RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
CAST-239ENST00000513666 A2MP01023 1474 aa14.85□□□□□ -0.03
CAST-239ENST00000513666 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
CAST-239ENST00000513666 A2ML1A8K2U0 1454 aa14.84□□□□□ -0.03
CAST-239ENST00000513666 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.03
CAST-239ENST00000513666 CPS1P31327 1500 aa14.83□□□□□ -0.03
CAST-239ENST00000513666 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.03
CAST-239ENST00000513666 DNMT1P26358 1616 aaKnown RBP14.83□□□□□ -0.04
CAST-239ENST00000513666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.045e-7■■■□□ 18.3
CAST-239ENST00000513666 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
CAST-239ENST00000513666 TOM1O60784 492 aa14.82□□□□□ -0.04
CAST-239ENST00000513666 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
CAST-239ENST00000513666 GGT6Q6P531 493 aa14.82□□□□□ -0.04
CAST-239ENST00000513666 POLR1AO95602 1720 aaPredicted RBP14.81□□□□□ -0.04
CAST-239ENST00000513666 ADGBQ8N7X0 1667 aa14.8□□□□□ -0.04
CAST-239ENST00000513666 NEURL4Q96JN8 1562 aa14.8□□□□□ -0.04
CAST-239ENST00000513666 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
CAST-239ENST00000513666 SHANK2Q9UPX8 1470 aa14.79□□□□□ -0.04
CAST-239ENST00000513666 CFDP1Q9UEE9 299 aaPredicted RBP14.76□□□□□ -0.05
CAST-239ENST00000513666 VWDEQ8N2E2 1590 aa14.75□□□□□ -0.05
CAST-239ENST00000513666 ALKQ9UM73 1620 aa14.75□□□□□ -0.05
CAST-239ENST00000513666 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
CAST-239ENST00000513666 TNRQ92752 1358 aa14.75□□□□□ -0.05
CAST-239ENST00000513666 PZPP20742 1482 aa14.72□□□□□ -0.05
CAST-239ENST00000513666 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
CAST-239ENST00000513666 ANKLE2Q86XL3 938 aa14.71□□□□□ -0.05
CAST-239ENST00000513666 FAM135AQ9P2D6 1515 aa14.71□□□□□ -0.05
CAST-239ENST00000513666 DEPDC5O75140 1603 aa14.71□□□□□ -0.06
CAST-239ENST00000513666 MED14O60244 1454 aa14.71□□□□□ -0.06
CAST-239ENST00000513666 RTEL1-TNFRSF6BF6WH68 1400 aa14.71□□□□□ -0.06
CAST-239ENST00000513666 DHX29Q7Z478 1369 aaKnown RBP14.71□□□□□ -0.06
CAST-239ENST00000513666 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
CAST-239ENST00000513666 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
CAST-239ENST00000513666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAST-239ENST00000513666 NPHP4O75161 1426 aaPredicted RBP14.69□□□□□ -0.06
CAST-239ENST00000513666 ZNF644Q9H582 1327 aaPredicted RBP14.68□□□□□ -0.06
CAST-239ENST00000513666 THEMISQ8N1K5 641 aaPredicted RBP14.68□□□□□ -0.06
CAST-239ENST00000513666 NLRP1Q9C000 1473 aa14.68□□□□□ -0.06
CAST-239ENST00000513666 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
CAST-239ENST00000513666 UGGT1Q9NYU2 1555 aa14.67□□□□□ -0.06
CAST-239ENST00000513666 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
CAST-239ENST00000513666 IQGAP1P46940 1657 aa14.67□□□□□ -0.06
CAST-239ENST00000513666 KIF3BO15066 747 aa14.66□□□□□ -0.06
CAST-239ENST00000513666 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
CAST-239ENST00000513666 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
CAST-239ENST00000513666 STRCP1A6NGW2 1772 aa14.65□□□□□ -0.06
CAST-239ENST00000513666 LRRC7Q96NW7 1537 aa14.65□□□□□ -0.06
CAST-239ENST00000513666 SYNMO15061 1565 aa14.65□□□□□ -0.06
CAST-239ENST00000513666 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
CAST-239ENST00000513666 CCDC141Q6ZP82 1450 aa14.61□□□□□ -0.07
CAST-239ENST00000513666 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
CAST-239ENST00000513666 RGS17Q9UGC6 210 aaPredicted RBP14.61□□□□□ -0.07
CAST-239ENST00000513666 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
CAST-239ENST00000513666 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
CAST-239ENST00000513666 ZC3H13Q5T200 1668 aaKnown RBP14.59□□□□□ -0.07
CAST-239ENST00000513666 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
CAST-239ENST00000513666 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
CAST-239ENST00000513666 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
CAST-239ENST00000513666 ABCC3O15438 1527 aa14.55□□□□□ -0.08
CAST-239ENST00000513666 ERVK-7P63135 1459 aa14.54□□□□□ -0.08
CAST-239ENST00000513666 XIRP1Q702N8 1843 aaKnown RBP14.54□□□□□ -0.08
CAST-239ENST00000513666 ARHGEF5Q12774 1597 aa14.54□□□□□ -0.08
CAST-239ENST00000513666 UBR1Q8IWV7 1749 aa14.53□□□□□ -0.08
CAST-239ENST00000513666 SCAF11Q99590 1463 aaKnown RBP14.53□□□□□ -0.08
CAST-239ENST00000513666 NCOA2Q15596 1464 aa14.51□□□□□ -0.09
CAST-239ENST00000513666 FAM135BQ49AJ0 1406 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 SLIT1O75093 1534 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 POTEAQ6S8J7 498 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 ARHGAP23Q9P227 1491 aa14.5□□□□□ -0.09
CAST-239ENST00000513666 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
CAST-239ENST00000513666 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
CAST-239ENST00000513666 LTKP29376 864 aa14.48□□□□□ -0.09
CAST-239ENST00000513666 MAST1Q9Y2H9 1570 aa14.48□□□□□ -0.09
CAST-239ENST00000513666 CFAP65Q6ZU64 1925 aaKnown RBP14.48□□□□□ -0.09
CAST-239ENST00000513666 CEP152O94986 1710 aa14.47□□□□□ -0.09
CAST-239ENST00000513666 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
CAST-239ENST00000513666 ROBO1Q9Y6N7 1651 aa14.44□□□□□ -0.1
CAST-239ENST00000513666 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
CAST-239ENST00000513666 TMEM94Q12767 1356 aa14.43□□□□□ -0.1
CAST-239ENST00000513666 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
CAST-239ENST00000513666 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
CAST-239ENST00000513666 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
CAST-239ENST00000513666 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
CAST-239ENST00000513666 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
CAST-239ENST00000513666 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
CAST-239ENST00000513666 PRDM15P57071 1507 aaPredicted RBP14.39□□□□□ -0.11
CAST-239ENST00000513666 DUOX2Q9NRD8 1548 aa14.39□□□□□ -0.11
CAST-239ENST00000513666 KCNA6P17658 529 aa14.39□□□□□ -0.11
CAST-239ENST00000513666 KDM5AP29375 1690 aaKnown RBP14.38□□□□□ -0.11
CAST-239ENST00000513666 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
CAST-239ENST00000513666 TET3O43151 1660 aa14.37□□□□□ -0.11
CAST-239ENST00000513666 EFCAB6Q5THR3 1501 aa14.36□□□□□ -0.11
CAST-239ENST00000513666 PHLPP1O60346 1717 aa14.36□□□□□ -0.11
CAST-239ENST00000513666 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
CAST-239ENST00000513666 NWD1Q149M9 1564 aa14.36□□□□□ -0.11
CAST-239ENST00000513666 JCADQ9P266 1359 aa14.35□□□□□ -0.11
CAST-239ENST00000513666 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
CAST-239ENST00000513666 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms