RNA–Protein interactions for RNA: ENST00000521017.5

CCNC-211, Transcript of cyclin C, humanhuman

TSL 4

Gene CCNC, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-211ENST00000521017 ATP7AQ04656 1500 aa17.28■□□□□ 0.36
CCNC-211ENST00000521017 NPHP4O75161 1426 aaPredicted RBP17.26■□□□□ 0.35
CCNC-211ENST00000521017 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
CCNC-211ENST00000521017 CDC42BPAQ5VT25 1732 aa17.25■□□□□ 0.35
CCNC-211ENST00000521017 KIAA1107Q9UPP5 1409 aa17.25■□□□□ 0.35
CCNC-211ENST00000521017 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
CCNC-211ENST00000521017 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
CCNC-211ENST00000521017 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
CCNC-211ENST00000521017 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
CCNC-211ENST00000521017 MED14O60244 1454 aa17.22■□□□□ 0.35
CCNC-211ENST00000521017 MIA2Q96PC5 1412 aa17.21■□□□□ 0.34
CCNC-211ENST00000521017 KIF3BO15066 747 aa17.2■□□□□ 0.34
CCNC-211ENST00000521017 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
CCNC-211ENST00000521017 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
CCNC-211ENST00000521017 PZPP20742 1482 aa17.18■□□□□ 0.34
CCNC-211ENST00000521017 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
CCNC-211ENST00000521017 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
CCNC-211ENST00000521017 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
CCNC-211ENST00000521017 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
CCNC-211ENST00000521017 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
CCNC-211ENST00000521017 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
CCNC-211ENST00000521017 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
CCNC-211ENST00000521017 LTKP29376 864 aa17.13■□□□□ 0.33
CCNC-211ENST00000521017 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
CCNC-211ENST00000521017 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
CCNC-211ENST00000521017 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
CCNC-211ENST00000521017 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
CCNC-211ENST00000521017 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
CCNC-211ENST00000521017 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
CCNC-211ENST00000521017 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
CCNC-211ENST00000521017 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.32
CCNC-211ENST00000521017 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.32
CCNC-211ENST00000521017 IQGAP1P46940 1657 aa17.07■□□□□ 0.32
CCNC-211ENST00000521017 UPF1Q92900 1129 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCNC-211ENST00000521017 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
CCNC-211ENST00000521017 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
CCNC-211ENST00000521017 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
CCNC-211ENST00000521017 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
CCNC-211ENST00000521017 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
CCNC-211ENST00000521017 TMEM94Q12767 1356 aa17.02■□□□□ 0.31
CCNC-211ENST00000521017 SYNMO15061 1565 aa17.01■□□□□ 0.31
CCNC-211ENST00000521017 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
CCNC-211ENST00000521017 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
CCNC-211ENST00000521017 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
CCNC-211ENST00000521017 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CCNC-211ENST00000521017 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
CCNC-211ENST00000521017 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
CCNC-211ENST00000521017 ABCC3O15438 1527 aa16.97■□□□□ 0.31
CCNC-211ENST00000521017 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
CCNC-211ENST00000521017 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
CCNC-211ENST00000521017 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
CCNC-211ENST00000521017 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
CCNC-211ENST00000521017 KCNA6P17658 529 aa16.93■□□□□ 0.3
CCNC-211ENST00000521017 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
CCNC-211ENST00000521017 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
CCNC-211ENST00000521017 LRP6O75581 1613 aa16.92■□□□□ 0.3
CCNC-211ENST00000521017 SLIT1O75093 1534 aa16.91■□□□□ 0.3
CCNC-211ENST00000521017 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
CCNC-211ENST00000521017 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
CCNC-211ENST00000521017 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
CCNC-211ENST00000521017 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
CCNC-211ENST00000521017 JCADQ9P266 1359 aa16.89■□□□□ 0.3
CCNC-211ENST00000521017 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
CCNC-211ENST00000521017 UBR1Q8IWV7 1749 aa16.89■□□□□ 0.29
CCNC-211ENST00000521017 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.29
CCNC-211ENST00000521017 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
CCNC-211ENST00000521017 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
CCNC-211ENST00000521017 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
CCNC-211ENST00000521017 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
CCNC-211ENST00000521017 IDI1Q13907 227 aa16.84■□□□□ 0.29
CCNC-211ENST00000521017 TET3O43151 1660 aa16.82■□□□□ 0.28
CCNC-211ENST00000521017 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CCNC-211ENST00000521017 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
CCNC-211ENST00000521017 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
CCNC-211ENST00000521017 RXRBP28702 533 aa16.81■□□□□ 0.28
CCNC-211ENST00000521017 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
CCNC-211ENST00000521017 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
CCNC-211ENST00000521017 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
CCNC-211ENST00000521017 MSH6P52701 1360 aa16.78■□□□□ 0.28
CCNC-211ENST00000521017 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
CCNC-211ENST00000521017 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
CCNC-211ENST00000521017 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
CCNC-211ENST00000521017 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
CCNC-211ENST00000521017 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
CCNC-211ENST00000521017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCNC-211ENST00000521017 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
CCNC-211ENST00000521017 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
CCNC-211ENST00000521017 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
CCNC-211ENST00000521017 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
CCNC-211ENST00000521017 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
CCNC-211ENST00000521017 CEP152O94986 1710 aa16.75■□□□□ 0.27
CCNC-211ENST00000521017 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
CCNC-211ENST00000521017 AFF2P51816 1311 aa16.72■□□□□ 0.27
CCNC-211ENST00000521017 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
CCNC-211ENST00000521017 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
CCNC-211ENST00000521017 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
CCNC-211ENST00000521017 EFCAB6Q5THR3 1501 aa16.71■□□□□ 0.27
CCNC-211ENST00000521017 BCANQ96GW7 911 aa16.71■□□□□ 0.27
CCNC-211ENST00000521017 RGS12O14924 1447 aa16.7■□□□□ 0.26
CCNC-211ENST00000521017 MAST1Q9Y2H9 1570 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms