RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
SNCA-211ENST00000508895 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
SNCA-211ENST00000508895 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
SNCA-211ENST00000508895 RNF17Q9BXT8 1623 aaKnown RBP13.52□□□□□ -0.25
SNCA-211ENST00000508895 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.25
SNCA-211ENST00000508895 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
SNCA-211ENST00000508895 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
SNCA-211ENST00000508895 CEP152O94986 1710 aa13.5□□□□□ -0.25
SNCA-211ENST00000508895 RRP7BPQ9NSQ0 103 aa13.5□□□□□ -0.25
SNCA-211ENST00000508895 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
SNCA-211ENST00000508895 UHRF1BP1Q6BDS2 1440 aa13.49□□□□□ -0.25
SNCA-211ENST00000508895 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
SNCA-211ENST00000508895 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
SNCA-211ENST00000508895 ABCC3O15438 1527 aa13.48□□□□□ -0.25
SNCA-211ENST00000508895 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
SNCA-211ENST00000508895 DUOX2Q9NRD8 1548 aa13.48□□□□□ -0.25
SNCA-211ENST00000508895 NPATQ14207 1427 aa13.47□□□□□ -0.25
SNCA-211ENST00000508895 KIF15Q9NS87 1388 aa13.47□□□□□ -0.25
SNCA-211ENST00000508895 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
SNCA-211ENST00000508895 FAM50AQ14320 339 aaKnown RBP13.47□□□□□ -0.25
SNCA-211ENST00000508895 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
SNCA-211ENST00000508895 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
SNCA-211ENST00000508895 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
SNCA-211ENST00000508895 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
SNCA-211ENST00000508895 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
SNCA-211ENST00000508895 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
SNCA-211ENST00000508895 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
SNCA-211ENST00000508895 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
SNCA-211ENST00000508895 PZPP20742 1482 aa13.43□□□□□ -0.26
SNCA-211ENST00000508895 DEPDC5O75140 1603 aa13.43□□□□□ -0.26
SNCA-211ENST00000508895 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
SNCA-211ENST00000508895 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
SNCA-211ENST00000508895 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
SNCA-211ENST00000508895 VWDEQ8N2E2 1590 aa13.41□□□□□ -0.26
SNCA-211ENST00000508895 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
SNCA-211ENST00000508895 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
SNCA-211ENST00000508895 TNRQ92752 1358 aa13.4□□□□□ -0.26
SNCA-211ENST00000508895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNCA-211ENST00000508895 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
SNCA-211ENST00000508895 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
SNCA-211ENST00000508895 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
SNCA-211ENST00000508895 ITGAEP38570 1179 aa13.36□□□□□ -0.27
SNCA-211ENST00000508895 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
SNCA-211ENST00000508895 PTPRTO14522 1441 aa13.35□□□□□ -0.27
SNCA-211ENST00000508895 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
SNCA-211ENST00000508895 ANKRD50Q9ULJ7 1429 aa13.34□□□□□ -0.27
SNCA-211ENST00000508895 SYNMO15061 1565 aa13.33□□□□□ -0.28
SNCA-211ENST00000508895 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.28
SNCA-211ENST00000508895 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
SNCA-211ENST00000508895 LMTK2Q8IWU2 1503 aa13.33□□□□□ -0.28
SNCA-211ENST00000508895 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.28
SNCA-211ENST00000508895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNCA-211ENST00000508895 ARHGAP31Q2M1Z3 1444 aa13.32□□□□□ -0.28
SNCA-211ENST00000508895 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
SNCA-211ENST00000508895 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
SNCA-211ENST00000508895 UNC13BO14795 1591 aa13.31□□□□□ -0.28
SNCA-211ENST00000508895 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
SNCA-211ENST00000508895 PIK3C2BO00750 1634 aa13.31□□□□□ -0.28
SNCA-211ENST00000508895 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
SNCA-211ENST00000508895 EFCAB6Q5THR3 1501 aa13.3□□□□□ -0.28
SNCA-211ENST00000508895 ZNF335Q9H4Z2 1342 aaPredicted RBP13.3□□□□□ -0.28
SNCA-211ENST00000508895 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
SNCA-211ENST00000508895 MYO5BQ9ULV0 1848 aa13.29□□□□□ -0.28
SNCA-211ENST00000508895 NOS1P29475 1434 aa13.28□□□□□ -0.28
SNCA-211ENST00000508895 E9PCH4 1651 aa13.28□□□□□ -0.28
SNCA-211ENST00000508895 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.28
SNCA-211ENST00000508895 TET3O43151 1660 aa13.27□□□□□ -0.29
SNCA-211ENST00000508895 PKD2Q13563 968 aa13.26□□□□□ -0.29
SNCA-211ENST00000508895 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
SNCA-211ENST00000508895 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
SNCA-211ENST00000508895 KANK1Q14678 1352 aa13.25□□□□□ -0.29
SNCA-211ENST00000508895 LTKP29376 864 aa13.25□□□□□ -0.29
SNCA-211ENST00000508895 IDI1Q13907 227 aa13.25□□□□□ -0.29
SNCA-211ENST00000508895 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
SNCA-211ENST00000508895 NAIPQ13075 1403 aa13.23□□□□□ -0.29
SNCA-211ENST00000508895 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
SNCA-211ENST00000508895 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
SNCA-211ENST00000508895 MED14O60244 1454 aa13.23□□□□□ -0.29
SNCA-211ENST00000508895 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
SNCA-211ENST00000508895 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
SNCA-211ENST00000508895 SLIT1O75093 1534 aa13.21□□□□□ -0.29
SNCA-211ENST00000508895 NUP155O75694 1391 aa13.2□□□□□ -0.3
SNCA-211ENST00000508895 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
SNCA-211ENST00000508895 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
SNCA-211ENST00000508895 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
SNCA-211ENST00000508895 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
SNCA-211ENST00000508895 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
SNCA-211ENST00000508895 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
SNCA-211ENST00000508895 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
SNCA-211ENST00000508895 TXNDC2Q86VQ3 553 aa13.17□□□□□ -0.3
SNCA-211ENST00000508895 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
SNCA-211ENST00000508895 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
SNCA-211ENST00000508895 HFM1A2PYH4 1435 aa13.15□□□□□ -0.3
SNCA-211ENST00000508895 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
SNCA-211ENST00000508895 ZFYVE9O95405 1425 aa13.14□□□□□ -0.31
SNCA-211ENST00000508895 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
SNCA-211ENST00000508895 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SNCA-211ENST00000508895 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
SNCA-211ENST00000508895 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
SNCA-211ENST00000508895 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms