RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
MRPS28-205ENST00000519386 HECW2Q9P2P5 1572 aa10.82□□□□□ -0.68
MRPS28-205ENST00000519386 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
MRPS28-205ENST00000519386 MAGI2Q86UL8 1455 aa10.81□□□□□ -0.68
MRPS28-205ENST00000519386 ADGBQ8N7X0 1667 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 ARHGEF5Q12774 1597 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 CCDC141Q6ZP82 1450 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 MLH3Q9UHC1 1453 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 KIDINS220Q9ULH0 1771 aa10.8□□□□□ -0.68
MRPS28-205ENST00000519386 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
MRPS28-205ENST00000519386 ABCA6Q8N139 1617 aa10.79□□□□□ -0.68
MRPS28-205ENST00000519386 SPAG9O60271 1321 aaKnown RBP10.79□□□□□ -0.68
MRPS28-205ENST00000519386 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
MRPS28-205ENST00000519386 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
MRPS28-205ENST00000519386 DIP2CQ9Y2E4 1556 aa10.78□□□□□ -0.68
MRPS28-205ENST00000519386 HFM1A2PYH4 1435 aa10.77□□□□□ -0.68
MRPS28-205ENST00000519386 ATP10AO60312 1499 aa10.77□□□□□ -0.69
MRPS28-205ENST00000519386 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
MRPS28-205ENST00000519386 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
MRPS28-205ENST00000519386 POTEHQ6S545 545 aa10.77□□□□□ -0.69
MRPS28-205ENST00000519386 SIGLEC1Q9BZZ2 1709 aa10.76□□□□□ -0.69
MRPS28-205ENST00000519386 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
MRPS28-205ENST00000519386 ABCC5O15440 1437 aa10.75□□□□□ -0.69
MRPS28-205ENST00000519386 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
MRPS28-205ENST00000519386 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
MRPS28-205ENST00000519386 SETD5Q9C0A6 1442 aa10.75□□□□□ -0.69
MRPS28-205ENST00000519386 MAST1Q9Y2H9 1570 aa10.74□□□□□ -0.69
MRPS28-205ENST00000519386 TSPY4P0CV99 314 aa10.74□□□□□ -0.69
MRPS28-205ENST00000519386 TSPY10P0CW01 314 aa10.74□□□□□ -0.69
MRPS28-205ENST00000519386 RTEL1-TNFRSF6BF6WH68 1400 aa10.74□□□□□ -0.69
MRPS28-205ENST00000519386 DAPK1P53355 1430 aa10.74□□□□□ -0.69
MRPS28-205ENST00000519386 SPDYE1Q8NFV5 336 aaPredicted RBP10.73□□□□□ -0.69
MRPS28-205ENST00000519386 ARID4BQ4LE39 1312 aaPredicted RBP10.73□□□□□ -0.69
MRPS28-205ENST00000519386 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
MRPS28-205ENST00000519386 SHANK2Q9UPX8 1470 aa10.73□□□□□ -0.69
MRPS28-205ENST00000519386 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
MRPS28-205ENST00000519386 DHX57Q6P158 1386 aaKnown RBP10.72□□□□□ -0.69
MRPS28-205ENST00000519386 A2MP01023 1474 aa10.71□□□□□ -0.69
MRPS28-205ENST00000519386 ROCK1Q13464 1354 aa10.71□□□□□ -0.69
MRPS28-205ENST00000519386 RAB3GAP2Q9H2M9 1393 aa10.71□□□□□ -0.69
MRPS28-205ENST00000519386 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
MRPS28-205ENST00000519386 PLXNC1O60486 1568 aa10.7□□□□□ -0.7
MRPS28-205ENST00000519386 ADGRL2O95490 1459 aa10.7□□□□□ -0.7
MRPS28-205ENST00000519386 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
MRPS28-205ENST00000519386 CHIC2Q9UKJ5 165 aa10.7□□□□□ -0.7
MRPS28-205ENST00000519386 AGLP35573 1532 aa10.69□□□□□ -0.7
MRPS28-205ENST00000519386 PTPRKQ15262 1439 aa10.69□□□□□ -0.7
MRPS28-205ENST00000519386 ADAMTSL3P82987 1691 aa10.69□□□□□ -0.7
MRPS28-205ENST00000519386 NAIPQ13075 1403 aa10.68□□□□□ -0.7
MRPS28-205ENST00000519386 DHX29Q7Z478 1369 aaKnown RBP10.68□□□□□ -0.7
MRPS28-205ENST00000519386 ITGAEP38570 1179 aa10.68□□□□□ -0.7
MRPS28-205ENST00000519386 MLECQ14165 292 aa10.68□□□□□ -0.7
MRPS28-205ENST00000519386 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
MRPS28-205ENST00000519386 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
MRPS28-205ENST00000519386 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
MRPS28-205ENST00000519386 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
MRPS28-205ENST00000519386 NCOA1Q15788 1441 aa10.67□□□□□ -0.7
MRPS28-205ENST00000519386 MADDQ8WXG6 1647 aa10.66□□□□□ -0.7
MRPS28-205ENST00000519386 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
MRPS28-205ENST00000519386 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
MRPS28-205ENST00000519386 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
MRPS28-205ENST00000519386 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
MRPS28-205ENST00000519386 RIMS1Q86UR5 1692 aaKnown RBP10.64□□□□□ -0.71
MRPS28-205ENST00000519386 KIF3BO15066 747 aa10.64□□□□□ -0.71
MRPS28-205ENST00000519386 PROM2Q8N271 834 aa10.63□□□□□ -0.71
MRPS28-205ENST00000519386 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
MRPS28-205ENST00000519386 ERBINQ96RT1 1412 aa10.62□□□□□ -0.71
MRPS28-205ENST00000519386 GGT6Q6P531 493 aa10.62□□□□□ -0.71
MRPS28-205ENST00000519386 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
MRPS28-205ENST00000519386 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
MRPS28-205ENST00000519386 MROH1Q8NDA8 1641 aa10.6□□□□□ -0.71
MRPS28-205ENST00000519386 PTPRMP28827 1452 aa10.6□□□□□ -0.71
MRPS28-205ENST00000519386 KDM5DQ9BY66 1539 aa10.59□□□□□ -0.71
MRPS28-205ENST00000519386 CLTCQ00610 1675 aaKnown RBP10.59□□□□□ -0.71
MRPS28-205ENST00000519386 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
MRPS28-205ENST00000519386 CNTLNQ9NXG0 1405 aa10.58□□□□□ -0.72
MRPS28-205ENST00000519386 DEPDC5O75140 1603 aa10.57□□□□□ -0.72
MRPS28-205ENST00000519386 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
MRPS28-205ENST00000519386 MROH2AA6NES4 1674 aa10.57□□□□□ -0.72
MRPS28-205ENST00000519386 C3P01024 1663 aa10.57□□□□□ -0.72
MRPS28-205ENST00000519386 CEP152O94986 1710 aa10.56□□□□□ -0.72
MRPS28-205ENST00000519386 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
MRPS28-205ENST00000519386 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
MRPS28-205ENST00000519386 ABCC3O15438 1527 aa10.56□□□□□ -0.72
MRPS28-205ENST00000519386 FAM135AQ9P2D6 1515 aa10.56□□□□□ -0.72
MRPS28-205ENST00000519386 UNC13BO14795 1591 aa10.56□□□□□ -0.72
MRPS28-205ENST00000519386 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
MRPS28-205ENST00000519386 FKBP8Q14318 412 aa10.55□□□□□ -0.72
MRPS28-205ENST00000519386 WASHC2CQ9Y4E1 1318 aa10.55□□□□□ -0.72
MRPS28-205ENST00000519386 ZC3H13Q5T200 1668 aaKnown RBP10.54□□□□□ -0.72
MRPS28-205ENST00000519386 VWDEQ8N2E2 1590 aa10.54□□□□□ -0.72
MRPS28-205ENST00000519386 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
MRPS28-205ENST00000519386 ZMYM3Q14202 1370 aa10.53□□□□□ -0.72
MRPS28-205ENST00000519386 KANK1Q14678 1352 aa10.53□□□□□ -0.72
MRPS28-205ENST00000519386 CFAP65Q6ZU64 1925 aaKnown RBP10.52□□□□□ -0.72
MRPS28-205ENST00000519386 CAMSAP1Q5T5Y3 1602 aa10.52□□□□□ -0.73
MRPS28-205ENST00000519386 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.73
MRPS28-205ENST00000519386 PZPP20742 1482 aa10.51□□□□□ -0.73
MRPS28-205ENST00000519386 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms