RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
PROM1-213ENST00000512304 POTEAQ6S8J7 498 aa15.18■□□□□ 0.02
PROM1-213ENST00000512304 CPS1P31327 1500 aa15.17■□□□□ 0.02
PROM1-213ENST00000512304 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
PROM1-213ENST00000512304 TNRQ92752 1358 aa15.16■□□□□ 0.02
PROM1-213ENST00000512304 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
PROM1-213ENST00000512304 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
PROM1-213ENST00000512304 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
PROM1-213ENST00000512304 CFDP1Q9UEE9 299 aaPredicted RBP15.13■□□□□ 0.01
PROM1-213ENST00000512304 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
PROM1-213ENST00000512304 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
PROM1-213ENST00000512304 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
PROM1-213ENST00000512304 LRRC7Q96NW7 1537 aa15.12■□□□□ 0.01
PROM1-213ENST00000512304 KIF3BO15066 747 aa15.1■□□□□ 0.01
PROM1-213ENST00000512304 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
PROM1-213ENST00000512304 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
PROM1-213ENST00000512304 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
PROM1-213ENST00000512304 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
PROM1-213ENST00000512304 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
PROM1-213ENST00000512304 MIA2Q96PC5 1412 aa15.06■□□□□ 0
PROM1-213ENST00000512304 MBD5Q9P267 1494 aa15.06■□□□□ 0
PROM1-213ENST00000512304 CCNB3Q8WWL7 1395 aa15.05■□□□□ -0
PROM1-213ENST00000512304 MED14O60244 1454 aa15.05■□□□□ -0
PROM1-213ENST00000512304 PZPP20742 1482 aa15.05■□□□□ -0
PROM1-213ENST00000512304 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
PROM1-213ENST00000512304 RBM33Q96EV2 1170 aaKnown RBP15.04■□□□□ -0
PROM1-213ENST00000512304 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
PROM1-213ENST00000512304 UGGT1Q9NYU2 1555 aa15.02□□□□□ -0.01
PROM1-213ENST00000512304 LTKP29376 864 aa15.01□□□□□ -0.01
PROM1-213ENST00000512304 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
PROM1-213ENST00000512304 PLEKHH2Q8IVE3 1493 aa15□□□□□ -0.01
PROM1-213ENST00000512304 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
PROM1-213ENST00000512304 FYCO1Q9BQS8 1478 aa14.98□□□□□ -0.01
PROM1-213ENST00000512304 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
PROM1-213ENST00000512304 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
PROM1-213ENST00000512304 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
PROM1-213ENST00000512304 IQGAP1P46940 1657 aa14.97□□□□□ -0.01
PROM1-213ENST00000512304 DEPDC5O75140 1603 aa14.96□□□□□ -0.01
PROM1-213ENST00000512304 SETD1AO15047 1707 aaKnown RBP14.96□□□□□ -0.01
PROM1-213ENST00000512304 RTEL1-TNFRSF6BF6WH68 1400 aa14.95□□□□□ -0.02
PROM1-213ENST00000512304 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
PROM1-213ENST00000512304 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
PROM1-213ENST00000512304 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
PROM1-213ENST00000512304 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
PROM1-213ENST00000512304 SRCAPQ6ZRS2 3230 aa14.92□□□□□ -0.02
PROM1-213ENST00000512304 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
PROM1-213ENST00000512304 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
PROM1-213ENST00000512304 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
PROM1-213ENST00000512304 UPF1Q92900 1129 aaKnown RBP eCLIP14.91□□□□□ -0.02
PROM1-213ENST00000512304 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
PROM1-213ENST00000512304 ZC3H13Q5T200 1668 aaKnown RBP14.9□□□□□ -0.02
PROM1-213ENST00000512304 SYNMO15061 1565 aa14.9□□□□□ -0.02
PROM1-213ENST00000512304 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
PROM1-213ENST00000512304 ABCC3O15438 1527 aa14.89□□□□□ -0.03
PROM1-213ENST00000512304 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
PROM1-213ENST00000512304 CCDC141Q6ZP82 1450 aa14.88□□□□□ -0.03
PROM1-213ENST00000512304 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
PROM1-213ENST00000512304 XIRP1Q702N8 1843 aaKnown RBP14.86□□□□□ -0.03
PROM1-213ENST00000512304 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
PROM1-213ENST00000512304 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
PROM1-213ENST00000512304 ARHGAP23Q9P227 1491 aa14.84□□□□□ -0.03
PROM1-213ENST00000512304 MAP3K1Q13233 1512 aa14.84□□□□□ -0.03
PROM1-213ENST00000512304 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
PROM1-213ENST00000512304 LRP6O75581 1613 aa14.84□□□□□ -0.03
PROM1-213ENST00000512304 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
PROM1-213ENST00000512304 ROBO1Q9Y6N7 1651 aa14.82□□□□□ -0.04
PROM1-213ENST00000512304 KCNA6P17658 529 aa14.81□□□□□ -0.04
PROM1-213ENST00000512304 MROH1Q8NDA8 1641 aa14.81□□□□□ -0.04
PROM1-213ENST00000512304 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
PROM1-213ENST00000512304 SLIT1O75093 1534 aa14.8□□□□□ -0.04
PROM1-213ENST00000512304 SLAIN2Q9P270 581 aa14.79□□□□□ -0.04
PROM1-213ENST00000512304 TMEM2Q9UHN6 1383 aa14.79□□□□□ -0.04
PROM1-213ENST00000512304 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
PROM1-213ENST00000512304 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
PROM1-213ENST00000512304 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
PROM1-213ENST00000512304 EHBP1L1Q8N3D4 1523 aa14.77□□□□□ -0.04
PROM1-213ENST00000512304 JCADQ9P266 1359 aa14.77□□□□□ -0.04
PROM1-213ENST00000512304 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
PROM1-213ENST00000512304 IDI1Q13907 227 aa14.76□□□□□ -0.05
PROM1-213ENST00000512304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
PROM1-213ENST00000512304 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
PROM1-213ENST00000512304 RSPH4AQ5TD94 716 aa14.74□□□□□ -0.05
PROM1-213ENST00000512304 PRDM15P57071 1507 aaPredicted RBP14.72□□□□□ -0.05
PROM1-213ENST00000512304 TET3O43151 1660 aa14.72□□□□□ -0.05
PROM1-213ENST00000512304 NUTM2BA6NNL0 878 aaPredicted RBP14.72□□□□□ -0.05
PROM1-213ENST00000512304 NUTM2EB1AL46 878 aaPredicted RBP14.72□□□□□ -0.05
PROM1-213ENST00000512304 NUTM2AQ8IVF1 878 aaPredicted RBP14.72□□□□□ -0.05
PROM1-213ENST00000512304 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
PROM1-213ENST00000512304 PIK3C2BO00750 1634 aa14.72□□□□□ -0.05
PROM1-213ENST00000512304 CEP152O94986 1710 aa14.72□□□□□ -0.05
PROM1-213ENST00000512304 RXRBP28702 533 aa14.71□□□□□ -0.05
PROM1-213ENST00000512304 BCANQ96GW7 911 aa14.71□□□□□ -0.05
PROM1-213ENST00000512304 ARHGEF5Q12774 1597 aa14.71□□□□□ -0.05
PROM1-213ENST00000512304 MSH6P52701 1360 aa14.71□□□□□ -0.06
PROM1-213ENST00000512304 ZNF772Q68DY9 489 aaPredicted RBP14.7□□□□□ -0.06
PROM1-213ENST00000512304 RRP7BPQ9NSQ0 103 aa14.7□□□□□ -0.06
PROM1-213ENST00000512304 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
PROM1-213ENST00000512304 COL16A1Q07092 1604 aaPredicted RBP14.7□□□□□ -0.06
PROM1-213ENST00000512304 PHLPP1O60346 1717 aa14.69□□□□□ -0.06
PROM1-213ENST00000512304 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms