RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
DDR1-269ENST00000512725 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
DDR1-269ENST00000512725 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
DDR1-269ENST00000512725 MED1Q15648 1581 aaPredicted RBP25.75■■□□□ 1.71
DDR1-269ENST00000512725 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
DDR1-269ENST00000512725 SHANK2Q9UPX8 1470 aa25.74■■□□□ 1.71
DDR1-269ENST00000512725 ANKLE2Q86XL3 938 aa25.74■■□□□ 1.71
DDR1-269ENST00000512725 CPS1P31327 1500 aa25.73■■□□□ 1.71
DDR1-269ENST00000512725 WASHC2CQ9Y4E1 1318 aa25.73■■□□□ 1.71
DDR1-269ENST00000512725 PHF23Q9BUL5 403 aaPredicted RBP25.73■■□□□ 1.71
DDR1-269ENST00000512725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.71
DDR1-269ENST00000512725 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
DDR1-269ENST00000512725 RTEL1-TNFRSF6BF6WH68 1400 aa25.71■■□□□ 1.71
DDR1-269ENST00000512725 NEURL4Q96JN8 1562 aa25.7■■□□□ 1.71
DDR1-269ENST00000512725 THEMISQ8N1K5 641 aaPredicted RBP25.69■■□□□ 1.7
DDR1-269ENST00000512725 EHBP1L1Q8N3D4 1523 aa25.68■■□□□ 1.7
DDR1-269ENST00000512725 KDM5DQ9BY66 1539 aa25.68■■□□□ 1.7
DDR1-269ENST00000512725 PZPP20742 1482 aa25.67■■□□□ 1.7
DDR1-269ENST00000512725 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
DDR1-269ENST00000512725 NPHP4O75161 1426 aaPredicted RBP25.63■■□□□ 1.69
DDR1-269ENST00000512725 UGGT1Q9NYU2 1555 aa25.63■■□□□ 1.69
DDR1-269ENST00000512725 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
DDR1-269ENST00000512725 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
DDR1-269ENST00000512725 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
DDR1-269ENST00000512725 VWDEQ8N2E2 1590 aa25.61■■□□□ 1.69
DDR1-269ENST00000512725 CAMSAP2Q08AD1 1489 aa25.6■■□□□ 1.69
DDR1-269ENST00000512725 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
DDR1-269ENST00000512725 TSPY4P0CV99 314 aa25.58■■□□□ 1.69
DDR1-269ENST00000512725 TSPY10P0CW01 314 aa25.58■■□□□ 1.69
DDR1-269ENST00000512725 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
DDR1-269ENST00000512725 IQGAP1P46940 1657 aa25.55■■□□□ 1.68
DDR1-269ENST00000512725 NCOA2Q15596 1464 aa25.54■■□□□ 1.68
DDR1-269ENST00000512725 DEPDC5O75140 1603 aa25.53■■□□□ 1.68
DDR1-269ENST00000512725 MED14O60244 1454 aa25.53■■□□□ 1.68
DDR1-269ENST00000512725 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
DDR1-269ENST00000512725 LRRC7Q96NW7 1537 aa25.47■■□□□ 1.67
DDR1-269ENST00000512725 STRCP1A6NGW2 1772 aa25.47■■□□□ 1.67
DDR1-269ENST00000512725 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
DDR1-269ENST00000512725 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
DDR1-269ENST00000512725 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
DDR1-269ENST00000512725 ABCC3O15438 1527 aa25.43■■□□□ 1.66
DDR1-269ENST00000512725 ERVK-7P63135 1459 aa25.41■■□□□ 1.66
DDR1-269ENST00000512725 SYNMO15061 1565 aa25.41■■□□□ 1.66
DDR1-269ENST00000512725 ZC3H13Q5T200 1668 aaKnown RBP25.41■■□□□ 1.66
DDR1-269ENST00000512725 CEP152O94986 1710 aa25.38■■□□□ 1.65
DDR1-269ENST00000512725 TXNDC2Q86VQ3 553 aa25.38■■□□□ 1.65
DDR1-269ENST00000512725 SCAF11Q99590 1463 aaKnown RBP25.36■■□□□ 1.65
DDR1-269ENST00000512725 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
DDR1-269ENST00000512725 LTKP29376 864 aa25.34■■□□□ 1.65
DDR1-269ENST00000512725 EID1Q9Y6B2 187 aa25.34■■□□□ 1.65
DDR1-269ENST00000512725 EIF2AK4Q9P2K8 1649 aaKnown RBP25.33■■□□□ 1.65
DDR1-269ENST00000512725 MAST1Q9Y2H9 1570 aa25.32■■□□□ 1.64
DDR1-269ENST00000512725 STAG3Q9UJ98 1225 aa25.32■■□□□ 1.64
DDR1-269ENST00000512725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.31■■□□□ 1.64
DDR1-269ENST00000512725 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
DDR1-269ENST00000512725 MROH1Q8NDA8 1641 aa25.29■■□□□ 1.64
DDR1-269ENST00000512725 LRRC9Q6ZRR7 1453 aa25.28■■□□□ 1.64
DDR1-269ENST00000512725 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
DDR1-269ENST00000512725 XIRP1Q702N8 1843 aaKnown RBP25.25■■□□□ 1.63
DDR1-269ENST00000512725 SLIT1O75093 1534 aa25.24■■□□□ 1.63
DDR1-269ENST00000512725 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
DDR1-269ENST00000512725 ARHGAP23Q9P227 1491 aa25.23■■□□□ 1.63
DDR1-269ENST00000512725 KANK4Q5T7N3 995 aaPredicted RBP25.22■■□□□ 1.63
DDR1-269ENST00000512725 MYOM3Q5VTT5 1437 aa25.21■■□□□ 1.63
DDR1-269ENST00000512725 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
DDR1-269ENST00000512725 KIF15Q9NS87 1388 aa25.2■■□□□ 1.63
DDR1-269ENST00000512725 PIK3C2BO00750 1634 aa25.2■■□□□ 1.62
DDR1-269ENST00000512725 PROSER2Q86WR7 435 aaPredicted RBP25.2■■□□□ 1.62
DDR1-269ENST00000512725 TMEM94Q12767 1356 aa25.19■■□□□ 1.62
DDR1-269ENST00000512725 POTEAQ6S8J7 498 aa25.19■■□□□ 1.62
DDR1-269ENST00000512725 BCANQ96GW7 911 aa25.19■■□□□ 1.62
DDR1-269ENST00000512725 SLC26A8Q96RN1 970 aa25.18■■□□□ 1.62
DDR1-269ENST00000512725 FAM135BQ49AJ0 1406 aa25.18■■□□□ 1.62
DDR1-269ENST00000512725 VPS8Q8N3P4 1428 aa25.18■■□□□ 1.62
DDR1-269ENST00000512725 KANK1Q14678 1352 aa25.18■■□□□ 1.62
DDR1-269ENST00000512725 TMEM2Q9UHN6 1383 aa25.18■■□□□ 1.62
DDR1-269ENST00000512725 ARHGAP31Q2M1Z3 1444 aa25.17■■□□□ 1.62
DDR1-269ENST00000512725 PRDM15P57071 1507 aaPredicted RBP25.15■■□□□ 1.62
DDR1-269ENST00000512725 KCNA6P17658 529 aa25.14■■□□□ 1.62
DDR1-269ENST00000512725 ROBO1Q9Y6N7 1651 aa25.13■■□□□ 1.61
DDR1-269ENST00000512725 ERBINQ96RT1 1412 aa25.13■■□□□ 1.61
DDR1-269ENST00000512725 IDI1Q13907 227 aa25.12■■□□□ 1.61
DDR1-269ENST00000512725 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
DDR1-269ENST00000512725 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
DDR1-269ENST00000512725 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
DDR1-269ENST00000512725 ABCC5O15440 1437 aa25.08■■□□□ 1.61
DDR1-269ENST00000512725 CROCC2H7BZ55 1655 aa25.07■■□□□ 1.6
DDR1-269ENST00000512725 MSH6P52701 1360 aa25.05■■□□□ 1.6
DDR1-269ENST00000512725 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
DDR1-269ENST00000512725 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
DDR1-269ENST00000512725 APLP2Q06481 763 aa25.04■■□□□ 1.6
DDR1-269ENST00000512725 DAPK1P53355 1430 aa25.03■■□□□ 1.6
DDR1-269ENST00000512725 SLAIN2Q9P270 581 aa25.02■■□□□ 1.6
DDR1-269ENST00000512725 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
DDR1-269ENST00000512725 PHLPP1O60346 1717 aa25.02■■□□□ 1.6
DDR1-269ENST00000512725 TET3O43151 1660 aa25.01■■□□□ 1.59
DDR1-269ENST00000512725 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
DDR1-269ENST00000512725 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
DDR1-269ENST00000512725 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
DDR1-269ENST00000512725 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms