RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 HSPA1LP34931 641 aa15.25■□□□□ 0.03
PTPN12-216ENST00000523952 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
PTPN12-216ENST00000523952 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
PTPN12-216ENST00000523952 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
PTPN12-216ENST00000523952 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
PTPN12-216ENST00000523952 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.02
PTPN12-216ENST00000523952 SHANK2Q9UPX8 1470 aa15.2■□□□□ 0.02
PTPN12-216ENST00000523952 NEURL4Q96JN8 1562 aa15.2■□□□□ 0.02
PTPN12-216ENST00000523952 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
PTPN12-216ENST00000523952 IQGAP1P46940 1657 aa15.19■□□□□ 0.02
PTPN12-216ENST00000523952 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
PTPN12-216ENST00000523952 TNRQ92752 1358 aa15.16■□□□□ 0.02
PTPN12-216ENST00000523952 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
PTPN12-216ENST00000523952 ANKLE2Q86XL3 938 aa15.15■□□□□ 0.02
PTPN12-216ENST00000523952 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
PTPN12-216ENST00000523952 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
PTPN12-216ENST00000523952 STRCP1A6NGW2 1772 aa15.14■□□□□ 0.01
PTPN12-216ENST00000523952 SYNMO15061 1565 aa15.14■□□□□ 0.01
PTPN12-216ENST00000523952 VWDEQ8N2E2 1590 aa15.14■□□□□ 0.01
PTPN12-216ENST00000523952 MTUS2Q5JR59 1369 aa15.13■□□□□ 0.01
PTPN12-216ENST00000523952 UGGT1Q9NYU2 1555 aa15.13■□□□□ 0.01
PTPN12-216ENST00000523952 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
PTPN12-216ENST00000523952 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
PTPN12-216ENST00000523952 THEMISQ8N1K5 641 aaPredicted RBP15.12■□□□□ 0.01
PTPN12-216ENST00000523952 PZPP20742 1482 aa15.12■□□□□ 0.01
PTPN12-216ENST00000523952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.011e-7■■□□□ 12.2
PTPN12-216ENST00000523952 NPHP4O75161 1426 aaPredicted RBP15.1■□□□□ 0.01
PTPN12-216ENST00000523952 KIF3BO15066 747 aa15.1■□□□□ 0.01
PTPN12-216ENST00000523952 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
PTPN12-216ENST00000523952 NLRP1Q9C000 1473 aa15.09■□□□□ 0.01
PTPN12-216ENST00000523952 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
PTPN12-216ENST00000523952 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
PTPN12-216ENST00000523952 DHX29Q7Z478 1369 aaKnown RBP15.09■□□□□ 0.01
PTPN12-216ENST00000523952 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
PTPN12-216ENST00000523952 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0.01
PTPN12-216ENST00000523952 ALKQ9UM73 1620 aa15.07■□□□□ 0
PTPN12-216ENST00000523952 MED14O60244 1454 aa15.07■□□□□ 0
PTPN12-216ENST00000523952 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
PTPN12-216ENST00000523952 CEP152O94986 1710 aa15.06■□□□□ 0
PTPN12-216ENST00000523952 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
PTPN12-216ENST00000523952 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
PTPN12-216ENST00000523952 UBR1Q8IWV7 1749 aa15.04■□□□□ -0
PTPN12-216ENST00000523952 MIA2Q96PC5 1412 aa15.04■□□□□ -0
PTPN12-216ENST00000523952 LRRC7Q96NW7 1537 aa15.03■□□□□ -0
PTPN12-216ENST00000523952 MBD5Q9P267 1494 aa15.03■□□□□ -0
PTPN12-216ENST00000523952 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
PTPN12-216ENST00000523952 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
PTPN12-216ENST00000523952 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
PTPN12-216ENST00000523952 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
PTPN12-216ENST00000523952 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
PTPN12-216ENST00000523952 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
PTPN12-216ENST00000523952 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
PTPN12-216ENST00000523952 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
PTPN12-216ENST00000523952 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
PTPN12-216ENST00000523952 ABCC3O15438 1527 aa14.96□□□□□ -0.02
PTPN12-216ENST00000523952 SCAF11Q99590 1463 aaKnown RBP14.95□□□□□ -0.02
PTPN12-216ENST00000523952 ROBO1Q9Y6N7 1651 aa14.94□□□□□ -0.02
PTPN12-216ENST00000523952 ERVK-7P63135 1459 aa14.94□□□□□ -0.02
PTPN12-216ENST00000523952 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
PTPN12-216ENST00000523952 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
PTPN12-216ENST00000523952 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
PTPN12-216ENST00000523952 RGS17Q9UGC6 210 aaPredicted RBP14.91□□□□□ -0.02
PTPN12-216ENST00000523952 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
PTPN12-216ENST00000523952 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
PTPN12-216ENST00000523952 TXNDC2Q86VQ3 553 aa14.89□□□□□ -0.03
PTPN12-216ENST00000523952 MROH1Q8NDA8 1641 aa14.88□□□□□ -0.03
PTPN12-216ENST00000523952 SLIT1O75093 1534 aa14.88□□□□□ -0.03
PTPN12-216ENST00000523952 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
PTPN12-216ENST00000523952 KDM5AP29375 1690 aaKnown RBP14.87□□□□□ -0.03
PTPN12-216ENST00000523952 FAM135BQ49AJ0 1406 aa14.85□□□□□ -0.03
PTPN12-216ENST00000523952 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
PTPN12-216ENST00000523952 ARHGAP23Q9P227 1491 aa14.85□□□□□ -0.03
PTPN12-216ENST00000523952 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
PTPN12-216ENST00000523952 CROCC2H7BZ55 1655 aa14.84□□□□□ -0.03
PTPN12-216ENST00000523952 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
PTPN12-216ENST00000523952 LTKP29376 864 aa14.83□□□□□ -0.04
PTPN12-216ENST00000523952 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
PTPN12-216ENST00000523952 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
PTPN12-216ENST00000523952 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
PTPN12-216ENST00000523952 TMEM94Q12767 1356 aa14.81□□□□□ -0.04
PTPN12-216ENST00000523952 PRDM15P57071 1507 aaPredicted RBP14.81□□□□□ -0.04
PTPN12-216ENST00000523952 EFCAB6Q5THR3 1501 aa14.81□□□□□ -0.04
PTPN12-216ENST00000523952 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
PTPN12-216ENST00000523952 BCANQ96GW7 911 aa14.8□□□□□ -0.04
PTPN12-216ENST00000523952 MAP3K1Q13233 1512 aa14.78□□□□□ -0.04
PTPN12-216ENST00000523952 MSH6P52701 1360 aa14.78□□□□□ -0.04
PTPN12-216ENST00000523952 KANK1Q14678 1352 aa14.78□□□□□ -0.04
PTPN12-216ENST00000523952 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
PTPN12-216ENST00000523952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPN12-216ENST00000523952 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.04
PTPN12-216ENST00000523952 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
PTPN12-216ENST00000523952 NWD1Q149M9 1564 aa14.77□□□□□ -0.05
PTPN12-216ENST00000523952 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
PTPN12-216ENST00000523952 KCNA6P17658 529 aa14.76□□□□□ -0.05
PTPN12-216ENST00000523952 JCADQ9P266 1359 aa14.75□□□□□ -0.05
PTPN12-216ENST00000523952 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
PTPN12-216ENST00000523952 SLC26A8Q96RN1 970 aa14.75□□□□□ -0.05
PTPN12-216ENST00000523952 MYOM3Q5VTT5 1437 aa14.75□□□□□ -0.05
PTPN12-216ENST00000523952 ERBINQ96RT1 1412 aa14.75□□□□□ -0.05
PTPN12-216ENST00000523952 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms