RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SH2D4A-202ENST00000518040 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
SH2D4A-202ENST00000518040 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
SH2D4A-202ENST00000518040 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
SH2D4A-202ENST00000518040 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
SH2D4A-202ENST00000518040 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
SH2D4A-202ENST00000518040 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.18
SH2D4A-202ENST00000518040 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
SH2D4A-202ENST00000518040 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
SH2D4A-202ENST00000518040 NEURL4Q96JN8 1562 aa16.19■□□□□ 0.18
SH2D4A-202ENST00000518040 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
SH2D4A-202ENST00000518040 TNRQ92752 1358 aa16.18■□□□□ 0.18
SH2D4A-202ENST00000518040 THEMISQ8N1K5 641 aaPredicted RBP16.18■□□□□ 0.18
SH2D4A-202ENST00000518040 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
SH2D4A-202ENST00000518040 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
SH2D4A-202ENST00000518040 MED14O60244 1454 aa16.15■□□□□ 0.18
SH2D4A-202ENST00000518040 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
SH2D4A-202ENST00000518040 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
SH2D4A-202ENST00000518040 PZPP20742 1482 aa16.14■□□□□ 0.17
SH2D4A-202ENST00000518040 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
SH2D4A-202ENST00000518040 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
SH2D4A-202ENST00000518040 RTEL1-TNFRSF6BF6WH68 1400 aa16.13■□□□□ 0.17
SH2D4A-202ENST00000518040 NPHP4O75161 1426 aaPredicted RBP16.13■□□□□ 0.17
SH2D4A-202ENST00000518040 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
SH2D4A-202ENST00000518040 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
SH2D4A-202ENST00000518040 DHX29Q7Z478 1369 aaKnown RBP16.12■□□□□ 0.17
SH2D4A-202ENST00000518040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
SH2D4A-202ENST00000518040 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
SH2D4A-202ENST00000518040 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
SH2D4A-202ENST00000518040 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
SH2D4A-202ENST00000518040 UGGT1Q9NYU2 1555 aa16.1■□□□□ 0.17
SH2D4A-202ENST00000518040 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
SH2D4A-202ENST00000518040 SYNMO15061 1565 aa16.1■□□□□ 0.17
SH2D4A-202ENST00000518040 MIA2Q96PC5 1412 aa16.09■□□□□ 0.17
SH2D4A-202ENST00000518040 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.17
SH2D4A-202ENST00000518040 IQGAP1P46940 1657 aa16.08■□□□□ 0.16
SH2D4A-202ENST00000518040 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
SH2D4A-202ENST00000518040 KIF3BO15066 747 aa16.07■□□□□ 0.16
SH2D4A-202ENST00000518040 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
SH2D4A-202ENST00000518040 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
SH2D4A-202ENST00000518040 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
SH2D4A-202ENST00000518040 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
SH2D4A-202ENST00000518040 STRCP1A6NGW2 1772 aa16■□□□□ 0.15
SH2D4A-202ENST00000518040 ZNF644Q9H582 1327 aaPredicted RBP16■□□□□ 0.15
SH2D4A-202ENST00000518040 CCDC141Q6ZP82 1450 aa15.98■□□□□ 0.15
SH2D4A-202ENST00000518040 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
SH2D4A-202ENST00000518040 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
SH2D4A-202ENST00000518040 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
SH2D4A-202ENST00000518040 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
SH2D4A-202ENST00000518040 SCAF11Q99590 1463 aaKnown RBP15.94■□□□□ 0.14
SH2D4A-202ENST00000518040 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
SH2D4A-202ENST00000518040 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
SH2D4A-202ENST00000518040 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
SH2D4A-202ENST00000518040 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
SH2D4A-202ENST00000518040 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
SH2D4A-202ENST00000518040 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
SH2D4A-202ENST00000518040 ABCC3O15438 1527 aa15.9■□□□□ 0.14
SH2D4A-202ENST00000518040 EID1Q9Y6B2 187 aa15.9■□□□□ 0.14
SH2D4A-202ENST00000518040 SLIT1O75093 1534 aa15.9■□□□□ 0.14
SH2D4A-202ENST00000518040 UBR1Q8IWV7 1749 aa15.89■□□□□ 0.13
SH2D4A-202ENST00000518040 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
SH2D4A-202ENST00000518040 RNF39Q9H2S5 420 aa15.89■□□□□ 0.13
SH2D4A-202ENST00000518040 ARHGAP23Q9P227 1491 aa15.89■□□□□ 0.13
SH2D4A-202ENST00000518040 CAMSAP2Q08AD1 1489 aa15.88■□□□□ 0.13
SH2D4A-202ENST00000518040 ARHGEF5Q12774 1597 aa15.88■□□□□ 0.13
SH2D4A-202ENST00000518040 XIRP1Q702N8 1843 aaKnown RBP15.88■□□□□ 0.13
SH2D4A-202ENST00000518040 LRRC9Q6ZRR7 1453 aa15.87■□□□□ 0.13
SH2D4A-202ENST00000518040 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
SH2D4A-202ENST00000518040 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
SH2D4A-202ENST00000518040 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
SH2D4A-202ENST00000518040 LTKP29376 864 aa15.86■□□□□ 0.13
SH2D4A-202ENST00000518040 ROBO1Q9Y6N7 1651 aa15.84■□□□□ 0.13
SH2D4A-202ENST00000518040 TMEM94Q12767 1356 aa15.84■□□□□ 0.13
SH2D4A-202ENST00000518040 KCNA6P17658 529 aa15.83■□□□□ 0.12
SH2D4A-202ENST00000518040 JCADQ9P266 1359 aa15.82■□□□□ 0.12
SH2D4A-202ENST00000518040 ARHGAP31Q2M1Z3 1444 aa15.81■□□□□ 0.12
SH2D4A-202ENST00000518040 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
SH2D4A-202ENST00000518040 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
SH2D4A-202ENST00000518040 TMEM2Q9UHN6 1383 aa15.8■□□□□ 0.12
SH2D4A-202ENST00000518040 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
SH2D4A-202ENST00000518040 ZNF772Q68DY9 489 aaPredicted RBP15.79■□□□□ 0.12
SH2D4A-202ENST00000518040 UPF1Q92900 1129 aaKnown RBP eCLIP15.79■□□□□ 0.12
SH2D4A-202ENST00000518040 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SH2D4A-202ENST00000518040 MROH1Q8NDA8 1641 aa15.78■□□□□ 0.12
SH2D4A-202ENST00000518040 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
SH2D4A-202ENST00000518040 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
SH2D4A-202ENST00000518040 CEP152O94986 1710 aa15.78■□□□□ 0.12
SH2D4A-202ENST00000518040 MSH6P52701 1360 aa15.78■□□□□ 0.12
SH2D4A-202ENST00000518040 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.12
SH2D4A-202ENST00000518040 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
SH2D4A-202ENST00000518040 PRDM15P57071 1507 aaPredicted RBP15.77■□□□□ 0.12
SH2D4A-202ENST00000518040 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
SH2D4A-202ENST00000518040 SLAIN2Q9P270 581 aa15.76■□□□□ 0.11
SH2D4A-202ENST00000518040 SPATA31A6Q5VVP1 1343 aa15.76■□□□□ 0.11
SH2D4A-202ENST00000518040 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
SH2D4A-202ENST00000518040 FGD6Q6ZV73 1430 aa15.74■□□□□ 0.11
SH2D4A-202ENST00000518040 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
SH2D4A-202ENST00000518040 PIK3C2BO00750 1634 aa15.74■□□□□ 0.11
SH2D4A-202ENST00000518040 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
SH2D4A-202ENST00000518040 TET3O43151 1660 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms