RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ZNF772Q68DY9 489 aaPredicted RBP6.45□□□□□ -1.38
RNF4-211ENST00000509206 RBM42Q9BTD8 480 aaKnown RBP6.45□□□□□ -1.38
RNF4-211ENST00000509206 SPAG9O60271 1321 aaKnown RBP6.45□□□□□ -1.38
RNF4-211ENST00000509206 CEP170BQ9Y4F5 1589 aaPredicted RBP6.44□□□□□ -1.38
RNF4-211ENST00000509206 RXRBP28702 533 aa6.44□□□□□ -1.38
RNF4-211ENST00000509206 PRXQ9BXM0 1461 aa6.44□□□□□ -1.38
RNF4-211ENST00000509206 REREQ9P2R6 1566 aa6.44□□□□□ -1.38
RNF4-211ENST00000509206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
RNF4-211ENST00000509206 NPHP4O75161 1426 aaPredicted RBP6.43□□□□□ -1.38
RNF4-211ENST00000509206 A2ML1A8K2U0 1454 aa6.43□□□□□ -1.38
RNF4-211ENST00000509206 ZRANB1Q9UGI0 708 aa6.43□□□□□ -1.38
RNF4-211ENST00000509206 CLIP1P30622 1438 aa6.42□□□□□ -1.38
RNF4-211ENST00000509206 FBXO31Q5XUX0 539 aaPredicted RBP6.42□□□□□ -1.38
RNF4-211ENST00000509206 KDM5CP41229 1560 aa6.42□□□□□ -1.38
RNF4-211ENST00000509206 TNRQ92752 1358 aa6.42□□□□□ -1.38
RNF4-211ENST00000509206 SAMD9Q5K651 1589 aa6.41□□□□□ -1.38
RNF4-211ENST00000509206 ABCA6Q8N139 1617 aa6.41□□□□□ -1.38
RNF4-211ENST00000509206 MYO3AQ8NEV4 1616 aa6.41□□□□□ -1.38
RNF4-211ENST00000509206 NUTM2BA6NNL0 878 aaPredicted RBP6.41□□□□□ -1.38
RNF4-211ENST00000509206 NUTM2EB1AL46 878 aaPredicted RBP6.41□□□□□ -1.38
RNF4-211ENST00000509206 NUTM2DQ5VT03 806 aaPredicted RBP6.41□□□□□ -1.38
RNF4-211ENST00000509206 NUTM2AQ8IVF1 878 aaPredicted RBP6.41□□□□□ -1.38
RNF4-211ENST00000509206 MYO5CQ9NQX4 1742 aa6.41□□□□□ -1.38
RNF4-211ENST00000509206 CDK13Q14004 1512 aaKnown RBP6.4□□□□□ -1.38
RNF4-211ENST00000509206 MROH2AA6NES4 1674 aa6.4□□□□□ -1.38
RNF4-211ENST00000509206 HNRNPMP52272 730 aaKnown RBP eCLIP6.4□□□□□ -1.38
RNF4-211ENST00000509206 FAM135BQ49AJ0 1406 aa6.4□□□□□ -1.39
RNF4-211ENST00000509206 LRRC7Q96NW7 1537 aa6.4□□□□□ -1.39
RNF4-211ENST00000509206 FAM135AQ9P2D6 1515 aa6.4□□□□□ -1.39
RNF4-211ENST00000509206 ZNF142P52746 1687 aaPredicted RBP6.39□□□□□ -1.39
RNF4-211ENST00000509206 SETD1AO15047 1707 aaKnown RBP6.39□□□□□ -1.39
RNF4-211ENST00000509206 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
RNF4-211ENST00000509206 JCADQ9P266 1359 aa6.39□□□□□ -1.39
RNF4-211ENST00000509206 DNMT1P26358 1616 aaKnown RBP6.39□□□□□ -1.39
RNF4-211ENST00000509206 CLTCQ00610 1675 aaKnown RBP6.39□□□□□ -1.39
RNF4-211ENST00000509206 MKRN4PQ13434 485 aaPredicted RBP6.38□□□□□ -1.39
RNF4-211ENST00000509206 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
RNF4-211ENST00000509206 RBM33Q96EV2 1170 aaKnown RBP6.38□□□□□ -1.39
RNF4-211ENST00000509206 TROQ12816 1431 aaPredicted RBP6.38□□□□□ -1.39
RNF4-211ENST00000509206 VWDEQ8N2E2 1590 aa6.38□□□□□ -1.39
RNF4-211ENST00000509206 ALKQ9UM73 1620 aa6.38□□□□□ -1.39
RNF4-211ENST00000509206 KIF14Q15058 1648 aa6.37□□□□□ -1.39
RNF4-211ENST00000509206 RNF17Q9BXT8 1623 aaKnown RBP6.37□□□□□ -1.39
RNF4-211ENST00000509206 SPDYE4A6NLX3 237 aa6.37□□□□□ -1.39
RNF4-211ENST00000509206 KIF3BO15066 747 aa6.37□□□□□ -1.39
RNF4-211ENST00000509206 TXNDC2Q86VQ3 553 aa6.37□□□□□ -1.39
RNF4-211ENST00000509206 EID1Q9Y6B2 187 aa6.37□□□□□ -1.39
RNF4-211ENST00000509206 ABCC1P33527 1531 aa6.36□□□□□ -1.39
RNF4-211ENST00000509206 A2MP01023 1474 aa6.36□□□□□ -1.39
RNF4-211ENST00000509206 SPATA31A6Q5VVP1 1343 aa6.36□□□□□ -1.39
RNF4-211ENST00000509206 BCANQ96GW7 911 aa6.36□□□□□ -1.39
RNF4-211ENST00000509206 POLR1AO95602 1720 aaPredicted RBP6.36□□□□□ -1.39
RNF4-211ENST00000509206 NEURL4Q96JN8 1562 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 MED14O60244 1454 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 FMN1Q68DA7 1419 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 MIA2Q96PC5 1412 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 SLC24A1O60721 1099 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 UBTFP17480 764 aaKnown RBP6.35□□□□□ -1.39
RNF4-211ENST00000509206 SLAIN2Q9P270 581 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 CFDP1Q9UEE9 299 aaPredicted RBP6.35□□□□□ -1.39
RNF4-211ENST00000509206 STAG3Q9UJ98 1225 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 SRCAPQ6ZRS2 3230 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 UGGT1Q9NYU2 1555 aa6.35□□□□□ -1.39
RNF4-211ENST00000509206 KIDINS220Q9ULH0 1771 aa6.34□□□□□ -1.39
RNF4-211ENST00000509206 SPDYE2BA6NHP3 402 aa6.34□□□□□ -1.39
RNF4-211ENST00000509206 SPDYE6P0CI01 402 aa6.34□□□□□ -1.39
RNF4-211ENST00000509206 SPDYE2Q495Y8 402 aa6.34□□□□□ -1.39
RNF4-211ENST00000509206 C14orf37Q86TY3 774 aa6.34□□□□□ -1.39
RNF4-211ENST00000509206 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
RNF4-211ENST00000509206 NLRP1Q9C000 1473 aa6.34□□□□□ -1.4
RNF4-211ENST00000509206 TMEM94Q12767 1356 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 SYNMO15061 1565 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 KCNA6P17658 529 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 RBM6P78332 1123 aaKnown RBP6.33□□□□□ -1.4
RNF4-211ENST00000509206 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 ZNF692Q9BU19 519 aaPredicted RBP6.33□□□□□ -1.4
RNF4-211ENST00000509206 FBXO3Q9UK99 471 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 IQGAP1P46940 1657 aa6.33□□□□□ -1.4
RNF4-211ENST00000509206 MSH6P52701 1360 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 SAMD9LQ8IVG5 1584 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 AFF2P51816 1311 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 KDM5DQ9BY66 1539 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 AKT1S1Q96B36 256 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
RNF4-211ENST00000509206 PZPP20742 1482 aa6.31□□□□□ -1.4
RNF4-211ENST00000509206 DEPDC5O75140 1603 aa6.31□□□□□ -1.4
RNF4-211ENST00000509206 ATAD2Q6PL18 1390 aa6.31□□□□□ -1.4
RNF4-211ENST00000509206 DHX29Q7Z478 1369 aaKnown RBP6.31□□□□□ -1.4
RNF4-211ENST00000509206 CDC42BPBQ9Y5S2 1711 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 ATP7AQ04656 1500 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 LTKP29376 864 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 ROBO1Q9Y6N7 1651 aa6.3□□□□□ -1.4
RNF4-211ENST00000509206 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 CDK12Q9NYV4 1490 aaPredicted RBP6.29□□□□□ -1.4
RNF4-211ENST00000509206 PROM2Q8N271 834 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 KIAA1107Q9UPP5 1409 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms