COL16A1Q07092 1604 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-210ENST00000527699 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
CAPN1-210ENST00000527699 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
CAPN1-210ENST00000527699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
CAPN1-210ENST00000527699 MSH6P52701 1360 aa15.62■□□□□ 0.09
CAPN1-210ENST00000527699 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
CAPN1-210ENST00000527699 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
CAPN1-210ENST00000527699 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
CAPN1-210ENST00000527699 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
CAPN1-210ENST00000527699 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
CAPN1-210ENST00000527699 ABCC3O15438 1527 aa15.58■□□□□ 0.09
CAPN1-210ENST00000527699 LTKP29376 864 aa15.58■□□□□ 0.08
CAPN1-210ENST00000527699 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
CAPN1-210ENST00000527699 EID1Q9Y6B2 187 aa15.58■□□□□ 0.08
CAPN1-210ENST00000527699 CFAP65Q6ZU64 1925 aaKnown RBP15.58■□□□□ 0.08
CAPN1-210ENST00000527699 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.08
CAPN1-210ENST00000527699 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
CAPN1-210ENST00000527699 CEP152O94986 1710 aa15.57■□□□□ 0.08
CAPN1-210ENST00000527699 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
CAPN1-210ENST00000527699 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
CAPN1-210ENST00000527699 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
CAPN1-210ENST00000527699 MROH1Q8NDA8 1641 aa15.54■□□□□ 0.08
CAPN1-210ENST00000527699 KCNA6P17658 529 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms