RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-215ENST00000525948 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
PUM1-215ENST00000525948 SPAG9O60271 1321 aaKnown RBP16.91■□□□□ 0.3
PUM1-215ENST00000525948 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
PUM1-215ENST00000525948 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
PUM1-215ENST00000525948 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
PUM1-215ENST00000525948 CPS1P31327 1500 aa16.87■□□□□ 0.29
PUM1-215ENST00000525948 HSPA1LP34931 641 aa16.87■□□□□ 0.29
PUM1-215ENST00000525948 HNRNPMP52272 730 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■■■■□ 22
PUM1-215ENST00000525948 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
PUM1-215ENST00000525948 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
PUM1-215ENST00000525948 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
PUM1-215ENST00000525948 GGT6Q6P531 493 aa16.84■□□□□ 0.29
PUM1-215ENST00000525948 PIP4K2BP78356 416 aa16.83■□□□□ 0.28
PUM1-215ENST00000525948 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.28
PUM1-215ENST00000525948 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
PUM1-215ENST00000525948 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
PUM1-215ENST00000525948 CFDP1Q9UEE9 299 aaPredicted RBP16.78■□□□□ 0.28
PUM1-215ENST00000525948 KDM5DQ9BY66 1539 aa16.78■□□□□ 0.28
PUM1-215ENST00000525948 STRCP1A6NGW2 1772 aa16.78■□□□□ 0.28
PUM1-215ENST00000525948 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
PUM1-215ENST00000525948 TNRQ92752 1358 aa16.77■□□□□ 0.28
PUM1-215ENST00000525948 TOM1O60784 492 aa16.77■□□□□ 0.28
PUM1-215ENST00000525948 PZPP20742 1482 aa16.77■□□□□ 0.28
PUM1-215ENST00000525948 DEPDC5O75140 1603 aa16.77■□□□□ 0.27
PUM1-215ENST00000525948 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
PUM1-215ENST00000525948 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
PUM1-215ENST00000525948 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
PUM1-215ENST00000525948 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
PUM1-215ENST00000525948 SYNMO15061 1565 aa16.74■□□□□ 0.27
PUM1-215ENST00000525948 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
PUM1-215ENST00000525948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
PUM1-215ENST00000525948 MED14O60244 1454 aa16.73■□□□□ 0.27
PUM1-215ENST00000525948 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
PUM1-215ENST00000525948 ZNF644Q9H582 1327 aaPredicted RBP16.72■□□□□ 0.27
PUM1-215ENST00000525948 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
PUM1-215ENST00000525948 NPHP4O75161 1426 aaPredicted RBP16.71■□□□□ 0.27
PUM1-215ENST00000525948 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
PUM1-215ENST00000525948 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
PUM1-215ENST00000525948 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
PUM1-215ENST00000525948 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
PUM1-215ENST00000525948 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
PUM1-215ENST00000525948 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
PUM1-215ENST00000525948 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
PUM1-215ENST00000525948 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
PUM1-215ENST00000525948 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
PUM1-215ENST00000525948 KIF3BO15066 747 aa16.66■□□□□ 0.26
PUM1-215ENST00000525948 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
PUM1-215ENST00000525948 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
PUM1-215ENST00000525948 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
PUM1-215ENST00000525948 UBR1Q8IWV7 1749 aa16.63■□□□□ 0.25
PUM1-215ENST00000525948 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
PUM1-215ENST00000525948 ABCC3O15438 1527 aa16.62■□□□□ 0.25
PUM1-215ENST00000525948 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
PUM1-215ENST00000525948 CEP152O94986 1710 aa16.62■□□□□ 0.25
PUM1-215ENST00000525948 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
PUM1-215ENST00000525948 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
PUM1-215ENST00000525948 RGS17Q9UGC6 210 aaPredicted RBP16.59■□□□□ 0.25
PUM1-215ENST00000525948 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
PUM1-215ENST00000525948 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
PUM1-215ENST00000525948 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
PUM1-215ENST00000525948 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
PUM1-215ENST00000525948 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
PUM1-215ENST00000525948 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
PUM1-215ENST00000525948 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
PUM1-215ENST00000525948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■□□□□ 8.7
PUM1-215ENST00000525948 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.23
PUM1-215ENST00000525948 SLIT1O75093 1534 aa16.51■□□□□ 0.23
PUM1-215ENST00000525948 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
PUM1-215ENST00000525948 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
PUM1-215ENST00000525948 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
PUM1-215ENST00000525948 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
PUM1-215ENST00000525948 PRDM15P57071 1507 aaPredicted RBP16.46■□□□□ 0.23
PUM1-215ENST00000525948 LTKP29376 864 aa16.46■□□□□ 0.23
PUM1-215ENST00000525948 POTEAQ6S8J7 498 aa16.46■□□□□ 0.23
PUM1-215ENST00000525948 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
PUM1-215ENST00000525948 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
PUM1-215ENST00000525948 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
PUM1-215ENST00000525948 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
PUM1-215ENST00000525948 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
PUM1-215ENST00000525948 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
PUM1-215ENST00000525948 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
PUM1-215ENST00000525948 KDM5AP29375 1690 aaKnown RBP16.42■□□□□ 0.22
PUM1-215ENST00000525948 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
PUM1-215ENST00000525948 TXNDC2Q86VQ3 553 aa16.41■□□□□ 0.22
PUM1-215ENST00000525948 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
PUM1-215ENST00000525948 PHLPP1O60346 1717 aa16.41■□□□□ 0.22
PUM1-215ENST00000525948 ARHGAP31Q2M1Z3 1444 aa16.4■□□□□ 0.22
PUM1-215ENST00000525948 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
PUM1-215ENST00000525948 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
PUM1-215ENST00000525948 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
PUM1-215ENST00000525948 TET3O43151 1660 aa16.37■□□□□ 0.21
PUM1-215ENST00000525948 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
PUM1-215ENST00000525948 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
PUM1-215ENST00000525948 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
PUM1-215ENST00000525948 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
PUM1-215ENST00000525948 ERBINQ96RT1 1412 aa16.34■□□□□ 0.21
PUM1-215ENST00000525948 ADGRB3O60242 1522 aa16.34■□□□□ 0.21
PUM1-215ENST00000525948 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
PUM1-215ENST00000525948 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
PUM1-215ENST00000525948 MYO5BQ9ULV0 1848 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms