RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CLTCQ00610 1675 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-202ENST00000526433 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
SSSCA1-202ENST00000526433 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-202ENST00000526433 WASHC2CQ9Y4E1 1318 aa24.77■■□□□ 1.56
SSSCA1-202ENST00000526433 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
SSSCA1-202ENST00000526433 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
SSSCA1-202ENST00000526433 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
SSSCA1-202ENST00000526433 EIF2AK4Q9P2K8 1649 aaKnown RBP24.75■■□□□ 1.55
SSSCA1-202ENST00000526433 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
SSSCA1-202ENST00000526433 RNF17Q9BXT8 1623 aaKnown RBP24.72■■□□□ 1.55
SSSCA1-202ENST00000526433 LMTK3Q96Q04 1460 aa24.7■■□□□ 1.54
SSSCA1-202ENST00000526433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.54
SSSCA1-202ENST00000526433 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
SSSCA1-202ENST00000526433 FAM135AQ9P2D6 1515 aa24.68■■□□□ 1.54
SSSCA1-202ENST00000526433 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
SSSCA1-202ENST00000526433 MROH1Q8NDA8 1641 aa24.66■■□□□ 1.54
SSSCA1-202ENST00000526433 HSPA2P54652 639 aa24.66■■□□□ 1.54
SSSCA1-202ENST00000526433 NPATQ14207 1427 aa24.66■■□□□ 1.54
SSSCA1-202ENST00000526433 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
SSSCA1-202ENST00000526433 PREX1Q8TCU6 1659 aa24.65■■□□□ 1.54
SSSCA1-202ENST00000526433 FBXO31Q5XUX0 539 aaPredicted RBP24.64■■□□□ 1.54
SSSCA1-202ENST00000526433 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
SSSCA1-202ENST00000526433 ABCC3O15438 1527 aa24.62■■□□□ 1.53
SSSCA1-202ENST00000526433 KANK1Q14678 1352 aa24.61■■□□□ 1.53
SSSCA1-202ENST00000526433 PZPP20742 1482 aa24.59■■□□□ 1.53
SSSCA1-202ENST00000526433 DEPDC5O75140 1603 aa24.59■■□□□ 1.53
SSSCA1-202ENST00000526433 ZC3H13Q5T200 1668 aaKnown RBP24.59■■□□□ 1.53
SSSCA1-202ENST00000526433 CEP152O94986 1710 aa24.58■■□□□ 1.53
SSSCA1-202ENST00000526433 PRDM15P57071 1507 aaPredicted RBP24.58■■□□□ 1.53
SSSCA1-202ENST00000526433 CFAP65Q6ZU64 1925 aaKnown RBP24.57■■□□□ 1.52
SSSCA1-202ENST00000526433 TNRQ92752 1358 aa24.54■■□□□ 1.52
SSSCA1-202ENST00000526433 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
SSSCA1-202ENST00000526433 VWDEQ8N2E2 1590 aa24.51■■□□□ 1.51
SSSCA1-202ENST00000526433 ARHGAP31Q2M1Z3 1444 aa24.5■■□□□ 1.51
SSSCA1-202ENST00000526433 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
SSSCA1-202ENST00000526433 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
SSSCA1-202ENST00000526433 NAIPQ13075 1403 aa24.46■■□□□ 1.51
SSSCA1-202ENST00000526433 ERVK-7P63135 1459 aa24.45■■□□□ 1.51
SSSCA1-202ENST00000526433 UNC13BO14795 1591 aa24.45■■□□□ 1.5
SSSCA1-202ENST00000526433 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.5
SSSCA1-202ENST00000526433 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.5
SSSCA1-202ENST00000526433 A2ML1A8K2U0 1454 aa24.45■■□□□ 1.5
SSSCA1-202ENST00000526433 NUP155O75694 1391 aa24.43■■□□□ 1.5
SSSCA1-202ENST00000526433 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
SSSCA1-202ENST00000526433 NLRP1Q9C000 1473 aa24.41■■□□□ 1.5
SSSCA1-202ENST00000526433 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
SSSCA1-202ENST00000526433 STRCQ7RTU9 1775 aa24.41■■□□□ 1.5
SSSCA1-202ENST00000526433 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
SSSCA1-202ENST00000526433 EFCAB6Q5THR3 1501 aa24.39■■□□□ 1.49
SSSCA1-202ENST00000526433 GCC2Q8IWJ2 1684 aa24.38■■□□□ 1.49
SSSCA1-202ENST00000526433 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
SSSCA1-202ENST00000526433 TET3O43151 1660 aa24.37■■□□□ 1.49
SSSCA1-202ENST00000526433 NCKAP5LQ9HCH0 1330 aa24.36■■□□□ 1.49
SSSCA1-202ENST00000526433 IQGAP3Q86VI3 1631 aa24.36■■□□□ 1.49
SSSCA1-202ENST00000526433 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
SSSCA1-202ENST00000526433 NOS1P29475 1434 aa24.34■■□□□ 1.49
SSSCA1-202ENST00000526433 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
SSSCA1-202ENST00000526433 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
SSSCA1-202ENST00000526433 PKD2Q13563 968 aa24.33■■□□□ 1.49
SSSCA1-202ENST00000526433 IDI1Q13907 227 aa24.33■■□□□ 1.49
SSSCA1-202ENST00000526433 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
SSSCA1-202ENST00000526433 E9PCH4 1651 aa24.3■■□□□ 1.48
SSSCA1-202ENST00000526433 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
SSSCA1-202ENST00000526433 SLC52A1Q9NWF4 448 aa24.29■■□□□ 1.48
SSSCA1-202ENST00000526433 SYNMO15061 1565 aa24.29■■□□□ 1.48
SSSCA1-202ENST00000526433 PTPRTO14522 1441 aa24.28■■□□□ 1.48
SSSCA1-202ENST00000526433 STAG3Q9UJ98 1225 aa24.28■■□□□ 1.48
SSSCA1-202ENST00000526433 UBR1Q8IWV7 1749 aa24.25■■□□□ 1.47
SSSCA1-202ENST00000526433 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
SSSCA1-202ENST00000526433 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
SSSCA1-202ENST00000526433 SLC4A1APQ9BWU0 796 aaKnown RBP24.22■■□□□ 1.47
SSSCA1-202ENST00000526433 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
SSSCA1-202ENST00000526433 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
SSSCA1-202ENST00000526433 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
SSSCA1-202ENST00000526433 LTKP29376 864 aa24.17■■□□□ 1.46
SSSCA1-202ENST00000526433 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
SSSCA1-202ENST00000526433 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
SSSCA1-202ENST00000526433 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
SSSCA1-202ENST00000526433 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
SSSCA1-202ENST00000526433 ARHGAP23Q9P227 1491 aa24.15■■□□□ 1.46
SSSCA1-202ENST00000526433 NEURL4Q96JN8 1562 aa24.15■■□□□ 1.46
SSSCA1-202ENST00000526433 SLIT1O75093 1534 aa24.15■■□□□ 1.46
SSSCA1-202ENST00000526433 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
SSSCA1-202ENST00000526433 RAB3GAP2Q9H2M9 1393 aa24.14■■□□□ 1.45
SSSCA1-202ENST00000526433 MED14O60244 1454 aa24.13■■□□□ 1.45
SSSCA1-202ENST00000526433 NPHP4O75161 1426 aaPredicted RBP24.13■■□□□ 1.45
SSSCA1-202ENST00000526433 ADGRB3O60242 1522 aa24.13■■□□□ 1.45
SSSCA1-202ENST00000526433 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
SSSCA1-202ENST00000526433 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
SSSCA1-202ENST00000526433 MYO5BQ9ULV0 1848 aa24.11■■□□□ 1.45
SSSCA1-202ENST00000526433 FOXD1Q16676 465 aa24.1■■□□□ 1.45
SSSCA1-202ENST00000526433 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
SSSCA1-202ENST00000526433 CERKQ8TCT0 537 aa24.09■■□□□ 1.45
SSSCA1-202ENST00000526433 ZNF335Q9H4Z2 1342 aaPredicted RBP24.09■■□□□ 1.45
SSSCA1-202ENST00000526433 HRCP23327 699 aa24.07■■□□□ 1.44
SSSCA1-202ENST00000526433 HDGFP51858 240 aaKnown RBP24.07■■□□□ 1.44
SSSCA1-202ENST00000526433 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
SSSCA1-202ENST00000526433 TRPM2O94759 1503 aa24.04■■□□□ 1.44
SSSCA1-202ENST00000526433 LTBP4Q8N2S1 1624 aa24.03■■□□□ 1.44
SSSCA1-202ENST00000526433 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms