RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
COPS4-205ENST00000507376 STRCP1A6NGW2 1772 aa14.88□□□□□ -0.03
COPS4-205ENST00000507376 HNRNPMP52272 730 aaKnown RBP eCLIP14.88□□□□□ -0.03
COPS4-205ENST00000507376 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
COPS4-205ENST00000507376 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
COPS4-205ENST00000507376 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
COPS4-205ENST00000507376 GGT6Q6P531 493 aa14.83□□□□□ -0.04
COPS4-205ENST00000507376 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
COPS4-205ENST00000507376 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
COPS4-205ENST00000507376 PKD2Q13563 968 aa14.82□□□□□ -0.04
COPS4-205ENST00000507376 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
COPS4-205ENST00000507376 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
COPS4-205ENST00000507376 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
COPS4-205ENST00000507376 CPS1P31327 1500 aa14.81□□□□□ -0.04
COPS4-205ENST00000507376 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
COPS4-205ENST00000507376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
COPS4-205ENST00000507376 IQGAP1P46940 1657 aa14.77□□□□□ -0.05
COPS4-205ENST00000507376 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
COPS4-205ENST00000507376 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
COPS4-205ENST00000507376 TNRQ92752 1358 aa14.76□□□□□ -0.05
COPS4-205ENST00000507376 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
COPS4-205ENST00000507376 PZPP20742 1482 aa14.76□□□□□ -0.05
COPS4-205ENST00000507376 RNF17Q9BXT8 1623 aaKnown RBP14.75□□□□□ -0.05
COPS4-205ENST00000507376 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
COPS4-205ENST00000507376 SETD1AO15047 1707 aaKnown RBP14.74□□□□□ -0.05
COPS4-205ENST00000507376 ZC3H13Q5T200 1668 aaKnown RBP14.74□□□□□ -0.05
COPS4-205ENST00000507376 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
COPS4-205ENST00000507376 XIRP1Q702N8 1843 aaKnown RBP14.73□□□□□ -0.05
COPS4-205ENST00000507376 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
COPS4-205ENST00000507376 PLEKHH2Q8IVE3 1493 aa14.73□□□□□ -0.05
COPS4-205ENST00000507376 NPHP4O75161 1426 aaPredicted RBP14.73□□□□□ -0.05
COPS4-205ENST00000507376 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
COPS4-205ENST00000507376 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
COPS4-205ENST00000507376 DEPDC5O75140 1603 aa14.72□□□□□ -0.05
COPS4-205ENST00000507376 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
COPS4-205ENST00000507376 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
COPS4-205ENST00000507376 SYNMO15061 1565 aa14.71□□□□□ -0.05
COPS4-205ENST00000507376 TOM1O60784 492 aa14.7□□□□□ -0.06
COPS4-205ENST00000507376 MED14O60244 1454 aa14.69□□□□□ -0.06
COPS4-205ENST00000507376 CEP152O94986 1710 aa14.68□□□□□ -0.06
COPS4-205ENST00000507376 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
COPS4-205ENST00000507376 DHX29Q7Z478 1369 aaKnown RBP14.67□□□□□ -0.06
COPS4-205ENST00000507376 CAMSAP2Q08AD1 1489 aa14.67□□□□□ -0.06
COPS4-205ENST00000507376 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
COPS4-205ENST00000507376 KIF3BO15066 747 aa14.66□□□□□ -0.06
COPS4-205ENST00000507376 UBR1Q8IWV7 1749 aa14.66□□□□□ -0.06
COPS4-205ENST00000507376 ABCC3O15438 1527 aa14.66□□□□□ -0.06
COPS4-205ENST00000507376 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
COPS4-205ENST00000507376 CCDC141Q6ZP82 1450 aa14.65□□□□□ -0.06
COPS4-205ENST00000507376 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
COPS4-205ENST00000507376 CFAP65Q6ZU64 1925 aaKnown RBP14.65□□□□□ -0.06
COPS4-205ENST00000507376 NLRP1Q9C000 1473 aa14.64□□□□□ -0.07
COPS4-205ENST00000507376 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
COPS4-205ENST00000507376 RTEL1-TNFRSF6BF6WH68 1400 aa14.63□□□□□ -0.07
COPS4-205ENST00000507376 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
COPS4-205ENST00000507376 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
COPS4-205ENST00000507376 NCOA2Q15596 1464 aa14.62□□□□□ -0.07
COPS4-205ENST00000507376 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
COPS4-205ENST00000507376 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
COPS4-205ENST00000507376 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
COPS4-205ENST00000507376 POTEAQ6S8J7 498 aa14.59□□□□□ -0.07
COPS4-205ENST00000507376 WASHC2CQ9Y4E1 1318 aa14.59□□□□□ -0.07
COPS4-205ENST00000507376 ROBO1Q9Y6N7 1651 aa14.57□□□□□ -0.08
COPS4-205ENST00000507376 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
COPS4-205ENST00000507376 MAP3K1Q13233 1512 aa14.56□□□□□ -0.08
COPS4-205ENST00000507376 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
COPS4-205ENST00000507376 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
COPS4-205ENST00000507376 THEMISQ8N1K5 641 aaPredicted RBP14.55□□□□□ -0.08
COPS4-205ENST00000507376 ARHGAP23Q9P227 1491 aa14.55□□□□□ -0.08
COPS4-205ENST00000507376 LTKP29376 864 aa14.54□□□□□ -0.08
COPS4-205ENST00000507376 RBM33Q96EV2 1170 aaKnown RBP14.54□□□□□ -0.08
COPS4-205ENST00000507376 EIF2AK4Q9P2K8 1649 aaKnown RBP14.53□□□□□ -0.08
COPS4-205ENST00000507376 SLIT1O75093 1534 aa14.52□□□□□ -0.08
COPS4-205ENST00000507376 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
COPS4-205ENST00000507376 PRDM15P57071 1507 aaPredicted RBP14.48□□□□□ -0.09
COPS4-205ENST00000507376 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
COPS4-205ENST00000507376 PHLPP1O60346 1717 aa14.47□□□□□ -0.09
COPS4-205ENST00000507376 LRP6O75581 1613 aa14.47□□□□□ -0.09
COPS4-205ENST00000507376 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.1
COPS4-205ENST00000507376 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
COPS4-205ENST00000507376 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
COPS4-205ENST00000507376 COL16A1Q07092 1604 aaPredicted RBP14.44□□□□□ -0.1
COPS4-205ENST00000507376 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
COPS4-205ENST00000507376 TXNDC2Q86VQ3 553 aa14.43□□□□□ -0.1
COPS4-205ENST00000507376 MYO5BQ9ULV0 1848 aa14.43□□□□□ -0.1
COPS4-205ENST00000507376 TET3O43151 1660 aa14.42□□□□□ -0.1
COPS4-205ENST00000507376 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
COPS4-205ENST00000507376 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
COPS4-205ENST00000507376 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
COPS4-205ENST00000507376 DUOX2Q9NRD8 1548 aa14.4□□□□□ -0.1
COPS4-205ENST00000507376 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
COPS4-205ENST00000507376 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
COPS4-205ENST00000507376 KDM5AP29375 1690 aaKnown RBP14.38□□□□□ -0.11
COPS4-205ENST00000507376 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
COPS4-205ENST00000507376 NKTRP30414 1462 aaKnown RBP14.37□□□□□ -0.11
COPS4-205ENST00000507376 KIF15Q9NS87 1388 aa14.36□□□□□ -0.11
COPS4-205ENST00000507376 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
COPS4-205ENST00000507376 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
COPS4-205ENST00000507376 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
COPS4-205ENST00000507376 KANK4Q5T7N3 995 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms