RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 NPATQ14207 1427 aa30.41■■■□□ 2.46
SNX25-204ENST00000506896 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
SNX25-204ENST00000506896 ANKRD30AQ9BXX3 1397 aa30.37■■■□□ 2.45
SNX25-204ENST00000506896 PTPRKQ15262 1439 aa30.36■■■□□ 2.45
SNX25-204ENST00000506896 KIF15Q9NS87 1388 aa30.35■■■□□ 2.45
SNX25-204ENST00000506896 DUOX2Q9NRD8 1548 aa30.35■■■□□ 2.45
SNX25-204ENST00000506896 FAM135AQ9P2D6 1515 aa30.35■■■□□ 2.45
SNX25-204ENST00000506896 EIF2AK4Q9P2K8 1649 aaKnown RBP30.33■■■□□ 2.45
SNX25-204ENST00000506896 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
SNX25-204ENST00000506896 CHIC2Q9UKJ5 165 aa30.32■■■□□ 2.44
SNX25-204ENST00000506896 RNF17Q9BXT8 1623 aaKnown RBP30.32■■■□□ 2.44
SNX25-204ENST00000506896 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
SNX25-204ENST00000506896 WASHC2CQ9Y4E1 1318 aa30.31■■■□□ 2.44
SNX25-204ENST00000506896 KDM5DQ9BY66 1539 aa30.31■■■□□ 2.44
SNX25-204ENST00000506896 RRP7BPQ9NSQ0 103 aa30.3■■■□□ 2.44
SNX25-204ENST00000506896 STRCQ7RTU9 1775 aa30.28■■■□□ 2.44
SNX25-204ENST00000506896 ERBINQ96RT1 1412 aa30.28■■■□□ 2.44
SNX25-204ENST00000506896 MROH1Q8NDA8 1641 aa30.25■■■□□ 2.43
SNX25-204ENST00000506896 ROCK1Q13464 1354 aa30.24■■■□□ 2.43
SNX25-204ENST00000506896 PZPP20742 1482 aa30.23■■■□□ 2.43
SNX25-204ENST00000506896 FBXO31Q5XUX0 539 aaPredicted RBP30.22■■■□□ 2.43
SNX25-204ENST00000506896 ITGAEP38570 1179 aa30.2■■■□□ 2.43
SNX25-204ENST00000506896 MYO3AQ8NEV4 1616 aa30.2■■■□□ 2.43
SNX25-204ENST00000506896 ABCC3O15438 1527 aa30.2■■■□□ 2.42
SNX25-204ENST00000506896 ZNF142P52746 1687 aaPredicted RBP30.19■■■□□ 2.42
SNX25-204ENST00000506896 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
SNX25-204ENST00000506896 DMRT2Q9Y5R5 561 aa30.17■■■□□ 2.42
SNX25-204ENST00000506896 CEP170BQ9Y4F5 1589 aaPredicted RBP30.15■■■□□ 2.42
SNX25-204ENST00000506896 TNRQ92752 1358 aa30.14■■■□□ 2.41
SNX25-204ENST00000506896 ANKRD50Q9ULJ7 1429 aa30.13■■■□□ 2.41
SNX25-204ENST00000506896 PRDM15P57071 1507 aaPredicted RBP30.13■■■□□ 2.41
SNX25-204ENST00000506896 DEPDC5O75140 1603 aa30.13■■■□□ 2.41
SNX25-204ENST00000506896 CAMSAP1Q5T5Y3 1602 aa30.13■■■□□ 2.41
SNX25-204ENST00000506896 CEP152O94986 1710 aa30.13■■■□□ 2.41
SNX25-204ENST00000506896 A2ML1A8K2U0 1454 aa30.12■■■□□ 2.41
SNX25-204ENST00000506896 ILDR1Q86SU0 546 aaPredicted RBP30.1■■■□□ 2.41
SNX25-204ENST00000506896 PTPRTO14522 1441 aa30.1■■■□□ 2.41
SNX25-204ENST00000506896 CFAP65Q6ZU64 1925 aaKnown RBP30.07■■■□□ 2.4
SNX25-204ENST00000506896 PLA2R1Q13018 1463 aa30.06■■■□□ 2.4
SNX25-204ENST00000506896 SPATA31D1Q6ZQQ2 1576 aa30.06■■■□□ 2.4
SNX25-204ENST00000506896 KANK1Q14678 1352 aa30.05■■■□□ 2.4
SNX25-204ENST00000506896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.05■■■□□ 2.4
SNX25-204ENST00000506896 ARHGAP31Q2M1Z3 1444 aa30.05■■■□□ 2.4
SNX25-204ENST00000506896 VWDEQ8N2E2 1590 aa30.03■■■□□ 2.4
SNX25-204ENST00000506896 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
SNX25-204ENST00000506896 NLRP1Q9C000 1473 aa30.02■■■□□ 2.4
SNX25-204ENST00000506896 ERVK-7P63135 1459 aa30.01■■■□□ 2.4
SNX25-204ENST00000506896 PKD2Q13563 968 aa30.01■■■□□ 2.39
SNX25-204ENST00000506896 LMTK2Q8IWU2 1503 aa29.99■■■□□ 2.39
SNX25-204ENST00000506896 THEMISQ8N1K5 641 aaPredicted RBP29.95■■■□□ 2.39
SNX25-204ENST00000506896 CERKQ8TCT0 537 aa29.95■■■□□ 2.39
SNX25-204ENST00000506896 HFM1A2PYH4 1435 aa29.95■■■□□ 2.38
SNX25-204ENST00000506896 UNC13BO14795 1591 aa29.94■■■□□ 2.38
SNX25-204ENST00000506896 FBXO41Q8TF61 875 aa29.94■■■□□ 2.38
SNX25-204ENST00000506896 NAIPQ13075 1403 aa29.94■■■□□ 2.38
SNX25-204ENST00000506896 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
SNX25-204ENST00000506896 GCC2Q8IWJ2 1684 aa29.92■■■□□ 2.38
SNX25-204ENST00000506896 POLR1AO95602 1720 aaPredicted RBP29.87■■■□□ 2.37
SNX25-204ENST00000506896 LTBP4Q8N2S1 1624 aa29.86■■■□□ 2.37
SNX25-204ENST00000506896 EFCAB6Q5THR3 1501 aa29.86■■■□□ 2.37
SNX25-204ENST00000506896 ANKLE2Q86XL3 938 aa29.85■■■□□ 2.37
SNX25-204ENST00000506896 NEURL4Q96JN8 1562 aa29.84■■■□□ 2.37
SNX25-204ENST00000506896 UBR1Q8IWV7 1749 aa29.84■■■□□ 2.37
SNX25-204ENST00000506896 NUP155O75694 1391 aa29.82■■■□□ 2.36
SNX25-204ENST00000506896 IQGAP3Q86VI3 1631 aa29.82■■■□□ 2.36
SNX25-204ENST00000506896 NOS1P29475 1434 aa29.81■■■□□ 2.36
SNX25-204ENST00000506896 TET3O43151 1660 aa29.81■■■□□ 2.36
SNX25-204ENST00000506896 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
SNX25-204ENST00000506896 MED14O60244 1454 aa29.79■■■□□ 2.36
SNX25-204ENST00000506896 SYNMO15061 1565 aa29.77■■■□□ 2.36
SNX25-204ENST00000506896 IDI1Q13907 227 aa29.77■■■□□ 2.36
SNX25-204ENST00000506896 ZNF335Q9H4Z2 1342 aaPredicted RBP29.76■■■□□ 2.36
SNX25-204ENST00000506896 PIK3C2BO00750 1634 aa29.76■■■□□ 2.35
SNX25-204ENST00000506896 ARHGAP23Q9P227 1491 aa29.74■■■□□ 2.35
SNX25-204ENST00000506896 KDM5AP29375 1690 aaKnown RBP29.72■■■□□ 2.35
SNX25-204ENST00000506896 ACIN1Q9UKV3 1341 aaKnown RBP29.72■■■□□ 2.35
SNX25-204ENST00000506896 SLIT1O75093 1534 aa29.72■■■□□ 2.35
SNX25-204ENST00000506896 NPHP4O75161 1426 aaPredicted RBP29.71■■■□□ 2.35
SNX25-204ENST00000506896 SLC52A1Q9NWF4 448 aa29.71■■■□□ 2.35
SNX25-204ENST00000506896 LTKP29376 864 aa29.69■■■□□ 2.34
SNX25-204ENST00000506896 SETD5Q9C0A6 1442 aa29.69■■■□□ 2.34
SNX25-204ENST00000506896 E9PCH4 1651 aa29.69■■■□□ 2.34
SNX25-204ENST00000506896 IQSEC2Q5JU85 1478 aa29.68■■■□□ 2.34
SNX25-204ENST00000506896 IQGAP1P46940 1657 aa29.67■■■□□ 2.34
SNX25-204ENST00000506896 TRIM52Q96A61 297 aa29.67■■■□□ 2.34
SNX25-204ENST00000506896 TMEM2Q9UHN6 1383 aa29.65■■■□□ 2.34
SNX25-204ENST00000506896 TXNDC2Q86VQ3 553 aa29.65■■■□□ 2.34
SNX25-204ENST00000506896 STAG3Q9UJ98 1225 aa29.65■■■□□ 2.34
SNX25-204ENST00000506896 SCAF11Q99590 1463 aaKnown RBP29.65■■■□□ 2.34
SNX25-204ENST00000506896 ADGRB3O60242 1522 aa29.61■■■□□ 2.33
SNX25-204ENST00000506896 EID1Q9Y6B2 187 aa29.6■■■□□ 2.33
SNX25-204ENST00000506896 RAB3GAP2Q9H2M9 1393 aa29.56■■■□□ 2.32
SNX25-204ENST00000506896 SLC4A1APQ9BWU0 796 aaKnown RBP29.56■■■□□ 2.32
SNX25-204ENST00000506896 MYO5BQ9ULV0 1848 aa29.56■■■□□ 2.32
SNX25-204ENST00000506896 CPS1P31327 1500 aa29.55■■■□□ 2.32
SNX25-204ENST00000506896 TMEM131LA2VDJ0 1609 aa29.54■■■□□ 2.32
SNX25-204ENST00000506896 HRCP23327 699 aa29.52■■■□□ 2.32
SNX25-204ENST00000506896 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
SNX25-204ENST00000506896 SPHKAPQ2M3C7 1700 aa29.51■■■□□ 2.31
SNX25-204ENST00000506896 ZFYVE9O95405 1425 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms