RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 RNF17Q9BXT8 1623 aaKnown RBP30.76■■■□□ 2.52
HOXC6-204ENST00000509328 MROH2AA6NES4 1674 aa30.76■■■□□ 2.51
HOXC6-204ENST00000509328 CLTCQ00610 1675 aaKnown RBP30.75■■■□□ 2.51
HOXC6-204ENST00000509328 ITGAEP38570 1179 aa30.74■■■□□ 2.51
HOXC6-204ENST00000509328 ROCK1Q13464 1354 aa30.73■■■□□ 2.51
HOXC6-204ENST00000509328 FAM135AQ9P2D6 1515 aa30.72■■■□□ 2.51
HOXC6-204ENST00000509328 C3P01024 1663 aa30.71■■■□□ 2.51
HOXC6-204ENST00000509328 PLPPR3Q6T4P5 718 aa30.67■■■□□ 2.5
HOXC6-204ENST00000509328 KDM5DQ9BY66 1539 aa30.67■■■□□ 2.5
HOXC6-204ENST00000509328 MROH1Q8NDA8 1641 aa30.66■■■□□ 2.5
HOXC6-204ENST00000509328 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
HOXC6-204ENST00000509328 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
HOXC6-204ENST00000509328 ZC3H13Q5T200 1668 aaKnown RBP30.64■■■□□ 2.5
HOXC6-204ENST00000509328 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.49
HOXC6-204ENST00000509328 ZMYM3Q14202 1370 aa30.63■■■□□ 2.49
HOXC6-204ENST00000509328 PRDM15P57071 1507 aaPredicted RBP30.62■■■□□ 2.49
HOXC6-204ENST00000509328 WASHC2CQ9Y4E1 1318 aa30.61■■■□□ 2.49
HOXC6-204ENST00000509328 SETD1BQ9UPS6 1966 aaKnown RBP30.6■■■□□ 2.49
HOXC6-204ENST00000509328 CEP152O94986 1710 aa30.58■■■□□ 2.49
HOXC6-204ENST00000509328 ABCC3O15438 1527 aa30.57■■■□□ 2.49
HOXC6-204ENST00000509328 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
HOXC6-204ENST00000509328 KANK1Q14678 1352 aa30.53■■■□□ 2.48
HOXC6-204ENST00000509328 GCC2Q8IWJ2 1684 aa30.52■■■□□ 2.48
HOXC6-204ENST00000509328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.52■■■□□ 2.48
HOXC6-204ENST00000509328 NPATQ14207 1427 aa30.52■■■□□ 2.48
HOXC6-204ENST00000509328 CAMSAP1Q5T5Y3 1602 aa30.51■■■□□ 2.48
HOXC6-204ENST00000509328 VWDEQ8N2E2 1590 aa30.5■■■□□ 2.47
HOXC6-204ENST00000509328 UNC13BO14795 1591 aa30.49■■■□□ 2.47
HOXC6-204ENST00000509328 PZPP20742 1482 aa30.49■■■□□ 2.47
HOXC6-204ENST00000509328 NAIPQ13075 1403 aa30.47■■■□□ 2.47
HOXC6-204ENST00000509328 LMTK3Q96Q04 1460 aa30.46■■■□□ 2.47
HOXC6-204ENST00000509328 LMTK2Q8IWU2 1503 aa30.45■■■□□ 2.47
HOXC6-204ENST00000509328 HFM1A2PYH4 1435 aa30.45■■■□□ 2.46
HOXC6-204ENST00000509328 CFAP65Q6ZU64 1925 aaKnown RBP30.42■■■□□ 2.46
HOXC6-204ENST00000509328 UHRF1BP1Q6BDS2 1440 aa30.42■■■□□ 2.46
HOXC6-204ENST00000509328 ARHGAP31Q2M1Z3 1444 aa30.39■■■□□ 2.46
HOXC6-204ENST00000509328 MYO3AQ8NEV4 1616 aa30.39■■■□□ 2.46
HOXC6-204ENST00000509328 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
HOXC6-204ENST00000509328 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
HOXC6-204ENST00000509328 TET3O43151 1660 aa30.36■■■□□ 2.45
HOXC6-204ENST00000509328 EFCAB6Q5THR3 1501 aa30.36■■■□□ 2.45
HOXC6-204ENST00000509328 TNRQ92752 1358 aa30.35■■■□□ 2.45
HOXC6-204ENST00000509328 SPATA31D1Q6ZQQ2 1576 aa30.35■■■□□ 2.45
HOXC6-204ENST00000509328 ZNF142P52746 1687 aaPredicted RBP30.33■■■□□ 2.45
HOXC6-204ENST00000509328 ERVK-7P63135 1459 aa30.33■■■□□ 2.45
HOXC6-204ENST00000509328 NUP155O75694 1391 aa30.32■■■□□ 2.44
HOXC6-204ENST00000509328 CEP170BQ9Y4F5 1589 aaPredicted RBP30.28■■■□□ 2.44
HOXC6-204ENST00000509328 HSPA2P54652 639 aa30.28■■■□□ 2.44
HOXC6-204ENST00000509328 RPRD2Q5VT52 1461 aaKnown RBP30.27■■■□□ 2.44
HOXC6-204ENST00000509328 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
HOXC6-204ENST00000509328 NLRP1Q9C000 1473 aa30.25■■■□□ 2.43
HOXC6-204ENST00000509328 E9PCH4 1651 aa30.24■■■□□ 2.43
HOXC6-204ENST00000509328 SETD5Q9C0A6 1442 aa30.21■■■□□ 2.43
HOXC6-204ENST00000509328 NOS1P29475 1434 aa30.19■■■□□ 2.42
HOXC6-204ENST00000509328 TRIM52Q96A61 297 aa30.18■■■□□ 2.42
HOXC6-204ENST00000509328 SYNMO15061 1565 aa30.17■■■□□ 2.42
HOXC6-204ENST00000509328 STRCQ7RTU9 1775 aa30.15■■■□□ 2.42
HOXC6-204ENST00000509328 UGGT1Q9NYU2 1555 aa30.15■■■□□ 2.42
HOXC6-204ENST00000509328 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
HOXC6-204ENST00000509328 UBR1Q8IWV7 1749 aa30.11■■■□□ 2.41
HOXC6-204ENST00000509328 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
HOXC6-204ENST00000509328 PLA2R1Q13018 1463 aa30.1■■■□□ 2.41
HOXC6-204ENST00000509328 RAB3GAP2Q9H2M9 1393 aa30.09■■■□□ 2.41
HOXC6-204ENST00000509328 SPHKAPQ2M3C7 1700 aa30.08■■■□□ 2.41
HOXC6-204ENST00000509328 KDM5AP29375 1690 aaKnown RBP30.08■■■□□ 2.41
HOXC6-204ENST00000509328 THEMISQ8N1K5 641 aaPredicted RBP30.08■■■□□ 2.41
HOXC6-204ENST00000509328 SLC52A1Q9NWF4 448 aa30.07■■■□□ 2.4
HOXC6-204ENST00000509328 IDI1Q13907 227 aa30.05■■■□□ 2.4
HOXC6-204ENST00000509328 SLC4A1APQ9BWU0 796 aaKnown RBP30.05■■■□□ 2.4
HOXC6-204ENST00000509328 POLR1AO95602 1720 aaPredicted RBP30.02■■■□□ 2.4
HOXC6-204ENST00000509328 PKD2Q13563 968 aa30.02■■■□□ 2.4
HOXC6-204ENST00000509328 PTPRTO14522 1441 aa30.01■■■□□ 2.39
HOXC6-204ENST00000509328 DMRT2Q9Y5R5 561 aa30■■■□□ 2.39
HOXC6-204ENST00000509328 ADGRB3O60242 1522 aa30■■■□□ 2.39
HOXC6-204ENST00000509328 HRCP23327 699 aa29.99■■■□□ 2.39
HOXC6-204ENST00000509328 STAG3Q9UJ98 1225 aa29.99■■■□□ 2.39
HOXC6-204ENST00000509328 MYO5BQ9ULV0 1848 aa29.98■■■□□ 2.39
HOXC6-204ENST00000509328 NCKAP5LQ9HCH0 1330 aa29.97■■■□□ 2.39
HOXC6-204ENST00000509328 MPHOSPH9Q99550 1183 aa29.97■■■□□ 2.39
HOXC6-204ENST00000509328 TRPM2O94759 1503 aa29.96■■■□□ 2.39
HOXC6-204ENST00000509328 TMEM131LA2VDJ0 1609 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 ANKLE2Q86XL3 938 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 SLIT1O75093 1534 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
HOXC6-204ENST00000509328 ARHGAP23Q9P227 1491 aa29.93■■■□□ 2.38
HOXC6-204ENST00000509328 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
HOXC6-204ENST00000509328 CLTCL1P53675 1640 aa29.9■■■□□ 2.38
HOXC6-204ENST00000509328 TMEM2Q9UHN6 1383 aa29.9■■■□□ 2.38
HOXC6-204ENST00000509328 KIF1BO60333 1816 aa29.87■■■□□ 2.37
HOXC6-204ENST00000509328 FOXD1Q16676 465 aa29.86■■■□□ 2.37
HOXC6-204ENST00000509328 MED14O60244 1454 aa29.86■■■□□ 2.37
HOXC6-204ENST00000509328 SCAF11Q99590 1463 aaKnown RBP29.86■■■□□ 2.37
HOXC6-204ENST00000509328 CHGAP10645 457 aaKnown RBP29.85■■■□□ 2.37
HOXC6-204ENST00000509328 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
HOXC6-204ENST00000509328 IQGAP1P46940 1657 aa29.84■■■□□ 2.37
HOXC6-204ENST00000509328 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
HOXC6-204ENST00000509328 NPHP4O75161 1426 aaPredicted RBP29.82■■■□□ 2.36
HOXC6-204ENST00000509328 LTKP29376 864 aa29.81■■■□□ 2.36
HOXC6-204ENST00000509328 ZFYVE9O95405 1425 aa29.78■■■□□ 2.36
HOXC6-204ENST00000509328 RIMS2Q9UQ26 1411 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms