RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	INO80	Q9ULG1	1556 aa	Predicted RBP	13.26	□□□□□ -0.29
PTK2-223	ENST00000520828	KIAA1107	Q9UPP5	1409 aa		13.26	□□□□□ -0.29
PTK2-223	ENST00000520828	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.24	□□□□□ -0.29
PTK2-223	ENST00000520828	TNR	Q92752	1358 aa		13.23	□□□□□ -0.29
PTK2-223	ENST00000520828	ANKLE2	Q86XL3	938 aa		13.23	□□□□□ -0.29
PTK2-223	ENST00000520828	NEURL4	Q96JN8	1562 aa		13.23	□□□□□ -0.29
PTK2-223	ENST00000520828	POLR1A	O95602	1720 aa	Predicted RBP	13.22	□□□□□ -0.29
PTK2-223	ENST00000520828	FYCO1	Q9BQS8	1478 aa		13.21	□□□□□ -0.3
PTK2-223	ENST00000520828	ADGB	Q8N7X0	1667 aa		13.21	□□□□□ -0.3
PTK2-223	ENST00000520828	CCNB3	Q8WWL7	1395 aa		13.2	□□□□□ -0.3
PTK2-223	ENST00000520828	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2-223	ENST00000520828	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2-223	ENST00000520828	VWDE	Q8N2E2	1590 aa		13.2	□□□□□ -0.3
PTK2-223	ENST00000520828	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	4e-14	■■□□□ 14.2
PTK2-223	ENST00000520828	NPHP4	O75161	1426 aa	Predicted RBP	13.18	□□□□□ -0.3
PTK2-223	ENST00000520828	ALK	Q9UM73	1620 aa		13.17	□□□□□ -0.3
PTK2-223	ENST00000520828	PZP	P20742	1482 aa		13.17	□□□□□ -0.3
PTK2-223	ENST00000520828	DHX29	Q7Z478	1369 aa	Known RBP	13.17	□□□□□ -0.3
PTK2-223	ENST00000520828	KIF3B	O15066	747 aa		13.16	□□□□□ -0.3
PTK2-223	ENST00000520828	MED14	O60244	1454 aa		13.16	□□□□□ -0.3
PTK2-223	ENST00000520828	NLRP1	Q9C000	1473 aa		13.16	□□□□□ -0.3
PTK2-223	ENST00000520828	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.15	□□□□□ -0.3
PTK2-223	ENST00000520828	KDM5D	Q9BY66	1539 aa		13.15	□□□□□ -0.3
PTK2-223	ENST00000520828	FAM135A	Q9P2D6	1515 aa		13.15	□□□□□ -0.3
PTK2-223	ENST00000520828	ZNF644	Q9H582	1327 aa	Predicted RBP	13.14	□□□□□ -0.31
PTK2-223	ENST00000520828	WASHC2C	Q9Y4E1	1318 aa		13.14	□□□□□ -0.31
PTK2-223	ENST00000520828	MIA2	Q96PC5	1412 aa		13.14	□□□□□ -0.31
PTK2-223	ENST00000520828	DEPDC5	O75140	1603 aa		13.14	□□□□□ -0.31
PTK2-223	ENST00000520828	UGGT1	Q9NYU2	1555 aa		13.14	□□□□□ -0.31
PTK2-223	ENST00000520828	MBD5	Q9P267	1494 aa		13.13	□□□□□ -0.31
PTK2-223	ENST00000520828	MTUS2	Q5JR59	1369 aa		13.13	□□□□□ -0.31
PTK2-223	ENST00000520828	RNF17	Q9BXT8	1623 aa	Known RBP	13.13	□□□□□ -0.31
PTK2-223	ENST00000520828	LRRC7	Q96NW7	1537 aa		13.13	□□□□□ -0.31
PTK2-223	ENST00000520828	RGS17	Q9UGC6	210 aa	Predicted RBP	13.12	□□□□□ -0.31
PTK2-223	ENST00000520828	IQGAP1	P46940	1657 aa		13.12	□□□□□ -0.31
PTK2-223	ENST00000520828	SYNM	O15061	1565 aa		13.11	□□□□□ -0.31
PTK2-223	ENST00000520828	TIAM1	Q13009	1591 aa		13.08	□□□□□ -0.32
PTK2-223	ENST00000520828	CCDC141	Q6ZP82	1450 aa		13.07	□□□□□ -0.32
PTK2-223	ENST00000520828	STRCP1	A6NGW2	1772 aa		13.07	□□□□□ -0.32
PTK2-223	ENST00000520828	RSPH4A	Q5TD94	716 aa		13.06	□□□□□ -0.32
PTK2-223	ENST00000520828	EHBP1L1	Q8N3D4	1523 aa		13.04	□□□□□ -0.32
PTK2-223	ENST00000520828	POTEA	Q6S8J7	498 aa		13.04	□□□□□ -0.32
PTK2-223	ENST00000520828	PPP4R3CP	Q6ZMV5	832 aa		13.04	□□□□□ -0.32
PTK2-223	ENST00000520828	CEP162	Q5TB80	1403 aa		13.03	□□□□□ -0.32
PTK2-223	ENST00000520828	TSPY4	P0CV99	314 aa		13.02	□□□□□ -0.33
PTK2-223	ENST00000520828	TSPY10	P0CW01	314 aa		13.02	□□□□□ -0.33
PTK2-223	ENST00000520828	FAM135B	Q49AJ0	1406 aa		13.02	□□□□□ -0.33
PTK2-223	ENST00000520828	SCAF11	Q99590	1463 aa	Known RBP	13.02	□□□□□ -0.33
PTK2-223	ENST00000520828	ERVK-7	P63135	1459 aa		13.01	□□□□□ -0.33
PTK2-223	ENST00000520828	CAMSAP2	Q08AD1	1489 aa		13.01	□□□□□ -0.33
PTK2-223	ENST00000520828	ABCC3	O15438	1527 aa		13.01	□□□□□ -0.33
PTK2-223	ENST00000520828	ZC3H13	Q5T200	1668 aa	Known RBP	13.01	□□□□□ -0.33
PTK2-223	ENST00000520828	TXNDC2	Q86VQ3	553 aa		13	□□□□□ -0.33
PTK2-223	ENST00000520828	LTK	P29376	864 aa		12.98	□□□□□ -0.33
PTK2-223	ENST00000520828	EID1	Q9Y6B2	187 aa		12.98	□□□□□ -0.33
PTK2-223	ENST00000520828	UBR1	Q8IWV7	1749 aa		12.97	□□□□□ -0.33
PTK2-223	ENST00000520828	ARHGEF5	Q12774	1597 aa		12.97	□□□□□ -0.33
PTK2-223	ENST00000520828	NCOA2	Q15596	1464 aa		12.97	□□□□□ -0.33
PTK2-223	ENST00000520828	ARHGAP23	Q9P227	1491 aa		12.97	□□□□□ -0.33
PTK2-223	ENST00000520828	SLIT1	O75093	1534 aa		12.96	□□□□□ -0.33
PTK2-223	ENST00000520828	XIRP1	Q702N8	1843 aa	Known RBP	12.95	□□□□□ -0.34
PTK2-223	ENST00000520828	TMEM94	Q12767	1356 aa		12.94	□□□□□ -0.34
PTK2-223	ENST00000520828	LRRC9	Q6ZRR7	1453 aa		12.93	□□□□□ -0.34
PTK2-223	ENST00000520828	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.93	□□□□□ -0.34
PTK2-223	ENST00000520828	ROBO1	Q9Y6N7	1651 aa		12.93	□□□□□ -0.34
PTK2-223	ENST00000520828	PROSER2	Q86WR7	435 aa	Predicted RBP	12.92	□□□□□ -0.34
PTK2-223	ENST00000520828	SETD1A	O15047	1707 aa	Known RBP	12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	MAST1	Q9Y2H9	1570 aa		12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	KCNA6	P17658	529 aa		12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	STAG3	Q9UJ98	1225 aa		12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	TMEM2	Q9UHN6	1383 aa		12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	MROH1	Q8NDA8	1641 aa		12.91	□□□□□ -0.34
PTK2-223	ENST00000520828	JCAD	Q9P266	1359 aa		12.9	□□□□□ -0.34
PTK2-223	ENST00000520828	CEP152	O94986	1710 aa		12.9	□□□□□ -0.34
PTK2-223	ENST00000520828	ARHGAP31	Q2M1Z3	1444 aa		12.89	□□□□□ -0.35
PTK2-223	ENST00000520828	RBM33	Q96EV2	1170 aa	Known RBP	12.89	□□□□□ -0.35
PTK2-223	ENST00000520828	MAP3K1	Q13233	1512 aa		12.88	□□□□□ -0.35
PTK2-223	ENST00000520828	SLC26A8	Q96RN1	970 aa		12.88	□□□□□ -0.35
PTK2-223	ENST00000520828	MSH6	P52701	1360 aa		12.88	□□□□□ -0.35
PTK2-223	ENST00000520828	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
PTK2-223	ENST00000520828	SLAIN2	Q9P270	581 aa		12.87	□□□□□ -0.35
PTK2-223	ENST00000520828	PIK3C2B	O00750	1634 aa		12.87	□□□□□ -0.35
PTK2-223	ENST00000520828	PRDM15	P57071	1507 aa	Predicted RBP	12.87	□□□□□ -0.35
PTK2-223	ENST00000520828	DUOX2	Q9NRD8	1548 aa		12.87	□□□□□ -0.35
PTK2-223	ENST00000520828	CFAP65	Q6ZU64	1925 aa	Known RBP	12.86	□□□□□ -0.35
PTK2-223	ENST00000520828	NKTR	P30414	1462 aa	Known RBP	12.86	□□□□□ -0.35
PTK2-223	ENST00000520828	EFCAB6	Q5THR3	1501 aa		12.86	□□□□□ -0.35
PTK2-223	ENST00000520828	PHLPP1	O60346	1717 aa		12.85	□□□□□ -0.35
PTK2-223	ENST00000520828	HOXD11	P31277	338 aa	Predicted RBP	12.85	□□□□□ -0.35
PTK2-223	ENST00000520828	MEX3C	Q5U5Q3	659 aa	Known RBP	12.85	□□□□□ -0.35
PTK2-223	ENST00000520828	ZNF772	Q68DY9	489 aa	Predicted RBP	12.85	□□□□□ -0.35
PTK2-223	ENST00000520828	TRIM52	Q96A61	297 aa		12.84	□□□□□ -0.35
PTK2-223	ENST00000520828	BCAN	Q96GW7	911 aa		12.84	□□□□□ -0.35
PTK2-223	ENST00000520828	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	8e-7	■■□□□ 14
PTK2-223	ENST00000520828	TET3	O43151	1660 aa		12.83	□□□□□ -0.35
PTK2-223	ENST00000520828	KANK1	Q14678	1352 aa		12.83	□□□□□ -0.36
PTK2-223	ENST00000520828	IDI1	Q13907	227 aa		12.83	□□□□□ -0.36
PTK2-223	ENST00000520828	SPATA31A6	Q5VVP1	1343 aa		12.83	□□□□□ -0.36
PTK2-223	ENST00000520828	KDM5A	P29375	1690 aa	Known RBP	12.83	□□□□□ -0.36
PTK2-223	ENST00000520828	KIF15	Q9NS87	1388 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms